| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3708303 | 128 (1.450) | 11 (0.130) | 10/232 | NT | 8.4% | coding (614/1563 nt) | actP‑III | acetate permease |
| ? | NC_002947 | = 3708336 | 119 (1.440) | coding (581/1563 nt) | actP‑III | acetate permease | |||||
AAAGCGCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3708152‑3708303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggcctTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT < NC_002947/3708336‑3708189 AAAGCGCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGC > 2:2189167/1‑150 GGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCC‑TC‑‑GGTGCTCAAGCACTTCGGCTTCAGCAC < 1:469894/150‑1 CCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTG > 2:834920/1‑150 CCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCC‑TC‑‑GGTGCTCAAGCACTTCGGCTTCAGCACCGA < 1:1520727/136‑1 CCAAACCGAGGGAAATGGCGTCCACCGGGGTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCC‑TC‑‑GGTGCTCAAGCACTTCGGCTTCAGCACCGA > 2:1520727/1‑136 CAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGC < 1:834920/150‑1 CAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCC‑TC‑‑GGTGCTCAAGCACTTCGGCTTCAGCACC > 2:591353/1‑133 CAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCC‑TC‑‑GGTGCTCAAGCACTTCGGCTTCAGCACC < 1:591353/133‑1 TTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTG > 1:199170/1‑121 TTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTG < 2:199170/121‑1 AACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTT > 1:2241515/1‑114 AACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTT < 2:2241515/114‑1 TGGCCTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGA < 1:139560/150‑1 CTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT > 2:1631653/1‑150 CTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT > 2:1217057/1‑150 CTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT > 1:1960283/1‑150 CTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT > 2:670307/1‑150 CTTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT < 1:1217057/150‑1 AAAGCGCATCAGGATATGCGGCAGGCCAGCGGTGCCGAACATCATGCCCAAACCGAGGGAAATGGCGTCCACCGGGTTGGACAACAAGCCGCCTGGGGCCATGATCGCCTGGCCCTTGGCATGCACGGCCACCGCACTGGCAAACATGGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3708152‑3708303‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catggcctTCATGGTGCTCAAGCACTTCGGCTTCAGCACCGAGGCCATGTTTGCCAGTGCGGTGGCCGTGCATGCCAAGGGCCAGGCGATCATGGCCCCAGGCGGCTTGTTGTCCAACCCGGTGGACGCCATTTCCCTCGGTTTGGGCATGATGTT < NC_002947/3708336‑3708189 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |