| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2464309 | 84 (0.950) | 8 (0.100) | 8/230 | NT | 9.2% | intergenic (+21/+19) | lolE/PP_2157 | lipoprotein releasing system permease/sensor histidine kinase |
| ? | NC_002947 | = 2464319 | 81 (0.990) | intergenic (+31/+9) | lolE/PP_2157 | lipoprotein releasing system permease/sensor histidine kinase | |||||
GCAGCTTGCCGTCGCAGTTGCAGTGGGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2464152‑2464309‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcctggggCGCTTTACGCCCCCAGGATCTCAGGCAGACATCAAACCGCCAGGCCAATCGCCGGCTGCACCTGCGACGCCCGGTAGGCCGGGTAAATGGTCGCCAGGAAACTCATCACCAGGCCGGCGGTGCAGATGATCGCCACATCCCCCCA < NC_002947/2464319‑2464175 GCAGCTTGCCGTCGCAGTTGCAGTGGGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGA > 1:621335/1‑150GCAGCTTGCCGTCGCAGTTGCAGTGGGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGA > 2:1139798/1‑150GCAGCTTGCCGTCGCAGTTGCAGTGGGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTAGCCTGGCGGTTTGATGTCTGCCTGAGA < 1:2177421/150‑1 TGCCGTCGCAGTTGCAGTGGGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGG < 2:621335/150‑1 GGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAGG > 2:1943062/1‑150 GGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAGG < 1:1162181/148‑1 GGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAGG > 2:1162181/1‑148 GGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAGGATC < 1:1943062/150‑1 GCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGA > 2:978682/1‑115 GCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGA < 1:978682/115‑1 TGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTG < 2:1859283/83‑1 TGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTG > 1:1859283/1‑83 CCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAG < 2:1800603/80‑1 CCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAG > 1:1800603/1‑80 GTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAGGATCTCAGGCAGACATCAAACCGCCAGG < 2:1692517/71‑1 GTTTGATGTCTGCCTGAGATCCTGGGGCGCTTTACGCCCCCAGGATCTCAGGCAGACATCAAACCGCCAGG > 1:1692517/1‑71 TGGGGCGCTTTACGCCCCCAGGATCTCAGGCAGACATCAAACCGCCAGGCCACTCGCCGGATGCACATGCGACGCCCGGTAGGCCGGGTAAATGGTCGCCAGGAAACTCCTCACCAGGCCGGCGGTGCAGATGATCGCCACATCCCCCCA > 2:335970/1‑150 GCAGCTTGCCGTCGCAGTTGCAGTGGGGGGATGTGGCGATCATCTGCACCGCCGGCCTGGTGATGAGTTTCCTGGCGACCATTTACCCGGCCTACCGGGCGTCGCAGGTGCAGCCGGCGATTGGCCTGGCGGTTTGATGTCTGCCTGAGATCCTGGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2464152‑2464309‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atcctggggCGCTTTACGCCCCCAGGATCTCAGGCAGACATCAAACCGCCAGGCCAATCGCCGGCTGCACCTGCGACGCCCGGTAGGCCGGGTAAATGGTCGCCAGGAAACTCATCACCAGGCCGGCGGTGCAGATGATCGCCACATCCCCCCA < NC_002947/2464319‑2464175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |