New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4849026 =	99 (1.120)	5 (0.060)	4/238	NT	5.1%	coding (281/1383 nt)	hemN	oxygen‑independent coproporphyrinogen III dehydrogenase
	?	NC_002947	4849051 =	90 (1.060)					coding (306/1383 nt)	hemN	oxygen‑independent coproporphyrinogen III dehydrogenase

CGCCGGAATCGTCGTCCAGCAGGTGGAAGTGCTGGCGCAGGGTGGCCATCAGCTGGCGCAGTTCCACATGGCTGAGGAAGGTCGGTGTGCCGCCGCCAAAATGCAACTGTTCAACACGTTGTTTAGGGTCCAGGTGGCAGGCGACCAGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4849178‑4849026 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaCCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACCTTCCTCAGCCATGTGGAACTGCGCCAGCTGATGGCCACCCTGCGCCAGCACTTCCACCTGCTGGACGACGATTCCGGCGACTACGGCATCGAGATCGA  >  NC_002947/4849051‑4849197                                                                                                                                                                                                                                                                                                              CGCCGGAATCGTCGTCCAGCAGGTGGAAGTGCTGGCGCAGGGTGGCCATCAGCTGGCGCAGTTCCACATGGCTGAGGAAGGTCGGTGTGCCGCCGCCAAAATGCAACTGTTCAACACGTTGTTTAGGGTCCAGGTGGCAGGCGACCAGCT                                                                                                                                                        <  1:1372359/150‑1  GCCGGAATCGTCGTCCAGCAGGTGGAAGTGCTGGCGCAGGGTGGCCATCAGCTGGCGCAGTTCCACATGGCTGAGGAAGGTCGGTGTGCCGCCGCCAAAATGCAACTGTTCAACACGTTGTTTAGGGTCCAGGTGGCAGGCGACCAGCTG                                                                                                                                                       >  2:1273669/1‑150                                                                                                                          TTTAGGGTCCAGGTGGCAGGCGACCAGCTGGACCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACCTTCCTCAGCCATGTGGAACTGCGCCAGCTGATGGCC                                                                >  1:832385/1‑117                                                                                                                          TTTAGGGTCCAGGTGGCAGGCGACCAGCTGGACCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACCTTCCTCAGCCATGTGGAACTGCGCCAGCTGATGGCC                                                                <  2:832385/117‑1                                                                                                                                GTCCAGGTGGCAGGCGACCAGCTGGACCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACCTTCCTCAGCCATGTGGAACTGCGCCAGCTGATGGCCACCCTGCGCCAGCACTTCCACCTGCTGGACGACGATTCC                         >  1:219435/1‑150                                                                                                                                GTCCAGGTGGCAGGCGACCAGCTGGACCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACC                                                                                                    <  1:1396236/75‑1                                                                                                                                GTCCAGGTGGCAGGCGACCAGCTGGACCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACC                                                                                                    >  2:1396236/1‑75                                                                                                                                                       GGACCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACCTTCCTCAGCCATGTGGAACTGCGCCAGCTGATGGCCACCCTGCGCCAGCACTTCCACCTGCTGGACGACGATTCCGGCGACTACGGCATCGAGATCGA  >  1:2326861/1‑150                                                                                                                                                                                                                                                                                                              CGCCGGAATCGTCGTCCAGCAGGTGGAAGTGCTGGCGCAGGGTGGCCATCAGCTGGCGCAGTTCCACATGGCTGAGGAAGGTCGGTGTGCCGCCGCCAAAATGCAACTGTTCAACACGTTGTTTAGGGTCCAGGTGGCAGGCGACCAGCTGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4849178‑4849026 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggaCCCTAAACAACGTGTTGAACAGTTGCATTTTGGCGGCGGCACACCGACCTTCCTCAGCCATGTGGAACTGCGCCAGCTGATGGCCACCCTGCGCCAGCACTTCCACCTGCTGGACGACGATTCCGGCGACTACGGCATCGAGATCGA  >  NC_002947/4849051‑4849197

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.