New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 5724316 = | 53 (0.600) | 16 (0.230) | 12/200 | NT | 26.7% | intergenic (‑162/+132) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
? | NC_002947 | 5724383 = | 45 (0.630) | intergenic (‑229/+65) | PP_5024/opgH | amino acid ABC transporter substrate‑binding protein/glucans biosynthesis glucosyltransferase H |
GAAAACGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5724483‑5724316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttcacccgcgaagAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACG > NC_002947/5724383‑5724530 GAAAACGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGA > 2:1106555/1‑150 agAACGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCCCCTACCAGGGATACACATGCCCTTGTAGGAG > 1:689032/3‑150 AAACGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGC < 2:932444/150‑1 ACGCGGGCCAACCGAGCCTCGTCGGCGCGTGAGCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGG < 2:476511/150‑1 CGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGTGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGG < 2:1274930/150‑1 CGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGTAGCGGG < 2:2061958/150‑1 CGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGAGCCCCGCTGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATCCCCTTGTAAGAGCGGG > 2:115916/1‑150 GCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACATATGCCCTTGTAGGAGCGGGg > 1:899672/1‑149 GCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGT > 1:2237957/1‑150 CCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCG > 2:973626/1‑150 GTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTA < 1:856307/107‑1 GTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTA > 2:856307/1‑107 CCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCG < 1:1751032/100‑1 CCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCG > 2:1751032/1‑100 GGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGA < 2:877682/68‑1 GGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGA > 1:877682/1‑68 GCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTA > 1:2260934/1‑42 GCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTA < 2:2260934/42‑1 GTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAA > 1:1781126/1‑58 GTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAA < 2:1781126/58‑1 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCGGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGG < 1:188258/83‑1 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCGGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGG > 2:188258/1‑83 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAA > 2:852378/1‑123 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAA < 1:852378/123‑1 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGC < 1:2206165/94‑1 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGC > 2:2206165/1‑94 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCG < 2:1558790/90‑1 CCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCG > 1:1558790/1‑90 GCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTT > 1:547904/1‑150 TACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAAC > 1:1789852/1‑103 TACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAAC < 2:1789852/103‑1 TACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGG < 2:117703/84‑1 TACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGG > 1:117703/1‑84 CCAGGGATACACATGCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGAC > 2:1412699/1‑121 CCAGGGATACACATGCCCTGGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGAC < 1:1412699/121‑1 GGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAGCGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAA > 2:1974178/1‑150 GTAGGAGCGGTTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGGAGGGCGGTTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAA < 1:718622/150‑1 GTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCG > 1:1017062/1‑145 GTAGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCG < 2:1017062/145‑1 AGGAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATG > 2:1922359/1‑150 GAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGGGACGAAACGCCGAGAACAGACGCGATCAAGCGCCGACGAGGGTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCG > 1:1055363/1‑150 GAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCC < 1:418580/83‑1 GAGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCC > 2:418580/1‑83 AGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGG > 2:658915/1‑150 AGCGGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGG < 2:547904/150‑1 GGGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTC < 1:1922359/150‑1 GGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTTGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCA > 2:578013/1‑150 GGTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCA > 2:1572245/1‑150 GTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGG > 1:690561/1‑118 GTTCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGG < 2:690561/118‑1 TCACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTG < 1:932444/150‑1 ACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTT < 1:658915/150‑1 ACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGT > 1:1149876/1‑149 ACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGT < 2:1149876/149‑1 ACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAG > 1:1260231/1‑90 ACCCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAG < 2:1260231/90‑1 CCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGA > 1:2078347/1‑150 CCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTT < 1:86131/148‑1 CCGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTT > 2:86131/1‑148 CGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGAT > 2:584414/1‑150 CGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGG > 1:1971487/1‑44 CGCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGG < 2:1971487/44‑1 GCGAAGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATC < 1:486051/150‑1 AGAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACG < 1:1563773/150‑1 GAAAACGCAGGCCAACCGAGCCTCGTCGGCGCTTGATCGGGTCTGTTCGCGGCGGTTCGGCGCCCCGATGAACCCGCCCTACGGGGCGCATGACCGGGCCTCTTCGCGGGTGAACCCGCTCCTACCAGGGATACACATGCCCTTGTAGGAGCGGGTTCACCCGCGAAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5724483‑5724316 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtaggagcgggttcacccgcgaagAGGCCCGGTCATGCGCCCCGTAGGGCGGGTTCATCGGGGCGCCGAACCGCCGCGAACAGACCCGATCAAGCGCCGACGAGGCTCGGTTGGCCTGCGTTTTCAGGGTGCAACGGCAACAGCGGCGAATGCGGGTCATTGTTGATCGACG > NC_002947/5724383‑5724530 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |