| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3919334 | 69 (0.780) | 7 (0.090) | 6/230 | NT | 10.1% | coding (3072/3129 nt) | mexB | multidrug resistance protein MexB |
| ? | NC_002947 | = 3919346 | 61 (0.750) | coding (3084/3129 nt) | mexB | multidrug resistance protein MexB | |||||
GCTGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3919178‑3919334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgcctgGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGC < NC_002947/3919346‑3919202 GCTGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGAT > 1:1522429/1‑150 TGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGC > 1:157618/1‑150 GCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC < 2:1597573/150‑1 TTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGCGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG > 1:1775688/1‑150 TCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCCCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGC > 1:436537/1‑138 TCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCCCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGC < 2:436537/138‑1 CCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC < 1:1551282/150‑1 GCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC > 2:86391/1‑99 GCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGC < 1:86391/99‑1 GCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCA < 1:1945509/117‑1 GCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCA > 2:1945509/1‑117 TCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCACCA > 2:595132/1‑97 TCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGCATCACCA < 1:595132/97‑1 TCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC > 1:929095/1‑78 TCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTGGCGTCGCCCGGACAGGCGC < 2:929095/78‑1 ATGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAG > 2:955407/1‑150 ATGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAG > 2:1701420/1‑150 TGCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGG < 1:232685/150‑1 GCGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCGCGGTGGCAATCTCCTGCTGGCGTTCAGAGCTTGCGCCGCTGGCGATGGCCAGGG < 2:2017964/150‑1 CGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGG < 1:683704/150‑1 CGCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGG < 1:1587422/150‑1 GCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCCCTGGCCATCGCCAGCGGC < 2:448587/150‑1 GCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTG < 2:1459328/117‑1 GCCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTG > 1:1459328/1‑117 CCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCT < 2:1367480/115‑1 CCTGGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCT > 1:1367480/1‑115 GCTGGCGTTCATCCTCGGCGTGGTGCCCCTGGCCATCGCCAGCGGCGCAAGCTCTGCCAGCCAGCAGGCGATTGGCACCGGGGTGATCGGCGGCATGCTCAGCGCCACCCTGGCGGTGGTGTTCGTGCCGGTGTTCTTCGTGGTGGTGATGCGCCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3919178‑3919334‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgcgcctgGCGTCGCCCGGACAGGCGCATCACCACCACGAAGAACACCGGCACGAACACCACCGCCAGGGTGGCGCTGAGCATGCCGCCGATCACCCCGGTGCCAATCGCCTGCTGGCTGGCAGAGCTTGCGCCGCTGGCGATGGCCAGGGGC < NC_002947/3919346‑3919202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |