| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 2635482 | 72 (0.820) | 4 (0.050) | 6/224 | NT | 5.3% | intergenic (+29/+88) | PP_2304/PP_2305 | peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein |
| ? | NC_002947 | = 2635487 | 79 (0.990) | intergenic (+34/+83) | PP_2304/PP_2305 | peptidyl‑prolyl cis‑trans isomerase D/hypothetical protein | |||||
ACGAAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGCCG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2635323‑2635482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacaggccg‑cACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCGGCAAAGTCCTGCTGGCCAGCACGTGACGCGAGGTAGCGGCGAATCTGCTGCTTCTCTTCGTCGGTG < NC_002947/2635487‑2635339 attAAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGCGTTCGTTGCATGAAGA > 2:1788251/4‑150ACGAAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGA < 1:1995727/150‑1 cgcAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAA > 1:2332088/4‑150 GAAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAA > 2:461548/1‑150 GAAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAA > 1:545043/1‑150 GGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAG < 2:2332088/150‑1 CGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGC < 1:167603/150‑1 CGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGC < 1:2134532/150‑1 GCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGCC < 1:461548/150‑1 CACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGC > 1:855963/1‑141 CACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGC < 2:855963/141‑1 AGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTACATGAAGAAACAGGCCG‑CACGAGGCGGCCTGTTTC > 1:1273309/1‑150 GCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGCCG‑CACGAGGCGGCCTGTTT > 1:234148/1‑110 GCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGCCG‑CACGAGGCGGCCTGTTT < 2:234148/110‑1 CCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGCCGCCTCG‑TGCGGCCTGTTTCTTCATGTAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCGGCAAAGTCCTGCTGGCCAGCACGTGACG > 2:1273309/1‑150 ATGAAGAAACAGGCCGCCTCG‑TGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCG < 1:1119971/100‑1 ATGAAGAAACAGGCCGCCTCG‑TGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCG > 2:1119971/1‑100 GAAACAGGCCG‑CACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAG < 2:1787946/93‑1 GAAACAGGCCG‑CACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAG > 1:1787946/1‑93 GCCG‑CACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCGGCAAAGTCCTGCTGGCCAGCACGTGACGCGAGGTAGCGGCGAATCTGCTGCTTCTCTTCGTC > 1:948071/1‑150 G‑CACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCGGCAAAGTCCTGCTGGCCAGCACGTGACGCGAGGTAGCGGCGAATCTGCTGCTTCTCTTCGTCGGT > 2:545043/1‑150 CACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCGGCAAAGTCCTGCTGGCCAGCACGTGACGCGAGGTAGCGGCGAATCTGCTGCTTCTCTTCGTCGGTG < 2:948071/150‑1 ACGAAGGCGCTGCCGCCACCGACGAAGAGAAGCAGCAGATTCGCCGCTACCTCGCGTCACGTGCTGGCCAGCAGGACTTTGCCGCTTACCGCAAGCAGCTGGAAGCCAATGCAGACATCACCCGTTACTAAGGTGTTCGTTGCATGAAGAAACAGGCCG‑C‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2635323‑2635482‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaaacaggccg‑cACGAGGCGGCCTGTTTCTTCATGCAACGAACACCTTAGTAACGGGTGATGTCTGCATTGGCTTCCAGCTGCTTGCGGTAAGCGGCAAAGTCCTGCTGGCCAGCACGTGACGCGAGGTAGCGGCGAATCTGCTGCTTCTCTTCGTCGGTG < NC_002947/2635487‑2635339 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |