| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4890813 | 67 (0.760) | 7 (0.090) | 7/230 | NT | 10.3% | intergenic (+168/‑71) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase |
| ? | NC_002947 | = 4890835 | 60 (0.730) | intergenic (+190/‑49) | glxR/ttuD | 2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase | |||||
GGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4890664‑4890813‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccctggAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGT < NC_002947/4890835‑4890691 GGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG < 1:1252106/150‑1 GCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGA > 1:234470/1‑150 CTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAAC > 1:287862/1‑150 CGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACGCCCGCCCCTGGAACTGCCT > 1:1943152/1‑150 CTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCA < 2:2084840/150‑1 CCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGG < 2:234470/150‑1 AAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGC < 2:287862/150‑1 CAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACGCCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCT < 2:1943152/150‑1 TTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG < 1:582120/77‑1 TTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG > 2:582120/1‑77 CTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTT < 1:691132/84‑1 CTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTT > 2:691132/1‑84 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGG > 1:94171/1‑150 CCCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGG < 2:545993/150‑1 CCTGGAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGTCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCTTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGT < 1:1536857/150‑1 GGCCTCTTCGCGGGTAAACCCGCTCCTACCAAAGACCGCACAATCGCTCAGAGCTGTGCATGTAGGAGCGGGCTTGCCCGCGAAGAAGCCAACGCCGTTGAACCTGCGACCACAGGCCCAATGGTGGCATCGAGCAACACCCGCCCCTGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4890664‑4890813‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccctggAACTGCCTCCGTGCAGGCCGAACCAGGGGCGGGTGTTGCTCGATGCCACCATTGGGCCTGTGGTCGCAGGTTCAACGGCGTTGGCTTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGT < NC_002947/4890835‑4890691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |