New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6081924 =	80 (0.910)	5 (0.060)	5/232	NT	6.2%	intergenic (‑26/+83)	PP_5334/purK	membrane protein/5‑(carboxyamino)imidazole ribonucleotide synthase
	?	NC_002947	6081958 =	76 (0.920)					intergenic (‑60/+49)	PP_5334/purK	membrane protein/5‑(carboxyamino)imidazole ribonucleotide synthase

CCACCCTGCGCTGCCCTGACATGGCCACCCTCGAGCGCAAGATTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGGCTTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6082080‑6081924 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttgttGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTCCTACCTTGCGGCCAAC  >  NC_002947/6081958‑6082102                                                                                                                                                                                                                                                                                                                  CCACCCTGCGCTGCCCTGACATGGCCACCCTCGAGCGCAAGATTGACGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTG                                                                                                                                                          <  1:256682/150‑1  CACCCTGCGCTGCCCTGACATGGCCACCCTCGAGCGCAAGATTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGG                                                                                                                                                         >  1:500790/1‑150  CACCCTGCGCTGCCCTGACATGGCCACCCTCGAGCGCAAGATTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGG                                                                                                                                                         <  2:2022205/150‑1        GCGCTGCCCTGACATGGCCACCCTCGAGCGCAAGATTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGGCTTGTT                                                                                                                                                   <  2:2000160/150‑1                                           TTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCAAAGCCTA‑GAC‑GGGCTTCGGCTTGTTGCCATATTCAGAGGGC                                                                                                                                   <  1:209747/131‑1                                           TTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCAAAGCC‑T‑AGACGGGCTTCGGCTTGTTGCCATATTCAGAGGGC                                                                                                                                   >  2:209747/1‑131                                               CGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCAAAGCCTA‑GAC‑GGGCTTCGGCTTGTTGCCATATTCAGAG                                                                                                                                      >  2:1108410/1‑124                                               CGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCAAAGCC‑TAGAC‑GGGCTTCGGCTTGTTGCCATATTCAGAG                                                                                                                                      <  1:1108410/124‑1                                                                  AGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGG                                                                                                                                                         <  1:451957/86‑1                                                                  AGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGG                                                                                                                                                         >  2:451957/1‑86                                                                                                                               AAGCCGAAGCC‑C‑GTCTAGGCTTTGGCTTGTTGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCACTCTTGCGCTCGAGGGTGGCCCTGTCAGGCCAGCGCAGG                            >  2:763063/1‑150                                                                                                                                                           TTGTTGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTCCTACCTTGCGGCCAAC  >  2:1518893/1‑150                                                                                                                                                              TTGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTCCTACCTT           <  1:2148560/138‑1                                                                                                                                                              TTGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTCCTACCTT           >  2:2148560/1‑138                                                                                                                                                               TGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTC                  >  1:1781776/1‑130                                                                                                                                                               TGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTC                  <  2:1781776/130‑1                                                                                                                                                                                                                                                                                                                  CCACCCTGCGCTGCCCTGACATGGCCACCCTCGAGCGCAAGATTGCCGAAGTAGAGGCGCTGATCAGCAACTGATCGGGCTTCGAATCGAACTTCTGCAAGCGGCATGCCCTCTGAATATGGCAACAAGCCGAAGCC‑C‑GTCTAGGCTTTGGCTTGTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/6082080‑6081924 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcttgttGCCATATTCAGAGGGCATGCCGCTTGCAGAAGTTCGATTCGAAGCCCGATCAGTTGCTGATCAGCGCCTCTACTTCGGCAATCTTGCGCTCGAGGGTGGCCATGTCAGGGCAGCGCAGGGTGGCGTGTCCTACCTTGCGGCCAAC  >  NC_002947/6081958‑6082102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.