New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3676073 | 68 (0.770) | 6 (0.080) | 6/220 | NT | 8.8% | intergenic (+37/+55) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein |
? | NC_002947 | = 3676096 | 64 (0.820) | intergenic (+60/+32) | PP_3240/PP_5592 | hypothetical protein/hypothetical protein |
TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3675911‑3676073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG < NC_002947/3676096‑3675952 TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTC < 1:1477056/150‑1 TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTC > 2:1503573/1‑150 AGGCCGATAAAAGGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCA > 2:1518600/1‑150 TTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCCCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACAT > 2:958484/1‑150 TGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCCCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCG < 1:958484/150‑1 CCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCC < 1:1024361/115‑1 CCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCC > 2:1024361/1‑115 GGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCC < 1:1223976/72‑1 GGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCC > 2:1223976/1‑72 GCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGA < 1:865942/113‑1 GCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGA > 2:865942/1‑113 GCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGG < 1:1055037/150‑1 GCAAGCTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGG < 2:2162140/150‑1 tctGCTGGTTCCCAGGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG < 1:1064942/147‑1 TCGGCCGAGCAGGCCGATAAAAAGGCCGACCTTGGTTTCGACCCCGACTCCCCGGATGCCGAAGACCCTCAAGTCGACCCACAGGGGCCGGCCAAGCCGCCTAGAGACATTGAGAAAAAGGAGTAAACCACGGCCTTGATTACCGGTCTCGTCGCCGGCAAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3675911‑3676073 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgtcgccggcaagcTGGTTCCCAAGGGATCGCACATGGCTTGCCGGCGACGAGACCGGTAATCAAGGCCGTGGTTTACTCCTTTTTCTCAATGTCTCTAGGCGGCTTGGCCGGCCCCTGTGGGTCGACTTGAGGGTCTTCGGCATCCGGGGAGTCGGGG < NC_002947/3676096‑3675952 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |