New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3947957 =64 (0.730)6 (0.090) 5/192 NT 13.6% coding (136/1797 nt) PP_3483 type II secretion system protein
?NC_002947 3948042 = 27 (0.400)coding (51/1797 nt) PP_3483 type II secretion system protein

Only 100 of 102 total aligned reads displayed.

GTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCG  >  NC_002947/3947808‑3948106
                                                                                                                                                     |                                                                                                                                                     
gggaggCAGGGGCAGGCCCGGGGGGCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTGCCAGGGAGTCGAGCAGGCGGTGGTTAGTGGCGTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGtt                                                                                                                                                       <  2:532002/145‑1 (MQ=255)
gTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGGCGCGGGGGTAGGCGGAAATTTTTGCTGGGtt                                                                                                                                                       >  2:1638672/1‑150 (MQ=255)
   ggcccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCtt                                                                                                                                                    <  1:394983‑M1/4‑1 (MQ=255)
      ccgacgacgatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctacaaagcctgcaccgacgTCTTcgc                                                                                                                                                 <  1:177349‑M1/7‑1 (MQ=255)
       atggTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTcgcg                                                                                                                                                <  1:1272452/148‑1 (MQ=255)
       aGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGttcttc                                                                                                                                                   <  2:2059336/147‑1 (MQ=255)
       aGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGttcttc                                                                                                                                                   >  1:2059336/1‑147 (MQ=255)
        gggTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCgg                                                                                                                                               <  1:106853/150‑1 (MQ=255)
        gggTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGGCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCgg                                                                                                                                               <  1:1638672/150‑1 (MQ=255)
            cAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCAt                                                                                                                                           <  1:1234713/150‑1 (MQ=255)
              gatcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGc                                                                                                                                         >  1:2169785‑M1/136‑150 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGccc                                                                                                                                       >  1:732207‑M1/134‑150 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGccc                                                                                                                                       <  2:2330906‑M1/17‑1 (MQ=255)
                tcaactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggaatagcaggccataggagaagcatgcgattcaacgcgtgaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGccc                                                                                                                                       <  2:1431489‑M1/17‑1 (MQ=255)
                 ccAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCg                                                                                                                                      >  2:347442/1‑150 (MQ=255)
                 caactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCg                                                                                                                                      <  1:837588‑M1/18‑1 (MQ=255)
                  aactgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGc                                                                                                                                     <  2:2208749‑M1/19‑1 (MQ=255)
                    ctgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTc                                                                                                                                   >  1:2208749‑M1/130‑150 (MQ=255)
                    ctgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCACGCTc                                                                                                                                   <  1:1998252‑M1/21‑1 (MQ=255)
                     tgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGcc                                                                                                                                        <  1:638732‑M1/16‑1 (MQ=255)
                     tgctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGcc                                                                                                                                        >  2:638732‑M1/129‑144 (MQ=255)
                     gcgcCGGGGGGAGGTGTCGGGGGGGTCGCAGGCCAGGCGTTCCAGGCAGTCTAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTcc                                                                                                                                  <  2:189735/150‑1 (MQ=255)
                       ctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                <  2:356977‑M1/24‑1 (MQ=255)
                       ctcacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                <  1:1367338‑M1/24‑1 (MQ=255)
                         ggggTGAAGGGGGCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                              <  2:685124/149‑1 (MQ=255)
                         cacaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggactctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                              >  1:1704702‑M1/125‑150 (MQ=255)
                         cGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCcaca                                                                                                                              >  1:595213/1‑150 (MQ=255)
                          gggTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             <  2:338847/150‑1 (MQ=255)
                          gggTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             <  2:1401889/150‑1 (MQ=255)
                          acaggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             <  1:1412867‑M1/27‑1 (MQ=255)
                            aggggaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGt                                                                                                                           <  1:2238726‑M1/29‑1 (MQ=255)
                              gAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTAc                                                                                                                         <  2:1363781/150‑1 (MQ=255)
                                gaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTcgc                                                                                                                                                 <  1:2206213‑M1/7‑1 (MQ=255)
                                gaatagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTcgc                                                                                                                                                 >  2:2206213‑M1/118‑124 (MQ=255)
                                 ggTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                <  1:1520304/140‑1 (MQ=255)
                                 ggTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                >  2:1520304/1‑140 (MQ=255)
                                  gtgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATca                                                                                                                     <  1:687498/150‑1 (MQ=255)
                                   tgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGGATGCCCTCTTCCACAGGTACATcac                                                                                                                    <  2:2259479/150‑1 (MQ=255)
                                   tagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatggaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             <  2:2009742‑M1/27‑1 (MQ=255)
                                   tagcggcgcccgcacccctggccgagccagcctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatggaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             >  1:2009742‑M1/115‑141 (MQ=255)
                                        ggggTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTc                                                                                                               >  2:11897/1‑150 (MQ=255)
                                           gtgtCGCAGGCCAGGCGTCCACGGAAGTGGCGCAGGCCATAGTCCGTGGCTTGCCGACGGGCCTGCGCCAGGAGGAAGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgt                                                                                                            <  2:1653605/150‑1 (MQ=37)
                                             ggtgCAGACCAGGCGTTCCGGGCAGGCGAGCAGGCGCTCGTCAGTTGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTgg                                                                                                          <  2:251136/147‑1 (MQ=39)
                                                      caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGTGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTcg                                                                                                                                                  >  2:465049/1‑101 (MQ=255)
                                                      caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGTGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTcg                                                                                                                                                  <  1:465049/101‑1 (MQ=255)
                                                      caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAc                                                                                                 >  2:837588/1‑150 (MQ=255)
                                                       aggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGCTCTGTGGGCTGCATACa                                                                                                >  2:1367338/1‑150 (MQ=255)
                                                        ggcGTTCCAGGCAGTCGAGCAGGCGCTCGGCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACAt                                                                                               <  2:595213/150‑1 (MQ=255)
                                                         gcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACTTc                                                                                              <  1:2330533/150‑1 (MQ=255)
                                                         gcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                              >  2:2234904/1‑150 (MQ=255)
                                                           gTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             >  1:1985171/1‑117 (MQ=255)
                                                           gTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAg                                                                                                                             <  2:1985171/117‑1 (MQ=255)
                                                            ttCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTGTGTGGGCTGGATACATGCtg                                                                                           >  1:335228/1‑150 (MQ=255)
                                                             tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCtgt                                                                                          <  2:934282/150‑1 (MQ=255)
                                                             tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCtgt                                                                                          <  1:11897/150‑1 (MQ=255)
                                                              ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCtgtg                                                                                         <  1:1370025/150‑1 (MQ=255)
                                                               cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGTCGTCGCGGGGGTAGGCGGACCTATTTGTTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        <  1:1686971/150‑1 (MQ=255)
                                                               cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCTGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTgg                                                                                        <  1:2063758/150‑1 (MQ=255)
                                                                 cctgcgccgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                      >  2:2238726‑M1/85‑150 (MQ=255)
                                                                 cctgcgacgcgcccctgagcggagtcgcaggccatgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGa                                                                                      >  1:1431489‑M1/85‑150 (MQ=255)
                                                                   cAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCTACTAATGTCGCGTTCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGc                                                                                    <  2:1153058/150‑1 (MQ=255)
                                                                     gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  <  2:1919533/150‑1 (MQ=255)
                                                                            aGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGcc                                                                           <  1:2234904/150‑1 (MQ=255)
                                                                                gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCgg                                                                                                                                               <  1:674983/78‑1 (MQ=255)
                                                                                gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCgg                                                                                                                                               >  2:674983/1‑78 (MQ=255)
                                                                                     tCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGACATGCCCGCTCAAACAGGTACATCACAGGTCTGTGGACAGCATACATGATGTGAACGCGGGCATGCCCCCGAAAAc                                                                  >  1:1863973/1‑150 (MQ=255)
                                                                                           gCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGCAGCCGTCGGt                                                            >  2:1078853/1‑150 (MQ=255)
                                                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGCAATTTTTGCTGGGTTCTTCGCGGCAATGCCGGCTCTCACAGGTACATCACAGGTCTCTGGGCTGCATACATGCTGTGGGGGCGGGAATCCCAGGGACGGCGTAGGTgt                                                          >  1:1957111/1‑149 (MQ=255)
                                                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACAt                                                                                               <  2:1639372/113‑1 (MQ=255)
                                                                                             ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACAt                                                                                               >  1:1639372/1‑113 (MQ=255)
                                                                                                 catgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                >  2:1859764‑M1/53‑76 (MQ=255)
                                                                                                 catgccagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCca                                                                                                                                <  1:1859764‑M1/24‑1 (MQ=255)
                                                                                                 aGACGGGCCTGGGCCAGGAGGTCGCGGTGGTAGGCGTAAATTTTTTCTGGGTTCTGCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCGGTGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGc                                                      <  2:1863973/150‑1 (MQ=255)
                                                                                                   gcGGGGCTGCGCCAGGAGGTCGCGGGGGTAGGTGGAAATGGTTGAGGGGTGCTGCGGGGGCATGCCCGCGCCCACAGGTACATCACAGGTCGGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCtt                                                    <  1:2086025/149‑1 (MQ=255)
                                                                                                   aCGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAt                                                                                                                       >  1:2250826/1‑83 (MQ=255)
                                                                                                   aCGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAt                                                                                                                       <  2:2250826/83‑1 (MQ=255)
                                                                                                      gggcTGGGCCAGTCGGGCGCGGGGGTAGGCGGAAATTTTGGCTGGGTTCTGCGCGGGCAGGCCCGCTTCCACGGGTTCATCGCTGGCCTGTGGGATCGATTCATCCTTGGGGAGCGGGCATGCCCGCCAAGACGTCGGTGCAGGCTTTGc                                                 <  2:333601/147‑1 (MQ=255)
                                                                                                      cagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCa                                                                                                                                            >  1:205683‑M1/48‑59 (MQ=255)
                                                                                                      cagaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCa                                                                                                                                            <  2:205683‑M1/12‑1 (MQ=255)
                                                                                                       gCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCGACAGGTACATCACAGGTCTGTGGGCTGCATAGATCCTGTGGGAGCGGGCATGCCCGCGAAGAAGGCGGTTGAGGCGTTGCa                                                >  1:356977/1‑150 (MQ=38)
                                                                                                       gCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcc                                                                                             <  2:301773/105‑1 (MQ=255)
                                                                                                       gCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcc                                                                                             >  1:301773/1‑105 (MQ=255)
                                                                                                        gaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                              <  2:2214410‑M1/58‑1 (MQ=255)
                                                                                                        gaagcattcgatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                              >  1:2214410‑M1/46‑103 (MQ=255)
                                                                                                        ccTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  <  2:1181713/115‑1 (MQ=255)
                                                                                                        ccTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  >  1:1181713/1‑115 (MQ=255)
                                                                                                          tGGGCCAGGAGGTCGCGGGGGTAGGCGGAGATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGATGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGAt                                             <  1:570251/150‑1 (MQ=255)
                                                                                                               cAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTggg                                                                                       <  2:918937/103‑1 (MQ=255)
                                                                                                               cAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTggg                                                                                       >  1:918937/1‑103 (MQ=255)
                                                                                                                aggaggTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCggg                                       <  2:826550/150‑1 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                              >  1:1564167‑M1/37‑62 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCcaca                                                                                                                              <  2:1564167‑M1/26‑1 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  >  2:2183793‑M1/37‑106 (MQ=255)
                                                                                                                 gatgcaaccccggaatctgcaaagcctgcaccgacgTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCgg                                                                                  <  1:2183793‑M1/70‑1 (MQ=255)
                                                                                                                                  gCGGAAATTTTTGCTGGGTTCTTCGCGGGCAGGCCCGCTCGCACAGGTACATCACAGGTCGGTGGGCTGCATACCTCCTTTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCt                     <  1:548736/150‑1 (MQ=255)
                                                                                                                                    ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTc                                           <  2:1861509/126‑1 (MQ=255)
                                                                                                                                    ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTc                                           >  1:1861509/1‑126 (MQ=255)
                                                                                                                                        aTTTTTGCTGGGTTCTGCGCGGGCATGCCCGTGCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATg               <  1:1078853/150‑1 (MQ=255)
                                                                                                                                               cTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCg        >  1:1258304/1‑150 (MQ=255)
                                                                                                                                                     TCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCg  >  2:2297806‑M1/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
GTAATGCAGGGTCAGGCCCAGGCGCCGGGTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCG  >  NC_002947/3947808‑3948106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.