| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4491957 | 65 (0.740) | 7 (0.080) | 6/234 | NT | 10.3% | intergenic (‑50/‑205) | PP_3982/PP_3983 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 4491968 | 61 (0.730) | intergenic (‑61/‑194) | PP_3982/PP_3983 | hypothetical protein/hypothetical protein | |||||
CGCCGCGCGTCATCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4491825‑4491957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggggcTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCATGG < NC_002947/4491968‑4491820 CGCCGCGCGTCATCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCA < 2:2059660/150‑1 CCGCGCGTCATCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGG < 1:2004423/128‑1 CCGCGCGTCATCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGG > 2:2004423/1‑128 TCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCACGACAG > 1:1535114/1‑144 TCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCACGACAG < 2:1535114/144‑1 TCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGG < 2:872722/106‑1 TCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGG > 1:872722/1‑106 GAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGG > 2:1307713/1‑94 GAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGG < 1:1307713/94‑1 AAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCACGACAGA > 2:1300341/1‑119 AAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCACGACAGA < 1:1300341/119‑1 GCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTG < 2:1375915/89‑1 GCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTG > 1:1375915/1‑89 AAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCACGACAGA > 1:452774/1‑106 AAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGCTCCTAAGTAACGCCCCACGACAGA < 2:452774/106‑1 GGGCTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCA > 2:2192095/1‑150 GGCTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCAT > 2:2071939/1‑150 GGCTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCAT < 2:68313/150‑1 GCTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCATG < 1:255264/150‑1 GCTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCATG < 2:2075212/150‑1 CTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCATGG < 1:2143436/150‑1 CGCCGCGCGTCATCCGATGCAGCAGTCGCAGGTTCGTGAAGCCAACGTAAGAAATGCTGATAGTCGTGTTCCGCAGATGCCATCCGTGCCTCCCCAGGCTCAATCTCAATCTTTGCTAGCTCTGTCGTGGGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4491825‑4491957‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggggcTCCTAAGTAACGCCCCACGACAGAGCTAGCAAAGATTGAGATTGAGCCTGGGGAGGCACGGATGGCATCTGCGGAACACGACTATCAGCATTTCTTACGTTGGCTTCACGAACCTGCGACTGCTGCATCGGATGACGCGCGGCGCATGG < NC_002947/4491968‑4491820 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |