| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4641793 | 75 (0.850) | 4 (0.050) | 4/236 | NT | 5.1% | coding (56/1383 nt) | gabP‑IV | gamma‑aminobutyrate permease |
| ? | NC_002947 | = 4641798 | 76 (0.910) | coding (51/1383 nt) | gabP‑IV | gamma‑aminobutyrate permease | |||||
CATTTCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4641639‑4641793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgacTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTGCCACCGCCGGCCCGGCCATCCTCATCTCCTACGCCATGACTGGCCTGCTGGTCTTGCTGGTGATGCGCATG < NC_002947/4641798‑4641651 CATTTCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAAC < 2:1909868/150‑1CATTTCACCCAGCATGCGCATCAACGGCAAGGCGAGCAGGCGAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAAC > 1:1806614/1‑150 TTTCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCT > 1:1791189/1‑150 TTTCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCT > 2:1575388/1‑150 TTTCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCT > 2:1799060/1‑150 TCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGA < 2:506155/150‑1 TCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGA < 2:415242/150‑1 CACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGAC < 2:2234361/150‑1 ACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAAC > 2:1862586/1‑144 ACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAAC < 1:1862586/144‑1 AGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAAC > 1:454898/1‑116 AGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAAC < 2:454898/116‑1 CAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGACTTCCCGTCAGGTTTCCATG < 1:582891/91‑1 CAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGACTTCCCGTCAGGTTTCCATG > 2:582891/1‑91 ACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGACTTCCCGTCAGGTTTCCAT > 2:2100721/1‑66 ACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGACTTCCCGTCAGGTTTCCAT < 1:2100721/66‑1 CCTGACTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTGCCACCGCCGGCCCGGCCATCCTCATCTCCTACGCCATGACTGGCCTGCTGGTCTTGCTGGTGATGag > 2:515601/1‑148 CTGACTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTG > 2:1926787/1‑82 CTGACTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTG < 1:1926787/82‑1 TGACTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTGCCACCGCCGGCCCGGCCATCCTCATCTCCTACGCCATGACTGGCCTGCTGGTCTTGCTGGTGATGCGCA > 2:1695328/1‑150 ACTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTGCCACCGCCGGCCCGGCCATCCTCATCTCCTACGCCATGACTGGCCTGCTGGTCTTGCTGGTGATGCGCATG > 2:265718/1‑150 CATTTCACCCAGCATGCGCATCACCAGCAAGACCAGCAGGCCAGTCATGGCGTAGGAGATGAGGATGGCCGGGCCGGCGGTGGCAATGGCGTTGGAGGACCCGATGAACAGCCCGGCGCCGATGATGCCGGCAATGGAGATCATGGAAACCTGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4641639‑4641793‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgacTTCCCGTCAGGTTTCCATGATCTCCATTGCCGGCATCATCGGCGCCGGGCTGTTCATCGGGTCCTCCAACGCCATTGCCACCGCCGGCCCGGCCATCCTCATCTCCTACGCCATGACTGGCCTGCTGGTCTTGCTGGTGATGCGCATG < NC_002947/4641798‑4641651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |