Predicted mutation
evidence seq id position mutation freq annotation gene description
JC NC_002947 6,098,315 Δ9 bp 100% coding (822‑830/867 nt) PP_5350 ← RpiR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 6098324 =2 (0.020)96 (1.190) 69/226 NT 98.0% coding (821/867 nt) PP_5350 RpiR family transcriptional regulator
?NC_002947 = 6098314 2 (0.020)coding (831/867 nt) PP_5350 RpiR family transcriptional regulator

Only 100 of 114 total aligned reads displayed.

TCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACG  >  NC_002947/6098176‑6098467
                                                                                                                                                    |                                                                                                                                               
ccggcctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCg                                                                                                                                                <  2:457461‑M1/2‑1 (MQ=255)
 cggcctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGc                                                                                                                                               <  2:809871‑M1/3‑1 (MQ=255)
    cctcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAg                                                                                                                                            >  2:1138092‑M1/145‑150 (MQ=255)
      tcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCt                                                                                                                                          <  1:1060412‑M1/8‑1 (MQ=255)
      tcttcgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCt                                                                                                                                          <  2:330192‑M1/8‑1 (MQ=255)
          cgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGt                                                                                                                                      >  1:809871‑M1/139‑150 (MQ=255)
          cgcgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGt                                                                                                                                      >  1:1505889‑M1/139‑150 (MQ=255)
          cgcgggcttgccccgttcacacagaaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGt                                                                                                                                      >  1:330192‑M1/139‑150 (MQ=255)
            cgggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGttt                                                                                                                                    <  1:2042342‑M1/14‑1 (MQ=255)
             gggcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTc                                                                                                                                   >  2:2294886‑M1/136‑150 (MQ=255)
              ggcttgccccgttcaaacaggaattgcaccgatttatagaagggcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcaacagaCGCAAGCTGCGTTTCa                                                                                                                                  >  1:843559‑M1/135‑150 (MQ=255)
               gcttgccccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttcatcgacttgggcgacagaCGCAAGCTGCGTTTCAc                                                                                                                                 <  1:1182610‑M1/17‑1 (MQ=255)
                     cccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGctc                                                                                                                             >  1:1689212‑M1/128‑148 (MQ=255)
                     cccgttcacacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGctc                                                                                                                             <  2:1689212‑M1/21‑1 (MQ=255)
                          tcacacaggaattgcaccgattgatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggt                                                                                                                      >  2:483380‑M1/123‑150 (MQ=255)
                            acacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggtttaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggtgg                                                                                                                    >  1:282873‑M1/121‑150 (MQ=255)
                            acacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCa                                                                                                                                  <  1:310731‑M1/16‑1 (MQ=255)
                            acacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCa                                                                                                                                  >  2:310731‑M1/121‑136 (MQ=255)
                            acacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggtgg                                                                                                                    >  1:2134210‑M1/121‑150 (MQ=255)
                             cacaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgcattccgtcgtaggtaggttaactggacctagacaacagaCGCAAGCTGCGTTTCACGCTCTTCAggtggt                                                                                                                   >  1:1798258‑M1/120‑150 (MQ=255)
                              acaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgactttggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                  <  1:2273838‑M1/32‑1 (MQ=255)
                              acaggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                  <  1:2267750‑M1/32‑1 (MQ=255)
                                aggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGa                                                                                                                >  2:2042342‑M1/117‑150 (MQ=255)
                                aggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGa                                                                                                                <  2:1995311‑M1/34‑1 (MQ=255)
                                 ggaattgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCGCCGTTTCACGCTCTTCAGGTGGTTGAc                                                                                                               >  1:654173‑M1/116‑150 (MQ=255)
                                  gaattgcaccgatttatagaagtgcacagtacctgtgggcgcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGAcc                                                                                                              >  1:156729‑M1/115‑150 (MQ=255)
                                     ttgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAgg                                                                                                           <  2:1237369‑M1/39‑1 (MQ=255)
                                     ttgcaccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAgg                                                                                                           <  2:637790‑M1/39‑1 (MQ=255)
                                      ttATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGc                                                                                                          >  2:77743/1‑150 (MQ=255)
                                         accgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAg                                                                                                       <  2:1513988‑M1/43‑1 (MQ=255)
                                         accgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACAAGGCTAg                                                                                                       >  2:809989‑M1/108‑150 (MQ=255)
                                         accgatttatagaagtgcaaagtacctgtggaagggggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAg                                                                                                       >  1:804963‑M1/108‑150 (MQ=255)
                                          ccgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAgg                                                                                                      >  1:1513988‑M1/107‑150 (MQ=255)
                                           cgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggt                                                                                                                      <  1:881894‑M1/28‑1 (MQ=255)
                                           cgatttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAggt                                                                                                                      >  2:881894‑M1/106‑133 (MQ=255)
                                             atttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGccc                                                                                                   >  2:2267750‑M1/104‑150 (MQ=255)
                                             atttatagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGccc                                                                                                   >  2:1260947‑M1/104‑150 (MQ=255)
                                                 atagaagtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCcgcgc                                                                                               <  2:509779‑M1/51‑1 (MQ=255)
                                                       gtgcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATg                                                                                         <  1:314577‑M1/57‑1 (MQ=255)
                                                         gcacagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGc                                                                                       <  2:779106‑M1/59‑1 (MQ=255)
                                                           acagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcggcttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCaa                                                                                     >  2:544909‑M1/90‑150 (MQ=255)
                                                            cagtacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAAc                                                                                    >  1:509779‑M1/89‑150 (MQ=255)
                                                               tacctgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGcc                                                                                 >  1:1078283‑M1/86‑150 (MQ=255)
                                                                   tgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGc                                                                                                                                        >  1:1346626‑M1/82‑91 (MQ=255)
                                                                   tgtgggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGc                                                                                                                                        <  2:1346626‑M1/10‑1 (MQ=255)
                                                                       ggagcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGcc                                                                          >  1:636537‑M1/78‑149 (MQ=255)
                                                                          gcgggcaagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCa                                                                      >  1:457461‑M1/75‑150 (MQ=255)
                                                                               caagcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCg                                                                 >  2:1126019‑M1/70‑150 (MQ=255)
                                                                                 agcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGAt                                                               >  2:152004‑M1/68‑150 (MQ=255)
                                                                                 agcccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGAt                                                               >  2:1565564‑M1/68‑150 (MQ=255)
                                                                                   cccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATca                                                             >  2:314577‑M1/66‑150 (MQ=255)
                                                                                   cccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATca                                                             >  2:1217285‑M1/66‑150 (MQ=255)
                                                                                   cccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATca                                                             >  1:1025357‑M1/66‑150 (MQ=255)
                                                                                    ccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGc                                                                                                          >  2:830044‑M1/65‑104 (MQ=255)
                                                                                    ccgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGc                                                                                                          <  1:830044‑M1/40‑1 (MQ=255)
                                                                                     cgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgctcgacttgggagacagaAGCAAGCTGCTTTTCAGGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATcacc                                                           <  2:2017207‑M1/87‑1 (MQ=255)
                                                                                     cgcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATcacc                                                           >  2:1060412‑M1/64‑150 (MQ=255)
                                                                                      gcgaacaggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATcacca                                                          >  2:1649371‑M1/63‑150 (MQ=255)
                                                                                            aggccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGACCCCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGt                                                    <  1:253325‑M1/94‑1 (MQ=255)
                                                                                              gccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATg                                                                             <  2:1167319‑M1/69‑1 (MQ=255)
                                                                                              gccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATg                                                                             >  1:1167319‑M1/55‑123 (MQ=255)
                                                                                              gccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTgg                                                  >  2:2273838‑M1/55‑150 (MQ=255)
                                                                                              gccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTgg                                                  <  1:1971167‑M1/96‑1 (MQ=255)
                                                                                               ccagtacaggttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTggg                                                 >  1:688039‑M1/54‑150 (MQ=255)
                                                                                                        gttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                  <  2:11229‑M1/32‑1 (MQ=255)
                                                                                                        gttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGtt                                                                                                                  >  1:11229‑M1/45‑76 (MQ=255)
                                                                                                         ttgaattcagtcgtcggtagccttgatngacttgggcgacngaCGCANGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAAtacgcaa                                       <  1:1426947‑M1/107‑3 (MQ=255)
                                                                                                         ttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAAc                                                                                    >  2:1979309‑M1/44‑105 (MQ=255)
                                                                                                         ttgaattcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAAc                                                                                    <  1:1979309‑M1/62‑1 (MQ=255)
                                                                                                              ttcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCa                                  <  2:443541‑M1/112‑1 (MQ=255)
                                                                                                              ttcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCa                                  <  1:1323098‑M1/112‑1 (MQ=255)
                                                                                                              ttcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCa                                  <  1:2190614‑M1/112‑1 (MQ=255)
                                                                                                               tcagtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAg                                 <  2:2311275‑M1/113‑1 (MQ=255)
                                                                                                                gTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCAAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGt                                >  2:309587/1‑150 (MQ=255)
                                                                                                                  gtcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTgg                              <  2:1567192‑M1/116‑1 (MQ=255)
                                                                                                                   tcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTggg                             >  1:1995311‑M1/34‑150 (MQ=255)
                                                                                                                   tcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTggg                             <  2:28951‑M1/117‑1 (MQ=255)
                                                                                                                   tcgtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTggg                             >  1:1405895‑M1/34‑150 (MQ=255)
                                                                                                                     gtcggtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGgt                           >  1:184119‑M1/32‑150 (MQ=255)
                                                                                                                         gtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAg                       <  1:2197415‑M1/123‑1 (MQ=255)
                                                                                                                         gtagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAg                       >  2:1971167‑M1/28‑150 (MQ=255)
                                                                                                                          tagccttgatcgacttgggcgacataCGCAAGCTGCGTTTCAAGCGCTTAAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGGAAGGGGGGTGTAGa                      <  1:115155‑M1/124‑1 (MQ=255)
                                                                                                                          tagccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGa                      <  1:312050‑M1/124‑1 (MQ=255)
                                                                                                                             ccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTa                        <  2:53486‑M1/122‑1 (MQ=255)
                                                                                                                             ccttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTa                        >  1:53486‑M1/24‑145 (MQ=255)
                                                                                                                              cttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGAtctc                  <  1:394636‑M1/128‑1 (MQ=255)
                                                                                                                               ttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCg                 >  2:2197415‑M1/22‑150 (MQ=255)
                                                                                                                               ttgatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCg                 >  1:1924027‑M1/22‑150 (MQ=255)
                                                                                                                                 gatcgacttgggcgacagcCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGgt               >  2:380033‑M1/20‑150 (MQ=255)
                                                                                                                                 gatcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGgt               >  1:910650‑M1/20‑150 (MQ=255)
                                                                                                                                  atcgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGgtg              <  1:2071606‑M1/132‑1 (MQ=255)
                                                                                                                                    cgacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTc            >  2:2071606‑M1/17‑150 (MQ=255)
                                                                                                                                     gacttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCt           >  2:394636‑M1/16‑150 (MQ=255)
                                                                                                                                       cttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTc         >  2:312050‑M1/14‑150 (MQ=255)
                                                                                                                                       cttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTc         >  1:1567192‑M1/14‑150 (MQ=255)
                                                                                                                                       cttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTc         >  1:28951‑M1/14‑150 (MQ=255)
                                                                                                                                        ttgggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCa        >  2:2190614‑M1/13‑150 (MQ=255)
                                                                                                                                           ggcgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGc     <  2:2162930‑M1/141‑1 (MQ=255)
                                                                                                                                             cgacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCAc   <  2:2100340‑M1/143‑1 (MQ=255)
                                                                                                                                              gacagaCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACg  <  2:1037403‑M1/144‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                               
TCGCGGGCTTGCCCCGTTCACACAGGAATTGCACCGATTTATAGAAGTGCACAGTACCTGTGGGAGCGGGCAAGCCCGCGAACAGGCCAGTACAGGTTGAATTCAGTCGTCGGTAGCCTTGATCGACTTGGGCGACAGACGCAAGCTGCGCAAGCTGCGTTTCACGCTCTTCAGGTGGTTGACCAGGCTAGGCCCGCGCGCCATGGCAACGCCCATGGCCAGCACGTCGATCACCACCAGGTGGGCAATACGCGAGGTCAGTGGGGTGTAGATCTCGGTGTCTTCATGCACG  >  NC_002947/6098176‑6098467

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.