| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5762590 = | 72 (0.820) | 5 (0.060) | 5/234 | NT | 7.0% | intergenic (+50/‑91) | gpmI/PP_5057 | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase |
| ? | NC_002947 | 5762622 = | 65 (0.780) | intergenic (+82/‑59) | gpmI/PP_5057 | 2,3‑bisphosphoglycerate‑independent phosphoglycerate mutase/M23/M37 family peptidase | |||||
CGCTCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5762745‑5762590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtttTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGGAT > NC_002947/5762622‑5762770 CGCTCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGG < 1:1147916/150‑1 CTCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGC > 2:1941063/1‑150 aCATCGGCGAAGGCAGGGCGGAACAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGTATGGGGTTTGGCGTACAAAGGATGGAGAAGGGCCTAGTATGCCCGCCTGGGCAGGCAAAACAACCGCCTCGCTGCGGATGCAGGGGGGCG < 2:390331/149‑1 TCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCG > 2:41462/1‑150 ATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTT < 2:991328/150‑1 TCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACTAAGGATGGAGACTGGCCTAGTATGCCTGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT > 1:2273605/1‑150 TTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCCCCCTGCATCCGCAGCGAGGCGTTTTTTTTGCCTGC > 1:2055218/1‑98 GCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAA > 2:2055218/1‑98 CCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTAC > 2:1331170/1‑76 CCTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTAC < 1:1331170/76‑1 CTCGCTGCGGATGCAGGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCG > 1:719978/1‑150 GGGGGGCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCA < 2:719978/150‑1 GCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCCGCGGCAAC < 1:1374811/150‑1 GCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGC < 2:2044861/74‑1 GCGTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGC > 1:2044861/1‑74 GTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCT < 1:807527/104‑1 GTTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCT > 2:807527/1‑104 TTTTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGG > 1:681737/1‑150 TTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGGAT < 2:1546291/150‑1 CGCTCATCGGCGAAGGCCGGGCTGAGCAGGCAAGACAGGGCTAGGAGGATCAGGGCGCGAAGCATGGGGTTTGGCGTACCAAGGATGGAGACTGGCCTAGTATGCCCGCCTGGGCAGGCAAAAAAAACGCCTCGCTGCGGATGCAGGGGGGCGTTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5762745‑5762590‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcgtttTTTTTGCCTGCCCAGGCGGGCATACTAGGCCAGTCTCCATCCTTGGTACGCCAAACCCCATGCTTCGCGCCCTGATCCTCCTAGCCCTGTCTTGCCTGCTCAGCCCGGCCTTCGCCGATGAGCGTGCGCAGACCCAGCAGCAACTGGAT > NC_002947/5762622‑5762770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |