New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2456087 | 105 (1.190) | 6 (0.070) | 6/240 | NT | 5.7% | coding (759/1464 nt) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase |
? | NC_002947 | = 2456111 | 96 (1.120) | coding (783/1464 nt) | gapB | glyceraldehyde‑3‑phosphate dehydrogenase |
GACGAAGCCAACAACACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2455935‑2456087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggg‑cAGCACCCGGGCAGGCCAGGTGCTGGCCCAGGCCGTCGGCGTCACGCCATACGCCGGTGTTGTCGACGATGAGCGCATTGTCGATGCCGTACTGGGTGTAGTCGACTTCGCTAGGGCTCTTGGCGTAGATAACCTGGATCAGGTTGCCGT < NC_002947/2456111‑2455963 GACGAAGCCAACAACACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTAAACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTG > 1:404545/1‑150 CGAAGCCAACAACACCATCACTGCCAACGGCACACTGACATCGGTTAATTACCCCAAGAGCCCTAGCGAAGTCGCCTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG < 1:1686445/150‑1 CGAAGCCAACAACACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG > 1:300330/1‑150 GAAGCCAACAACACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAGCAGACCTAGCGAAGTCGACTACACCCATTACTGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑C > 1:1451981/1‑150 GAAGCCAACAACACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑C < 1:277688/150‑1 CGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGGCCAGCACCCGGGCAGGCCAGGTGCTGG < 2:2085907/150‑1 CAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGT‑CAGCACCCGGGCAGGCCAGGTGCTGGCCCA < 1:2200463/150‑1 CCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑CAGCACCCGGGCAGGCCAGGTGCTGGCCCAG < 1:123386/100‑1 CCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑CAGCACCCGGGCAGGCCAGGTGCTGGCCCAG > 2:123386/1‑100 GACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑CAGCACCCGGGCAGGCCAGGTGCTGGCCCAGGCCGTCGGCGTCACGC > 2:935961/1‑103 GCGTGACGCCGACGGCCTGGGCCAGCACCTGGCCTGCCCGGGTGCT‑GCCCAGGCCGTCGGCGTCACGCCATACGCCGGTGTTGTCGACGATGAGCGCATTGTC > 1:935961/1‑103 GG‑CAGCACCCGGGCAGGCCAGGTGCTGGCCCAGGCCGTCGGCGTCACGCCATACGCCGGTGTTGTCGACGATGAGCGCATTGTCGATGCCGTACTGGGTGTAGTCGACTTCGCTAGGGCTCTTGGCGTAGATAACCTGGATTAGTTTGCC > 2:748857/1‑150 G‑CAGCACCCGGGCAGGCCAGGTGCTGGCCCAGGCCGTCGGCGTCACGCCATACGCCGGTGTTGTCGACGATGAGCGCATTGTCGATGCCGTACTGGGTGTAGTCGACTTCGCTAGGGCTCTTGGCGTAGATAACCTGGATCAGGTTGCCG > 1:1642939/1‑150 CAGCACCCGGGCAGGCCAGGTGCTGGCCCAGGCCGTCGGCGTCACGCCATACGCCGGTGTTGTCGACGATGAGCGCATTGTCGATGCCGTACTGGGTGTAGTCGACTTCGCTAGGGCTCTTGGCGTAGATAACCTGGATCAGGTTGCCGT < 1:1440724/150‑1 GACGAAGCCAACAACACCATCACTGCCAACGGCAACCTGATCCAGGTTATCTACGCCAAGAGCCCTAGCGAAGTCGACTACACCCAGTACGGCATCGACAATGCGCTCATCGTCGACAACACCGGCGTATGGCGTGACGCCGACGGCCTGGG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2455935‑2456087 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggg‑cAGCACCCGGGCAGGCCAGGTGCTGGCCCAGGCCGTCGGCGTCACGCCATACGCCGGTGTTGTCGACGATGAGCGCATTGTCGATGCCGTACTGGGTGTAGTCGACTTCGCTAGGGCTCTTGGCGTAGATAACCTGGATCAGGTTGCCGT < NC_002947/2456111‑2455963 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |