| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5679875 | 88 (1.000) | 8 (0.100) | 8/216 | NT | 10.0% | intergenic (+42/‑122) | bioA/rsmE | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase |
| ? | NC_002947 | = 5679947 | 68 (0.890) | intergenic (+114/‑50) | bioA/rsmE | adenosylmethionine‑‑8‑amino‑7‑oxononanoate aminotransferase BioA/16S rRNA (uracil(1498)‑N(3))‑methyltransferase | |||||
ACCCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5679711‑5679875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGGAAG < NC_002947/5679947‑5679803 ACCCCCGAGCAGATCGACTTCCTTGCCGAAGTGGGCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTC > 1:431557/1‑150ACCCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTC > 1:431597/1‑150 CCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGTCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCT > 1:2109037/1‑150 CCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCT > 2:704350/1‑150 CCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCT > 1:413903/1‑150 CCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCT < 1:205465/150‑1 CCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGAAATTCGCCACACCACTTTTCCT > 2:1785050/1‑150 CCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGT < 2:289525/150‑1 CCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTGCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGT < 1:283080/150‑1 CGACCAGATCGACTTCCTCGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTG < 2:1786896/150‑1 AGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGC < 1:246555/150‑1 GATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCG > 1:2326442/1‑150 GATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTC > 1:540890/1‑139 GATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTC < 2:540890/139‑1 ATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGG > 2:1709316/1‑150 ATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCAACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGG > 2:611385/1‑150 TCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCCCCCCGACTTCCACGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGG > 1:1080429/1‑150 TCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGG > 1:225445/1‑150 TCGACTTACTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGG < 1:1338695/150‑1 CGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGC < 2:2162021/150‑1 CCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGG < 1:1752174/143‑1 CCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGG > 2:1752174/1‑143 TTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGAT > 2:933470/1‑150 CGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGATGCGT > 1:1678279/1‑150 ATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTC > 2:185348/1‑105 ATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTC < 1:185348/105‑1 ATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCC > 1:890712/1‑150 GTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCT < 1:933470/150‑1 AACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGC < 2:890712/150‑1 CTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGATGCGTTGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCC < 2:1678279/150‑1 CGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTG < 1:611385/150‑1 CGGGCTAGGCCCGGCAATTCGCCACACCACTCTCCCTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATAAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTG < 2:2271109/150‑1 CTGTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCTGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGCATTGCCGGGCCTAGCCCGGGTCGCGGAAGTC > 1:515864/1‑150 GTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGG < 2:1376883/150‑1 GTGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGG < 2:978227/150‑1 TGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGG < 1:1664371/150‑1 TGGGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGCCTCGCCCGCTCCCACAGGAAAAGTGGTGGGGCGCATTGCCGGGCCTAGCCCGGGTCGCGCAAGTGGGG < 2:91720/150‑1 GGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGT < 1:2065512/150‑1 GGAGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGT > 2:1270253/1‑150 AGCGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGG < 1:1270253/150‑1 CGGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGGAA < 2:1156713/150‑1 GGGCGTGTCGATGCGTCGAACCGCCGCGAATCATGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGGAAG > 2:1575719/1‑150 GGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCGGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGGAAG > 2:1251090/1‑150 GGGCGTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCGGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGGAAG > 2:1250963/1‑150 ACCCCCGAGCAGATCGACTTCCTTGCCGAAGTGGCCAGCGAAGGCATCGATATCGCCACCCGCGACAGCGTCAGTGTCGCAGTACCGGCCAACTTCCACCCCGACTTCCGCGACCCGGGCTAGGCCCGGCAATTCGCCACACCACTTTTCCTGTGGGAGCGGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5679711‑5679875‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgtgggagcgggcgTGTCGATGCGTCGAACCGCCGCGAATCAGGCGCCGCGGTGCCTGGCAAGGGCTTCGCCCTTGTTCGCGGGCTCGCCCGCTCCCACAGGAAAAGTGGTGTGGCGAATTGCCGGGCCTAGCCCGGGTCGCGGAAGTCGGGGTGGAAG < NC_002947/5679947‑5679803 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |