| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5518359 | 72 (0.820) | 4 (0.050) | 4/232 | NT | 5.3% | coding (270/1068 nt) | PP_4850 | membrane protein |
| ? | NC_002947 | = 5518430 | 77 (0.930) | coding (199/1068 nt) | PP_4850 | membrane protein | |||||
ACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5518206‑5518359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgaccCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGGCGGAAAACCCCGGCGCCTCGCT < NC_002947/5518430‑5518282 ACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCTCCTTGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCT < 1:1008204/150‑1 GCAGGCAGGTAGCACCCGATGAAAGGGGGCAACTGGCTGCGGGCGCGCTCGACCAAGGCCATGAACTTGTCCAGGGAGGCGCCGGGGTTTTCCGCCTCGTGAAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACC > 2:1895275/1‑150 ATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTG > 2:1908552/1‑150 GGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCT > 2:153289/1‑150 CGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGT < 1:153289/150‑1 GTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGAC < 1:1908552/150‑1 ACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGGCGGAAAACCCCGGCGCCTCG > 2:369800/1‑150 ACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCT < 1:286681/86‑1 ACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCT > 2:286681/1‑86 ACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGC > 1:169438/1‑81 ACCCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGC < 2:169438/81‑1 CCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCAGTGCCTTCAGCTGCCTACTGCTCGAGGCGGAAAACCCCGTCGACTCGCT > 2:876392/1‑150 ACTGGCAGGCAGGTAGCCCTCGATGAAAGGGGGCAACTGGCTGCGGGCTCGCTCGACCAAGGCCATGAACTTGTCCAGCGAGGCGCCGGGGTTTTCCGCCTCGTGCAGCAGGAAGCTGAAGGCACCGGCAATCAGCAGTGTCAGGGTGCTGACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5518206‑5518359‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgctgaccCCGCGCCTGCAACCGCTGCTTGCTGGCCAACGCGCGCGCTGGCTGGCCGTGGCGTTGCTCGGCACGCTGGTGGTCAGCACCCTGACACTGCTGATTGCCGGTGCCTTCAGCTTCCTGCTGCACGAGGCGGAAAACCCCGGCGCCTCGCT < NC_002947/5518430‑5518282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |