New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 65023374 (0.840)4 (0.050) 4/238 NT 5.6% intergenic (‑74/+26) accB/aroQ‑I acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase
?NC_002947 = 650249 65 (0.770)intergenic (‑90/+10) accB/aroQ‑I acetyl‑CoA carboxylase biotin carboxyl carrier subunit/type II 3‑dehydroquinate dehydratase

CCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACG  >  NC_002947/650096‑650381
                                                                                                                                         |                                                                                                                                                    
ccAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAg                                                                                                                                          >  1:927033/1‑150 (MQ=255)
ccAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAg                                                                                                                                          <  1:625604/150‑1 (MQ=255)
 cAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAgg                                                                                                                                         >  2:84372/1‑150 (MQ=255)
  aGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGACCACTTAGGc                                                                                                                                        >  2:963783/1‑150 (MQ=255)
   tttCGTCGATGCCGCACTCTTCCATCAGCTCGATCAGTTTCTTGACTTGCCGGATATCCATTAATCATCAACTCCCAAACGTTCGGTGTGGGGGCGAAATACAGAAAACGTATCTGAAACCTTTCTCTCGAACGCCGGCCTACTTAGGcc                                                                                                                                       >  2:632828/2‑150 (MQ=255)
   gTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATCTCCATTAACCATCAACTCCCAAAGGTTCGGTCAGGGGCCGAAATACCACCAGCCTACCTGTGATTTTTCTCGCTAACCCCGGCCCACTTAGGcc                                                                                                                                       >  2:1550015/1‑150 (MQ=255)
      cgtcgATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg                                                                                                                                    >  1:1018254‑M2/1‑148 (MQ=255)
      cgtcgATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg                                                                                                                                    >  1:2234042‑M2/1‑148 (MQ=255)
          gATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGttt                                                                                                                                >  2:1954452/1‑150 (MQ=255)
            tGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc                                                                                                                              >  2:338537/1‑150 (MQ=255)
             gCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc                                                                                                                              <  2:1944182/149‑1 (MQ=255)
             gCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtc                                                                                                                              >  1:1944182/1‑149 (MQ=255)
              ccAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcat                                                                                                                            >  2:88552/1‑150 (MQ=255)
               cAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcatc                                                                                                                           >  1:218783/1‑150 (MQ=255)
                  aCTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGATTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCAtt                                                                                                                        <  2:661703/150‑1 (MQ=255)
                   ctctTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCAttt                                                                                                                       <  1:757883/150‑1 (MQ=255)
                        ccAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCt                                                                                                                  <  1:84372/150‑1 (MQ=255)
                         cagcagCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCtg                                                                                                                 >  2:309831/1‑150 (MQ=255)
                              gcTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCTAGGGTTTTCATCAGTTGGGCTGTGCGt                                                                                                            <  1:1472104/150‑1 (MQ=255)
                               cTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGTGTTTTCATCATTTGGGCTGTGCGtt                                                                                                           <  1:1038540/150‑1 (MQ=255)
                               cTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGtt                                                                                                           <  2:1705228/150‑1 (MQ=255)
                                   aTCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCa                                                                                                       <  2:571664/150‑1 (MQ=255)
                                    tCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg                                                                                                                                    <  1:294494‑M2/120‑3 (MQ=255)
                                    tCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAgg                                                                                                                                    >  2:294494‑M2/1‑118 (MQ=255)
                                     cAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGc                                                                                                     <  1:309831/150‑1 (MQ=255)
                                         ttCTTGACTTTACGGATATCCATTAATCCTCAACGCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAgt                                                                                                 <  1:312434/150‑1 (MQ=255)
                                            ttGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGATCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAgttgt                                                                                              >  2:676939/1‑150 (MQ=255)
                                                      ggATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCgg                                                                                    >  1:2105542/1‑150 (MQ=255)
                                                       gATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGa                                                                                   <  2:2105542/150‑1 (MQ=255)
                                                       gATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGa                                                                                   <  2:1108882/150‑1 (MQ=255)
                                                           tCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTcc                                                                               >  1:1416100/1‑150 (MQ=255)
                                                            ccATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGtt                                                                                                           >  1:362611/1‑121 (MQ=255)
                                                            ccATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGtt                                                                                                           <  2:362611/121‑1 (MQ=255)
                                                            ccATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCa                                                                              >  1:501060/1‑150 (MQ=255)
                                                              aTTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTGTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg                                                                             >  2:28945/1‑149 (MQ=255)
                                                              aTTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAgg                                                                            <  1:1954452/150‑1 (MQ=255)
                                                              aTTAATCATCAACTCCCAAAGGTCCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAg                                                                             <  1:28945/149‑1 (MQ=255)
                                                                tAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGc                                                                          <  1:88552/150‑1 (MQ=255)
                                                                  atcatcAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCa                                                                        >  1:1381393/1‑150 (MQ=255)
                                                                     atcaACTCCCAAAGGTTCGGTCAGGGGGCGTAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGc                                                                     >  1:427432/1‑150 (MQ=255)
                                                                       caACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGa                                                                   >  2:1947582/1‑150 (MQ=255)
                                                                            cccAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAAcc                                                              >  2:2168773/1‑150 (MQ=255)
                                                                             ccAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTTAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCg                                                             >  2:280418/1‑150 (MQ=255)
                                                                               aaaGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAg                                                                                                                                          >  2:1019541/1‑71 (MQ=255)
                                                                               aaaGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAg                                                                                                                                          <  1:1019541/71‑1 (MQ=255)
                                                                               aaaGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCt                                                           >  2:934625/1‑150 (MQ=255)
                                                                               aaaGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCt                                                           >  1:2060246/1‑150 (MQ=255)
                                                                               aaaGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCt                                                           <  1:676939/150‑1 (MQ=255)
                                                                                    ttCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGgcgc                                                      >  1:2298875/1‑150 (MQ=255)
                                                                                        gTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGgggttcgagagaaac                                                                                                                       <  1:1054613‑M2/81‑16 (MQ=255)
                                                                                        gTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCTGGCCTAAGTGGGCCGgggttcgagagaaac                                                                                                                       >  2:1054613‑M2/1‑66 (MQ=255)
                                                                                        gTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAg                                                  >  2:185503/1‑150 (MQ=255)
                                                                                               ggCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAg                                           >  2:521976/1‑150 (MQ=255)
                                                                                               ggCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAg                                           >  1:1433926/1‑150 (MQ=255)
                                                                                                    aaTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcat                                                                                                                            >  2:963404/1‑64 (MQ=255)
                                                                                                    aaTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTtcat                                                                                                                            <  1:963404/64‑1 (MQ=255)
                                                                                                    aaTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCa                                                   <  2:2232114/137‑1 (MQ=255)
                                                                                                    aaTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCa                                                   >  1:2232114/1‑137 (MQ=255)
                                                                                                    aaTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAc                                      >  1:782280/1‑150 (MQ=255)
                                                                                                     aTACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAcc                                     <  1:338537/150‑1 (MQ=255)
                                                                                                      tACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGtt                                                                                                           >  2:2281940/1‑79 (MQ=255)
                                                                                                      tACAAAAAACGTATCTGAAACGTTTCCCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGtt                                                                                                           <  1:2281940/79‑1 (MQ=255)
                                                                                                         aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGa                                                                   >  1:1742955/1‑116 (MQ=255)
                                                                                                         aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGa                                                                   <  2:1742955/116‑1 (MQ=255)
                                                                                                         aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCa                                                   >  1:2274017/1‑132 (MQ=255)
                                                                                                         aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCa                                                   <  2:2274017/132‑1 (MQ=255)
                                                                                                         aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAc                                      >  2:669094/1‑145 (MQ=255)
                                                                                                         aaaaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCAc                                      <  1:669094/145‑1 (MQ=255)
                                                                                                           aaaaCGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACg                               <  2:1381393/150‑1 (MQ=255)
                                                                                                                  aTCTGAAACGTTTCTCTCGAACCCtggcctaagtgggccggggttcgag                                                                                                                             <  1:1855501‑M1/49‑26 (MQ=255)
                                                                                                                  aTCTGAAACGTTTCTCTCGAACCCtggcctaagtgggccggggttcgag                                                                                                                             >  2:1855501‑M1/1‑24 (MQ=255)
                                                                                                                     tGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCgg                     >  2:1709281/1‑150 (MQ=255)
                                                                                                                     tGAAACGTTTCGCTCGAACCCCGGCCCACTGACGCCAGGGATTTCATCGTTTGGGCTATGCGTTAGCAGCCAGTTATTCCAGCGCGCACTGCAGCGCCCCGCGATAACCGCTGGCGCACAGACCGCAGAGCACCCCTACGGCAACATCgg                     >  2:124852/1‑150 (MQ=255)
                                                                                                                      gAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGa                    >  2:714334/1‑150 (MQ=255)
                                                                                                                           gTTTCTCTCGAACCCcggcccacttaggccagggttcgagagaaacgtttcagatacgttttttgtatttcgccccctgac                                                                                    >  2:1054613‑M1/1‑15 (MQ=255)
                                                                                                                           gTTTCTCTCGAACCCcggcccacttaggccagggttcgagagaaacgtttcagatacgttttttgtatttcgccccctgac                                                                                    <  1:1054613‑M1/81‑67 (MQ=255)
                                                                                                                             ttCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAg             <  1:714334/150‑1 (MQ=255)
                                                                                                                             ttCCCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAg             <  1:1550015/150‑1 (MQ=255)
                                                                                                                               ctctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGa           <  2:927033/150‑1 (MQ=255)
                                                                                                                                tctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCt                                                           <  1:79299/101‑1 (MQ=255)
                                                                                                                                tctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCt                                                           >  2:79299/1‑101 (MQ=255)
                                                                                                                                tctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAg          >  1:85343/1‑150 (MQ=255)
                                                                                                                                 ctcGAACCCCGGCCCACTTAGGCCAgggttcgagagaaacgtttcagat                                                                                                              <  1:1855501‑M2/49‑25 (MQ=255)
                                                                                                                                 ctcGAACCCCGGCCCACTTAGGCCAgggttcgagagaaacgtttcagat                                                                                                              >  2:1855501‑M2/1‑25 (MQ=255)
                                                                                                                                 ctcGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgt         >  2:1858866/1‑150 (MQ=255)
                                                                                                                                   cGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAgtgg       <  2:218783/150‑1 (MQ=255)
                                                                                                                                       ccccGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGAc   >  1:917317/1‑150 (MQ=255)
                                                                                                                                        cctggcctaagtgggccggggttcgagagaaacgtttcagatacgttttttgtatttcgccccctgaccgaacctttgggagttgatgattaatggatatccgtaaagtcaagaaactgatcgagctgctggaagagtctggcatcgacg  >  1:1018254‑M1/1‑2 (MQ=255)
                                                                                                                                        cctggcctaagtgggccggggttcgagagaaacgtttcagatacgttttttgtatttcgccccctgaccgaacctttgggagttgatgattaatggatatccgtaaagtcaagaaactgatcgagctgctggaagagtctggcatcgacg  >  1:2234042‑M1/1‑2 (MQ=255)
                                                                                                                                        cctggcctaagtgggccggggttcgagagaaacgtttcagatacgttttttgtatttcgccccctgaccgaacctttgggagttgatgattaatggatatccgtaaagtcaagaaactga                                >  2:294494‑M1/1‑2 (MQ=255)
                                                                                                                                        cctggcctaagtgggccggggttcgagagaaacgtttcagatacgttttttgtatttcgccccctgaccgaacctttgggagttgatgattaatggatatccgtaaagtcaagaaactga                                <  1:294494‑M1/120‑119 (MQ=255)
                                                                                                                                         |                                                                                                                                                    
CCAGTTCGTCGATGCCAGACTCTTCCAGCAGCTCGATCAGTTTCTTGACTTTACGGATATCCATTAATCATCAACTCCCAAAGGTTCGGTCAGGGGGCGAAATACAAAAAACGTATCTGAAACGTTTCTCTCGAACCCCGGCCCACTTAGGCCAGGGTTTTCATCATTTGGGCTGTGCGTTGGCAGCCAGTTGTTCCAGCGCGGACTCCAGGGCCAGGCGATAACCGCTGGCGCCCAGACCGCAGATCACCCCTACGGCAACATCGGAAAAGTAGGAGTGGTGACG  >  NC_002947/650096‑650381

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.