| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5765441 | 106 (1.200) | 11 (0.130) | 6/234 | NT | 9.7% | coding (41/768 nt) | PP_5059 | hypothetical protein |
| ? | NC_002947 | = 5765457 | 105 (1.260) | coding (57/768 nt) | PP_5059 | hypothetical protein | |||||
CCCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5765287‑5765441‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCCTT < NC_002947/5765457‑5765309 CCCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATG < 2:2281120/150‑1 CCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGCTGG > 1:263892/1‑150 CCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGG > 1:1370055/1‑150 GACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAATGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCC < 1:106964/150‑1 ACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGCGATGTGGTCTTGGTCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCG < 2:1483876/150‑1 ACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCG < 1:792575/150‑1 CCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA < 1:4601/150‑1 TTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA > 1:1723233/1‑135 TTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA < 1:1819192/135‑1 TTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA > 2:1819192/1‑135 TTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA < 2:1723233/135‑1 AGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA > 2:278887/1‑122 AGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGTTGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA < 1:278887/122‑1 CACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCG < 1:2079927/92‑1 CACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCG > 2:2079927/1‑92 AAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGG < 1:1497245/99‑1 AAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGG > 2:1497245/1‑99 ATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATG > 2:362006/1‑62 ATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATG < 1:362006/62‑1 CAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA > 2:1552013/1‑88 CAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGGTGCCGCTTGCGCGATTCCGGCCATCA < 1:1552013/88‑1 CGGTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCC < 2:1179123/150‑1 CGGTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCC < 1:1297338/150‑1 GGTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTG > 2:1219573/1‑80 GGTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTG < 1:1219573/80‑1 GTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCCTT < 2:1960877/150‑1 CCCGACCGGCAGCAGCAAGCGCAAGGAACGCCCGCAGGATGACGACTTCCAGCTGAGCCAGGCACTGAGCCTGCTCAAGGGCCTGAACATCACCAAGGGCGACTGAGCCACCCTATGCGTTATCTGCTGTGTCTGTTGTTTTGCCTGATGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5765287‑5765441‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggccggTGCCGCTTGCGCGATTCCGGCCATCAGGCAAAACAACAGACACAGCAGATAACGCATAGGGTGGCTCAGTCGCCCTTGGTGATGTTCAGGCCCTTGAGCAGGCTCAGTGCCTGGCTCAGCTGGAAGTCGTCATCCTGCGGGCGTTCCTT < NC_002947/5765457‑5765309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |