New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 5342644 | 69 (0.780) | 5 (0.060) | 5/228 | NT | 6.9% | intergenic (+42/‑165) | panC/pgi‑II | pantothenate synthetase/glucose 6‑phosphate isomerase |
? | NC_002947 | = 5342666 | 72 (0.890) | intergenic (+64/‑143) | panC/pgi‑II | pantothenate synthetase/glucose 6‑phosphate isomerase |
GCGCCCGGCAGTGATCAATGATCGAGACCTGGTGGTGATTGCGGCGGCTTACCTGGGTAACACGCGGTTGATCGACAACCTCTACCTGCATTTGGAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5342491‑5342644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagcccgcCCCTACAGGTAAACGTGCAGGAGCGGGCTTGCCCGCGAATGGGCTGCAAGGCAGCCCAAGACCGTTATGCGGTCTTCTCTTCCAAATGCAGGTAGAGGTTGTCGATCAACCGCGTGTTACCCAGGTAAGCCGCCGCAATCACCACCAG < NC_002947/5342666‑5342519 GCGCCCGGCAGTGATCAATGATCGAGACCTGGTGGTGATTGCGGCGGCTTACCTGGGTAACACGCGGTTGATCGACAACCTCTACCTGCATTTGGAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGC > 1:1968379/1‑150 TCGACAACCTCTACCTGCATTTGGAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGAGCAAGCCCGCCCCTACAGGTAAACGTGCAGGAGCGGG < 2:837497/110‑1 TGCATTTGGAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGCCCGCCCCTACAGGTAAACGTGCAGGAGCGG < 1:1256144/94‑1 TGCATTTGGAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGCCCGCCCCTACAGGTAAACGTGCAGGAGCGG > 2:1256144/1‑94 GAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGCCCGCCCCTACAGGTAAACGTGCAGGAGCGGG < 1:883770/87‑1 GAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGCCCGCCCCTACAGGTAAACGTGCAGGAGCGGG > 2:883770/1‑87 CCCGCTCCTGCACGTTTACCTGTAGGGGCGGGCTTGCTCGCGAATGGGCTGCAAGGCAGCCCAAGACCGTTATGCGGTCTTCTCTTCCAAATGCAGGTAGAGGTTGTCGA < 1:837497/110‑1 CCCGCCCCTACAGGTAAACGTGCAGGAGCGGGCTTGCCCGCGAATGGGCTGCAAGGCAGCCCAAGACCGTTATGCGGTCTTCTCTTCCAAATGCAGGTAGAGGTTGTCGATCAACCGCGTGTTACCCAGGTAAGCCGCCGCAATCACCAC > 2:103687/1‑150 CGCCCCTACAGGTAAACGTGCAGGAGCGGGCTTGCCCGCGAATGGGCTGCAAGGCAGCCCAAGACCGTTATGCGGTCTTCTCTTCCAAATGCAGGTAGAGGTTGTCGATCAACCGCGTGTTACCCAGGTAAGCCGCCGCAATCACCACCA < 2:2013501/150‑1 GCCCCTACAGGTAAACGGGCAGGTGCGGGCTTGCCCGCGAATGGGCTGCAAGGCAGCCCAAGACCGTTATGCGGTCTTCTCTTCCAAATGCAGGTAGAGGTTGTCGATCAACCGCGTGTTACCCAGGTAAGCCGCCGCAATCACCACCAG < 1:1622283/150‑1 GCGCCCGGCAGTGATCAATGATCGAGACCTGGTGGTGATTGCGGCGGCTTACCTGGGTAACACGCGGTTGATCGACAACCTCTACCTGCATTTGGAAGAGAAGACCGCATAACGGTCTTGGGCTGCCTTGCAGCCCATTCGCGGGCAAGCCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5342491‑5342644 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagcccgcCCCTACAGGTAAACGTGCAGGAGCGGGCTTGCCCGCGAATGGGCTGCAAGGCAGCCCAAGACCGTTATGCGGTCTTCTCTTCCAAATGCAGGTAGAGGTTGTCGATCAACCGCGTGTTACCCAGGTAAGCCGCCGCAATCACCACCAG < NC_002947/5342666‑5342519 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |