| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 74499 | 120 (1.360) | 5 (0.070) | 3/200 | NT | 6.3% | intergenic (+87/+11) | PP_0063/PP_0064 | lipid A biosynthesis lauroyl acyltransferase/hypothetical protein |
| ? | NC_002947 | 5897872 = | 51 (0.720) | intergenic (‑216/+18) | PP_5172/PP_5173 | hypothetical protein/RND family transporter | |||||
Only 100 of 150 total aligned reads displayed.
CAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGCAGCTGATAG > NC_002947/74350‑74648 | cagTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGGACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTAC < 2:2145413‑M1/150‑1 (MQ=255)cagTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTAC < 1:1401461‑M1/150‑1 (MQ=255) aTGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGAc > 1:595150/1‑150 (MQ=255) gtgGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAggg < 2:2275257/146‑1 (MQ=255) tgGAGCATGAGGCGCTTGAATAAGCAGCCGGTTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCTTCGGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACcgc < 1:1795174/150‑1 (MQ=37) tgGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACcgc > 2:704672/1‑150 (MQ=255) gAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGt > 2:1206125/1‑150 (MQ=255) gAGCAGGAAGCGCGTCAAGAAGCGCCCGGCTGGCGAGCCGCGGTGATATTAAGCCATTCATCGTCGTCTGTAGGAACGGTTTTACCCGCAAATGCGATGTTGGATTCACCGACGTATTAGCGCATACGCCCGCTCCTACAGGGACCGCGt < 2:817077/150‑1 (MQ=255) gAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAATCCCGCTCCTACAGGGACCGCGTCAAGcc < 2:446024/150‑1 (MQ=255) gAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGcc < 1:467633/150‑1 (MQ=255) gcgcTTCTTGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGAt > 2:1877901/1‑150 (MQ=255) tCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCtt < 2:595150/150‑1 (MQ=255) cAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTg < 1:2050013/150‑1 (MQ=255) aagaagCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGt < 1:1048837/150‑1 (MQ=255) gaagCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGc > 1:1309351/1‑137 (MQ=255) gaagCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGc < 2:1309351/137‑1 (MQ=255) gaagCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTc > 1:1336499/1‑150 (MQ=255) ccGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGcttct < 1:790436/150‑1 (MQ=255) cGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGcttctt < 1:2251100/150‑1 (MQ=255) cTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTga < 2:1396968/149‑1 (MQ=255) tGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTATGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTgaga > 2:1346985/1‑150 (MQ=255) cGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGaaaa < 1:35418/150‑1 (MQ=255) gAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGCTGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGCACCGCGTCAAGACGATGTCTTGTTCAGCTTCTTGAGaaata > 1:96961/1‑148 (MQ=255) ccGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGcttct > 2:297321/1‑138 (MQ=255) gTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCTATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCt < 2:1344447/150‑1 (MQ=255) gTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGt > 1:765899/1‑143 (MQ=255) gTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGt < 2:765899/143‑1 (MQ=255) ttAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCtttt < 1:1206125/150‑1 (MQ=255) ccATTCACCTTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGc < 1:1854169/150‑1 (MQ=255) aTTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCt > 2:782962/1‑150 (MQ=255) aTTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCt < 2:10169/150‑1 (MQ=255) aCCGTCCTCTGTAGGAGCGGGTTTACCCGCGAATGCTAGGTTGGATTCACCGACGTATTCGCGTGGCAGCTGATGCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCtt < 1:632891/150‑1 (MQ=255) aCCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCtt > 1:575281/1‑150 (MQ=255) aCCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCtt > 2:387317/1‑150 (MQ=255) aCCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTAC < 1:1542715‑M1/80‑1 (MQ=255) cgtggtctGTAGGCACGGTTTTACCCGCGAAGGCGATGTTGGATTCAACGACGAATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAAAAAAAAGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGt < 2:506014/145‑1 (MQ=37) cGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCtt < 2:1019750/103‑1 (MQ=255) cGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCtt > 1:1019750/1‑103 (MQ=255) ctctGTAGGACCGGGTTTACCCGCGAAAGTGCTGTTGTAGGCACCGACGTATTCGCGGGTAACCACGCTTTGTCATGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCAcc < 1:405157/150‑1 (MQ=255) ctctGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCAcc < 2:209948/150‑1 (MQ=255) tctGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGCGACAACCGTTCATTTCTTTTTCGGCCTGCTTGTCACCa > 2:1463672/1‑150 (MQ=255) tctGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTCTTCGGCATCCTTGTAACCa > 2:1768654/1‑150 (MQ=255) ctGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTTACTCCGCTCCTACAGGTACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCAt < 2:191531/150‑1 (MQ=255) ctGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCAt > 1:981033/1‑150 (MQ=255) tAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATggg < 1:704672/150‑1 (MQ=255) aaCGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACAGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTg > 2:1526920/1‑150 (MQ=255) gggTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGaaaaa > 2:1305756/1‑107 (MQ=255) tttACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGcgccgc > 1:2114441/1‑150 (MQ=255) cccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACg > 1:1840870/1‑150 (MQ=255) ccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAAc < 1:907259/100‑1 (MQ=255) ccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCAtt > 2:193032/1‑107 (MQ=255) ccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTc < 2:2276695/115‑1 (MQ=255) ccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTc > 1:2276695/1‑115 (MQ=255) ccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGa > 2:2304918/1‑150 (MQ=255) ccGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGa > 2:242579/1‑150 (MQ=255) ccGCGAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggt > 1:2048471‑M1/1‑54 (MQ=255) cgcgAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATgg < 1:492863/133‑1 (MQ=255) cgcgAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATgg > 2:492863/1‑133 (MQ=255) gcgAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcg > 1:2101125‑M1/1‑52 (MQ=255) gcgAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACcagaggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgt < 2:798360‑M1/102‑51 (MQ=255) gcgAATGCGATGGTGCATCGACCACCGTATTCGCGGGTAAACCCGCTCCTACcagaggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgt > 1:798360‑M1/1‑52 (MQ=255) gAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATccc < 2:1840870/150‑1 (MQ=255) aaTGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCg > 1:1876990/1‑150 (MQ=255) tGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTgc < 1:505437/133‑1 (MQ=255) cGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCtt < 1:1346985/150‑1 (MQ=255) cGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCtt < 2:981033/150‑1 (MQ=255) gATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTc < 2:2114441/150‑1 (MQ=255) aTGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGTGCCCGGCTTcc < 2:513660/150‑1 (MQ=255) gTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGTGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCAt > 1:1486925/1‑119 (MQ=255) gTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGTGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCAt < 2:1486925/119‑1 (MQ=255) gTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCa < 1:1877901/150‑1 (MQ=255) gATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCt > 1:659919/1‑150 (MQ=255) tCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTg < 1:250501/150‑1 (MQ=255) cACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTgc < 2:2071729/150‑1 (MQ=255) aCCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTgcg > 2:1443490/1‑150 (MQ=255) aCCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCCCCACGATCCCGTCTTCCCACGCTTTgcg > 2:520056/1‑150 (MQ=255) ccGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTATTTTTCGGCCTGCTTGTCACCATGGGCATGCGCCGCCACGATCACGTATACCAACGCTTTgagc < 2:96961/150‑1 (MQ=255) ttCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGcgccgccgc > 1:1672500/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcgccacgatgatcccgccaatcatggcgtaggcc > 1:1404067‑M1/1‑20 (MQ=255) gcgGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAg > 2:1881477/1‑150 (MQ=255) gcgGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAg > 2:1656209/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCt > 2:1530509/1‑150 (MQ=255) aCCCGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcgccacgatgatcccgccaatcatggcgtaggccatggggcc > 1:2245163‑M1/1‑12 (MQ=255) aCCCGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcgccacgat > 1:1386759‑M1/1‑12 (MQ=255) aCCCGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcag > 1:1691608‑M1/1‑12 (MQ=255) aCCCGCTCCTACcaggggccatatgggccttcaggcgtgtttccgcggctcgcggatcttgtaccaggccacgtacagcgccggcag < 2:1691608‑M1/87‑76 (MQ=255) cccGCTCCTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcgccacgatgatcccgccaatcatggcgtaggccatggggccc < 1:1484388‑M1/150‑140 (MQ=255) cccGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATc > 2:1858716/1‑109 (MQ=255) cccGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGc < 1:450587/146‑1 (MQ=255) cccGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGc > 2:450587/1‑146 (MQ=255) cccGCTCCTACAGGGACAGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTg < 1:1526920/150‑1 (MQ=255) ccGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGc > 2:769743/1‑150 (MQ=255) ccGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGc > 2:1823921/1‑150 (MQ=255) cTACcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcgccacgatgatcccgccaatcatggcgtaggccatggggccccagaaca < 1:201433‑M1/150‑147 (MQ=255) cTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGACATACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGCAGCTGa < 1:994607/150‑1 (MQ=255) aCcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtacagcgccggcaggaacagcagcgtcagcaaggtcgccacgatgatcccgccaatcatggcgtaggccatggggccccagaacacc > 1:1672977‑M1/1‑2 (MQ=255) aCcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtaca < 2:1174428‑M1/67‑66 (MQ=255) aCcaggggccatatgggccttcaggcgtgtttctgcggctcgcggatcttgtaccaggccacgtaca > 1:1174428‑M1/1‑2 (MQ=255) aCAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGCAGCTGATa > 1:1985843/1‑150 (MQ=255) cAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGCAGCTGATAg < 2:468364/150‑1 (MQ=255) | CAGTACATGTGGAGCATGAAGCGCTTCAAGAAGCGCCCGGCTGGCGAGCCGCGCTGGTATTAAGCCATTCACCGTCCTCTGTAGGAACGGGTTTACCCGCGAATGCGATGTTGGATTCACCGACGTATTCGCGGGTAAACCCGCTCCTACAGGGACCGCGTCAAGCCGATGTCTTGTTCAGCTTCTTGAGAAAAACGGTCATTTCTTTTTCGGCCTGCTTGTCACCATGGGCCTGCGCCGCCACGATCCCGTCTTCCCACGCTTTGCGCGCCGCCGCCAGCTCGCCCTGCAGCTGATAG > NC_002947/74350‑74648 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |