| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5077327 = | 107 (1.210) | 7 (0.080) | 6/236 | NT | 6.8% | intergenic (+74/+34) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter |
| ? | NC_002947 | 5077353 = | 89 (1.060) | intergenic (+100/+8) | PP_4470/mgtE | Arc domain‑containing transcriptional regulator/magnesium transporter | |||||
GATGACCTTGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5077481‑5077327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggaGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATC > NC_002947/5077353‑5077499 GATGACCTTGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTACCCGTTGTACTCCGATTCTCCCTGTGTGATCAATCCCGC > 2:611658/1‑150 ATGACCTTGGCCCGTTTGGGGCGCGACCGTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCA < 2:2126749/150‑1 GGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAA < 1:1161826/150‑1 GATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAG < 1:375789/104‑1 GATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAG > 2:375789/1‑104 TTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAAC > 2:1204410/1‑92 TTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGCGGGATTGTTCCCACAGGGAGGATTGGCTTACAAC < 1:1204410/92‑1 TCCCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGG > 2:1252558/1‑150 TCCCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAA > 2:1028262/1‑73 TCCCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAA < 1:1028262/73‑1 CCTGTGGGAACAATCCCGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGAACATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCagatcgg > 1:1676485/1‑143 CGCAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGC > 1:447524/1‑150 CAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCCGCCCAAGGCAGTTGAAGAAACCACCGCTGTCGGCCATCGCATTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCC < 1:2272325/150‑1 CAGGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCC > 2:1542524/1‑150 ggtAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCAT > 1:1548087/4‑150 GGGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATAAGCACGCCCAT < 2:1161826/150‑1 GGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATC < 1:1495992/150‑1 GGAGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATC > 1:937899/1‑150 GATGACCTTGGCCCGCTTGGGGCGCGACCCTGCGATGGGGGCGAGTGTGATGATCACTGCTGTGACCGACAGCGGTGGTTTCTTCATCTTCCTTGGGCTGGCCACGCTGTTCCTGTTGTAAGCCAATCCTCCCTGTGGGAACAATCCCGCAGGGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5077481‑5077327‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagggaGGATTGGCTTACAACAGGAACAGCGTGGCCAGCCCAAGGAAGATGAAGAAACCACCGCTGTCGGTCACAGCAGTGATCATCACACTCGCCCCCATCGCAGGGTCGCGCCCCAAGCGGGCCAAGGTCATCGGGATCAGCACGCCCATC > NC_002947/5077353‑5077499 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |