New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2664074	48 (0.540)	3 (0.040)	3/200	NT	7.5%	intergenic (+56/‑107)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase
	?	NC_002947	= 2664107	35 (0.490)					intergenic (+89/‑74)	prpC/acnA‑II	methylcitrate synthase/aconitate hydratase

GAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTG  >  NC_002947/2663929‑2664222                                                                                                                                                  |                                                                                                                                                     gAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCAccc                                                                                                                                                  <  2:1404182/150‑1 (MQ=255)     ggcgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGcc                                                                                                                                              >  2:1603637/2‑150 (MQ=255)       cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCtt                                                                                                                                            <  1:343900/150‑1 (MQ=255)          gcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTa                                                                                                                                         >  1:2162606/1‑150 (MQ=255)          gcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTa                                                                                                                                         <  1:1497258/150‑1 (MQ=255)           ccAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTaa                                                                                                                                        <  1:1596553/150‑1 (MQ=255)            caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAAc                                                                                                                                       <  1:2163405/150‑1 (MQ=255)            caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAAc                                                                                                                                       >  1:1912853/1‑150 (MQ=255)            caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGAGTGCCCGCGAATGCACCCGGCCTTGTAAc                                                                                                                                       >  1:1755434/1‑150 (MQ=255)              acatcCGCATCATCCGCCCCAGCGCCGAGTATGTCGGCGTCAAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTCTAACCa                                                                                                                                     <  1:498230/150‑1 (MQ=255)                   cGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgtg                                                                                                                                >  2:2040151/1‑150 (MQ=255)                   cGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgtg                                                                                                                                >  1:1122521/1‑150 (MQ=255)                      acaatcCGCCCGAGCGCCGAGTATGTCGGAGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCTCTGTGCAc                                                                                                                             <  2:458994/147‑1 (MQ=255)                        catcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACct                                                                                                                           <  2:1427311/150‑1 (MQ=255)                           ccGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgct                                                                                                                        <  1:913999/150‑1 (MQ=255)                            cGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACctgctg                                                                                                                       <  1:2092472/150‑1 (MQ=255)                             gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                                      >  1:998302/1‑150 (MQ=255)                             gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                                      >  1:2324548/1‑150 (MQ=255)                             gCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGa                                                                                                                      <  2:1755434/150‑1 (MQ=255)                              cccGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCACCCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc                                                                                                                     <  1:1603637/150‑1 (MQ=255)                              cccGAGCGCCGAGTATGTCGGCGTCGAACAGCAAGTAAACGTGTCTATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc                                                                                                                     <  2:1939159/150‑1 (MQ=255)                                    tcggtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgaGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTc                                                                                                               <  2:2121830‑M1/63‑1 (MQ=255)                                      ccGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgc                                                                                                             <  2:2154584‑M1/150‑42 (MQ=255)                                       gtgcctggcaggtgcttgcggtatgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgaGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg                                                                                                            >  1:2121830‑M1/85‑150 (MQ=255)                                       cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcg                                                                                                            <  2:761727‑M2/150‑10 (MQ=255)                                        gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgg                                                                                                           >  1:761727‑M2/1‑140 (MQ=255)                                        gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgg                                                                                                           >  1:2040151‑M2/1‑140 (MQ=255)                                         aGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcatttgcggg                                                                                                          <  2:1893063‑M2/150‑12 (MQ=255)                                               tCGGCGTCGAACAGCGCCAGTTCGTGCAGATCGAGGAGCGCTGAATAGCTATAGAGAGGCAACCGGTTTCCCTTGAGGGAGCGGCCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgggcacgcc                                                                                                    <  2:469023‑M2/150‑18 (MQ=255)                                                  gCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgggcacgcccgc                                                                                                 >  2:2324548‑M2/1‑130 (MQ=255)                                                    gTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt                                                                                                                                 >  2:1164221/1‑116 (MQ=255)                                                    gTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACtgt                                                                                                                                 <  1:1164221/116‑1 (MQ=255)                                                             cgcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTa                                                                                      <  1:944641/150‑1 (MQ=255)                                                             atgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg                                                                                                            >  2:1267841‑M1/63‑128 (MQ=255)                                                             atgcagtgttcatcatggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg                                                                                                            <  1:1267841‑M1/66‑1 (MQ=255)                                                               ccAGTTCGTGCCGATCGAGCAGCGCTTAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACg                                                                                    <  1:2069869/150‑1 (MQ=255)                                                                     cGTGCCGATCGAGCAGCGATGAATAGGTATAGAGAGGCAACTCGTTTGCCTTGAGGGAGCGGGCGTGCCCGCCAATGCCCCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCAGCTCCCACAGGTACGGTGaaa                                                                              <  2:139768/150‑1 (MQ=255)                                                                       tGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaa                                                                                         >  2:1125907‑M1/1‑76 (MQ=255)                                                                       tGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaa                                                                                         <  1:1125907‑M1/137‑62 (MQ=255)                                                                       tGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAAcc                                                                            >  1:1400546/1‑150 (MQ=255)                                                                        gCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc                                                                                                                     <  2:141047/108‑1 (MQ=255)                                                                        gCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGAc                                                                                                                     >  1:141047/1‑108 (MQ=255)                                                                         ccGATCGAGCAGGGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCTCTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCtt                                                                          <  2:830851/150‑1 (MQ=255)                                                                          cGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCca                                                                                            <  2:1569041/131‑1 (MQ=255)                                                                          cGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCca                                                                                            >  1:1569041/1‑131 (MQ=255)                                                                           atggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                                           >  2:1698421‑M1/49‑115 (MQ=255)                                                                           atggaatcaggctcggtcacaggattcggaaggtttcaccgtacctgtGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg                                                                                                           <  1:1698421‑M1/67‑1 (MQ=255)                                                                            aTCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCg                                                                       >  2:118462/1‑150 (MQ=255)                                                                              cGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGaa                                                                     <  1:1528002/150‑1 (MQ=255)                                                                               gAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAAt                                                                    <  2:998302/150‑1 (MQ=255)                                                                                 gcagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATcc                                                                  >  2:2210294/1‑150 (MQ=255)                                                                                 gcagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATcc                                                                  >  1:808801/1‑150 (MQ=255)                                                                                  cagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                  >  1:431864/1‑133 (MQ=255)                                                                                  cagcGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                  <  2:431864/133‑1 (MQ=255)                                                                                        tGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGAcc                                                           >  1:1350964/1‑150 (MQ=255)                                                                                              gCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcg                                                                                                            <  2:827722‑M2/95‑10 (MQ=255)                                                                                              gCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcg                                                                                                            >  1:827722‑M2/1‑86 (MQ=255)                                                                                               cTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAAc                                                                             >  2:1178528/1‑125 (MQ=255)                                                                                               cTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAAc                                                                             <  1:1178528/125‑1 (MQ=255)                                                                                                       agGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                  <  2:1448695/112‑1 (MQ=255)                                                                                                       agGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGt                                                                                  >  1:1448695/1‑112 (MQ=255)                                                                                                        ggCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga                                           <  2:1122521/150‑1 (MQ=255)                                                                                                           aaCCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACTCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCAtgatga                                        >  2:1571544/1‑150 (MQ=255)                                                                                                              ccGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAaca                                     >  1:1510840/1‑150 (MQ=255)                                                                                                              ccGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAaca                                     >  2:2084653/1‑150 (MQ=255)                                                                                                                  ttCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGc                                 <  2:1350964/150‑1 (MQ=255)                                                                                                                       ttGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggca                                         <  1:1125907‑M2/137‑77 (MQ=255)                                                                                                                       ttGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggca                                         >  2:1125907‑M2/1‑61 (MQ=255)                                                                                                                               gCGGGCGTGCCCGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggcacgaactggcgctgttcgacgc                    >  2:2324548‑M1/1‑20 (MQ=255)                                                                                                                                 GGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCt                  >  2:1330542‑M1/1‑150 (MQ=255)                                                                                                                                 GGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCt                  >  2:2162606‑M1/1‑150 (MQ=255)                                                                                                                                  ggCGTGCCCGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacggccgctccctcaagggaaaccggttgcctctctatagctattcagcgctcctcgatctgcacgaactggcgctgttcgacgccga                 <  2:469023‑M1/150‑134 (MQ=255)                                                                                                                                  GGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg                 <  1:1662943‑M1/150‑1 (MQ=255)                                                                                                                                     GTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCa              >  2:808801‑M1/1‑150 (MQ=255)                                                                                                                                        cccGCAAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggcacgaactggcgctgttcgacgccgacatact           <  2:1893063‑M1/150‑140 (MQ=255)                                                                                                                                        CCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGc           <  1:1478545‑M1/150‑1 (MQ=255)                                                                                                                                         ccGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggcacgaactggcgctgttcgacgccgacatactc          >  1:2040151‑M1/1‑10 (MQ=255)                                                                                                                                         ccGCGAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggcacgaactggcgctgttcgacgccgacatactc          >  1:761727‑M1/1‑10 (MQ=255)                                                                                                                                         CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGAtt                                                 >  2:669667‑M1/1‑111 (MQ=255)                                                                                                                                         CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGAtt                                                 <  1:669667‑M1/111‑1 (MQ=255)                                                                                                                                         CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCa          <  1:1958517‑M1/150‑1 (MQ=255)                                                                                                                                         CCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTCACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCa          <  1:408172‑M1/150‑1 (MQ=255)                                                                                                                                          cgcgAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggcacgaactggcgctgttcgacgccgacatactcg         <  2:761727‑M1/150‑142 (MQ=255)                                                                                                                                          cgcgAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagc                                                                >  1:827722‑M1/1‑9 (MQ=255)                                                                                                                                          cgcgAATGCgtcagcaggtgcacagtggttacaaggccgggtgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagc                                                                <  2:827722‑M1/95‑87 (MQ=255)                                                                                                                                          CGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGc                                                                                                     >  1:1851187‑M1/1‑58 (MQ=255)                                                                                                                                          CGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGc                                                                                                     <  2:1851187‑M1/58‑1 (MQ=255)                                                                                                                                           gcgAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACgcattcgcgggcacgcccgctccctcaagggaaacgggttgcctctctatagctattcagcgctgctcgatcggcacgaactggcgctgttcgacgccgacatactcgg        <  2:2154584‑M2/150‑110 (MQ=255)                                                                                                                                           GCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACg                                                                                                                    >  2:1599342‑M1/1‑42 (MQ=255)                                                                                                                                           GCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACg                                                                                                                    <  1:1599342‑M1/42‑1 (MQ=255)                                                                                                                                           GCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa                                <  1:585924‑M1/126‑1 (MQ=255)                                                                                                                                           GCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCa                                >  2:585924‑M1/1‑126 (MQ=255)                                                                                                                                           GCGAATGCACCCGGCCTTGTAACCACTGTGAACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGAACGAGCCTGATTCCatg                                            <  2:1156400‑M1/114‑1 (MQ=255)                                                                                                                                           GCGAATGCACCCGGCCTTGTAACCACTGTGAACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGAACGAGCCTGATTCCatg                                            >  1:1156400‑M1/1‑114 (MQ=255)                                                                                                                                                TGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTTGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGTACACTGCATACCGCAAGCACCTGCCAGGCACCGACCt   >  1:1893063‑M1/1‑150 (MQ=255)                                                                                                                                                 GCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCa              <  2:871184‑M1/138‑1 (MQ=255)                                                                                                                                                 GCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTg  >  2:1958517‑M1/1‑150 (MQ=255)                                                                                                                                                 GCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAAGCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCa              >  1:871184‑M1/1‑138 (MQ=255)                                                                                                                                                  |                                                                                                                                                     GAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCGTTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATGCACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTGCCAGGCACCGACCTG  >  NC_002947/2663929‑2664222

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.