| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3676073 | 68 (0.770) | 6 (0.080) | 6/220 | NT | 8.8% | intergenic (+37/+55) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 3676096 | 64 (0.820) | intergenic (+60/+32) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein | |||||
TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3675911‑3676073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG < NC_002947/3676096‑3675952 TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTC < 1:1477056/150‑1TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTC > 2:1503573/1‑150 AGGCCGATAAAAGGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCA > 2:1518600/1‑150 TTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCCCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACAT > 2:958484/1‑150 TGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCCCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCG < 1:958484/150‑1 CCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCC < 1:1024361/115‑1 CCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCC > 2:1024361/1‑115 GGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCC < 1:1223976/72‑1 GGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCC > 2:1223976/1‑72 GCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGA < 1:865942/113‑1 GCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGA > 2:865942/1‑113 GCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGG < 1:1055037/150‑1 GCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGG < 2:2162140/150‑1 tctGCTGGTTCCCAGGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG < 1:1064942/147‑1 TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3675911‑3676073‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG < NC_002947/3676096‑3675952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |