| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 4917840 | 103 (1.170) | 7 (0.080) | 6/240 | NT | 6.5% | coding (194/1557 nt) | PP_4328 | hypothetical protein |
| ? | NC_002947 | = 4917851 | 101 (1.180) | coding (205/1557 nt) | PP_4328 | hypothetical protein | |||||
AGCCAAGCCATGAAGGCGGGCATGACCGGCGATCTGCTGCGCCTGATCCAGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4917689‑4917840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaCGCCGTTGGCCTGCATCAGCCGTAGCACCAGCTGAAAGTCCTGGCCCGTCTGACGCAACGATAAAACCTCGGCTTGCGCGGTTTCGCCAGGAGCTAGCAACCCAGGCTGCGCCTGGATCAGGCGCAGCAGATCGCCGGTCATGCCCG < NC_002947/4917851‑4917705 AGCCAAGCCATGAAGGCGGGCATGACCGGCGATCTGCTGCGCCTGATCCAGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATG > 1:1446692/1‑150 CCAAGCCATGAAGGCGGGCATGACCGGCGATCTGCTGCGCCTGATCCAGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCA > 1:78804/1‑150 GATCCAGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCACGCCGTTGGCCTGCAT < 1:1857983/124‑1 GATCCAGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCACGCCGTTGGCCTGCAT > 2:1857983/1‑124 AGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCACGCCGTTGGCCTGCA < 1:1293697/118‑1 AGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGGTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCACGCCGTTGGCCTGCA > 2:1293697/1‑118 GTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCACGCCGTTGGCCTGCAT < 1:744751/59‑1 GTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCACGCCGTTGGCCTGCAT > 2:744751/1‑59 TTTCAGCTGGTGCTACGGCTGATGCAGGCCAACGGCGTGCATCAGCCGTAGCACCAGCTGAAAGTCCTGGCCCGTCTGACGCAACGATAAAACCTCGGCTTGCGCGGTTTCGCCAGGAGCTAGCAACCCAGGCTGCGCCTGGATCAGGCG > 1:1907287/1‑150 GCACGCCGTTGGCCTGCATCAGCCGTAGCACCAGCTGAAAGTCCTGGCCCGTCTGACGCAACGATAAAACCTCGGCTTGCGCGGTTTCGCCAGGAGCTAGCAACCCAGGCTGCGCCTGGATCAGGCGCAGCAGATCGCCGGTCATGCCCG > 1:563117/1‑150 CACGCCGTTGGCCTGCATCAGCCGTAGCACCAGCTGAAAGTCCTGGCCCGTCTGACGCAACGATAAAACCTCGGCTTGCGCGGTTTCGC > 1:2277297/1‑89 CACGCCGTTGGCCTGCATCAGCCGTAGCACCAGCTGAAAGTCCTGGCCCGTCTGACGCAACGATAAAACCTCGGCTTGCGCGGTTTCGC < 2:2277297/89‑1 AGCCAAGCCATGAAGGCGGGCATGACCGGCGATCTGCTGCGCCTGATCCAGGCGCAGCCTGGGTTGCTAGCTCCTGGCGAAACCGCGCAAGCCGAGGTTTTATCGTTGCGTCAGACGGGCCAGGACTTTCAGCTGGTGCTACGGCTGATGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4917689‑4917840‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcaCGCCGTTGGCCTGCATCAGCCGTAGCACCAGCTGAAAGTCCTGGCCCGTCTGACGCAACGATAAAACCTCGGCTTGCGCGGTTTCGCCAGGAGCTAGCAACCCAGGCTGCGCCTGGATCAGGCGCAGCAGATCGCCGGTCATGCCCG < NC_002947/4917851‑4917705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |