| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4143231 = | 75 (0.850) | 4 (0.050) | 4/236 | NT | 5.5% | coding (1320/1482 nt) | PP_3646 | aldehyde dehydrogenase family protein |
| ? | NC_002947 | 4143269 = | 67 (0.800) | coding (1358/1482 nt) | PP_3646 | aldehyde dehydrogenase family protein | |||||
CACGAACGGGTCGGGCATCGGCGCGGTGGACAAGTTGATCCACACGGTCTTCAGCTCGGTATAGGCCAGCACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4143384‑4143231‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggtgGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCATCGATTCGGTGCTGGCCTATACCGAGCTGAAGACCGTGTGGATCAACTTGTCCACCGCGCCGATGCCCGACCCGTTCGTGATGCGCTAGGAGGAAC > NC_002947/4143269‑4143400 CACGAACGGGTCGGGCATCGGCGCGGGGGACAAGTTGATCCACACGGTCTTCAGCTCGGTATAGGCCAGCACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTA > 2:159645/1‑150 CGGGTCGGGCATCGGCGCGGTGGACAAGTTGATCCACACGGTCTTCAGCTCGGTATAGGCCAGCACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTAGGTttt < 1:1012220/150‑4 GTTGATCCACACGGTCTTCAGCTCGGTATAGGCCAGTACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTA < 1:1146028/117‑1 GTTGATCCACACGGTCTTCAGCTCGGTATAGGCCAGTACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTA > 2:1146028/1‑117 ATAGGCCAGCACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTA > 1:2164431/1‑90 ATAGGCCAGCACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTA < 2:2164431/90‑1 GCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTAGGTG > 1:701664/1‑55 GCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTAGGTG < 2:701664/55‑1 ACCACCTATCGGTGCCATGGCCGACACGGCACGGTAGGTGGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCATCGATTCGGTGCTGGCCTATACCGAGCTGAAGACCGTGTGGATCAACTTGTCCACCGCGCCGATGCCCGACCCG > 2:1863920/1‑150 ATCGGTGCCATGGCCGACACGGCACGGTAGGTGGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCAT > 1:731640/1‑70 ATCGGTGCCATGGCCGACACGGCACGGTAGGTGGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCAT < 2:731640/70‑1 GACACGGCACGGTAGGTGGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCATCGATTCGGTGCTGGCCTATACCGAGCTGAAGACCGTGTGGATCAACTTGTCCACCGCGCCGATGCCCGACCCGTTCGTGATGCGCTAGGAGGAAC < 1:1863920/150‑1 GTGGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCATCGATTCGGTGCTGGC < 1:1397311/55‑1 GTGGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCATCGATTCGGTGCTGGC > 2:1397311/1‑55 CACGAACGGGTCGGGCATCGGCGCGGTGGACAAGTTGATCCACACGGTCTTCAGCTCGGTATAGGCCAGCACCGAATCGATGCCGCTCTCACGGCCGTAGCCGCTGTTCTTGAAACCACCTATCGGTGCCATGGCCGACACGGCACGGTAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4143384‑4143231‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taggtgGTTTCAAGAACAGCGGCTACGGCCGTGAGAGCGGCATCGATTCGGTGCTGGCCTATACCGAGCTGAAGACCGTGTGGATCAACTTGTCCACCGCGCCGATGCCCGACCCGTTCGTGATGCGCTAGGAGGAAC > NC_002947/4143269‑4143400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |