New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1570468	38 (0.430)	4 (0.060)	4/196	NT	10.7%	intergenic (+34/‑154)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease
	?	NC_002947	= 1570494	37 (0.530)					intergenic (+60/‑128)	pcaF‑I/pcaT	beta‑ketoadipyl‑CoA thiolase/alpha‑ketoglutarate permease

AGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACC  >  NC_002947/1570346‑1570633                                                                                                                                                     |                                                                                                                                            aGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGg                                                                                                                                            >  2:452451‑M2/1‑149 (MQ=255)       agaagaGTGGCGGTTGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                                                                      >  2:243428‑M2/1‑143 (MQ=255)       agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                                                                      >  2:844690‑M2/1‑143 (MQ=255)       agaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                                                                      >  2:844223‑M2/1‑143 (MQ=255)        gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcggg                                                                                                                                     <  2:952672‑M2/150‑9 (MQ=255)        gaagaGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTAGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcggg                                                                                                                                     >  1:1195165‑M2/1‑142 (MQ=255)           gagTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCAGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggctt                                                                                                                                  >  2:521866‑M2/1‑139 (MQ=255)                      gCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCGTCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGCTCCACGCAATCACCTGTGggagcgggcttccccgcgaaga                                                                                                                       >  1:2224666‑M2/1‑128 (MQ=255)                      gCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaaga                                                                                                                       >  2:694132‑M2/1‑128 (MQ=255)                        gtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtgtg                                                                                                                                             >  2:701482‑M1/75‑126 (MQ=255)                        gtagttctagacatacctagtaacacactcgttccgctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCtgtg                                                                                                                                             <  1:701482‑M1/52‑1 (MQ=255)                         aGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGGCCGAATTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggc                                                                                                                    >  1:614740‑M2/1‑125 (MQ=255)                              cTGGCGACCATGTGTGTGGGTGTAGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCtctc                                                                                                               <  1:11996/150‑1 (MQ=255)                                ggCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                                                                      >  2:936770‑M2/1‑118 (MQ=255)                                ggCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgg                                                                                                                                      <  1:936770‑M2/125‑8 (MQ=255)                                 gCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtg                                                                                                            <  1:952672/150‑1 (MQ=255)                                  cGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCtgt                                                                                                           <  1:448186/150‑1 (MQ=255)                                    aCCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                                                                         <  2:718233/150‑1 (MQ=255)                                     ccATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTgag                                                                                                        >  1:926815/1‑150 (MQ=255)                                            tgtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCAACTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAg                                                                                                 >  2:1147819/1‑150 (MQ=255)                                             gtgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAgg                                                                                                <  2:1635504/150‑1 (MQ=255)                                              tgGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGc                                                                                               <  1:1664109/150‑1 (MQ=255)                                                 gtgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgc                                                                                                                            >  2:655455‑M2/1‑101 (MQ=255)                                                 gtgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgc                                                                                                                            <  1:655455‑M2/118‑18 (MQ=255)                                                  tgtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAt                                                                                           >  1:2188998/1‑150 (MQ=255)                                                   gtCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCAtt                                                                                          <  2:2188998/150‑1 (MQ=255)                                                      ggCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGTGACATAAGGCCCAtt                                                                                          <  2:53204/147‑1 (MQ=255)                                                      ggCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGTGACATAAGGCCCAtt                                                                                          >  1:53204/1‑147 (MQ=255)                                                        cagcgaacTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAg                                                                                     <  2:365631/143‑1 (MQ=255)                                                         cAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttcccc                                                                                                                              >  2:295652‑M2/1‑93 (MQ=255)                                                         cAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttcccc                                                                                                                              <  1:295652‑M2/108‑16 (MQ=255)                                                           gctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCggg                                                                                                                                     <  2:16513‑M1/60‑1 (MQ=255)                                                           gctatcgggctggcaatgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCggg                                                                                                                                     >  1:16513‑M1/40‑99 (MQ=255)                                                                     ttGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGaa                                                                        >  1:646187/1‑150 (MQ=255)                                                                        gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggag                                                                                                                                         <  2:75433‑M2/82‑5 (MQ=255)                                                                        gCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggag                                                                                                                                         >  1:75433‑M2/1‑78 (MQ=255)                                                                          cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                                                                   >  2:2254099/1‑150 (MQ=255)                                                                          cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                                                                   <  1:2254099/150‑1 (MQ=255)                                                                          cATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgt                                                                   >  1:1712109/1‑150 (MQ=255)                                                                           tgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCg                                                                                                                                       <  2:2168099‑M1/58‑1 (MQ=255)                                                                           tgggccttatgtctcacaggagaGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCg                                                                                                                                       >  1:2168099‑M1/24‑81 (MQ=255)                                                                            tCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAgtgt                                                                 <  2:1712109/150‑1 (MQ=255)                                                                             cGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccc                                                                                                                               >  1:362285‑M2/1‑73 (MQ=255)                                                                             cGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccc                                                                                                                               <  2:362285‑M2/87‑15 (MQ=255)                                                                               aGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                                                                     >  2:1832100/1‑143 (MQ=255)                                                                               aGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGa                                                                     <  1:1832100/143‑1 (MQ=255)                                                                                   ggTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTCCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTa                                                          <  1:369949/150‑1 (MQ=255)                                                                                        gACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTAt                                                     <  2:646187/150‑1 (MQ=255)                                                                                           cTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGt                                                       <  1:838214/145‑1 (MQ=255)                                                                                           cTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGt                                                       >  2:838214/1‑145 (MQ=255)                                                                                                 cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                                                                         >  2:894241/1‑89 (MQ=255)                                                                                                 cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTga                                                                                                         <  1:894241/89‑1 (MQ=255)                                                                                                 cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGc                                                                                               >  1:779682/1‑99 (MQ=255)                                                                                                 cGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGc                                                                                               <  2:779682/99‑1 (MQ=255)                                                                                                      TCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCt                                       <  2:459080‑M1/150‑1 (MQ=255)                                                                                                             GGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGAc                                  <  1:2189704‑M1/148‑1 (MQ=255)                                                                                                             GGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGAc                                  >  2:2189704‑M1/1‑148 (MQ=255)                                                                                                                  aGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactct                           <  1:1470095‑M2/150‑115 (MQ=255)                                                                                                                    CCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAAAGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa                         <  2:395943‑M1/150‑1 (MQ=255)                                                                                                                     ccGCTCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttct                        <  2:1112558‑M2/150‑118 (MQ=255)                                                                                                                     CCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAg                        <  1:1088024‑M1/150‑1 (MQ=255)                                                                                                                       GCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGaa                                             <  1:1298716‑M1/127‑1 (MQ=255)                                                                                                                       GCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGaa                                             >  2:1298716‑M1/1‑127 (MQ=255)                                                                                                                         tCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacc                                                                 >  1:1399074‑M2/1‑29 (MQ=255)                                                                                                                         tCCAACAGGGATCCACGCAATCACCTGTGggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacc                                                                 <  2:1399074‑M2/105‑77 (MQ=255)                                                                                                                           CAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCct                                                                                                                  >  2:575338‑M1/1‑54 (MQ=255)                                                                                                                           CAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCct                                                                                                                  <  1:575338‑M1/54‑1 (MQ=255)                                                                                                                             aCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa                         >  2:1353459/1‑141 (MQ=255)                                                                                                                             aCAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGa                         <  1:1353459/141‑1 (MQ=255)                                                                                                                              cAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGt               >  1:69850/1‑150 (MQ=255)                                                                                                                                    tCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGAc         >  1:93771/1‑150 (MQ=255)                                                                                                                                    tCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGAc         >  1:2274369/1‑150 (MQ=255)                                                                                                                                          cAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCAGATAGACGGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTGCAGGAGTGAACCCTGCATGACCGCAAc   >  1:1096096/1‑150 (MQ=255)                                                                                                                                           aaTCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAcc  >  1:596951/1‑150 (MQ=255)                                                                                                                                           aaTCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAAcc  <  1:459080/150‑1 (MQ=255)                                                                                                                                             tCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTa                      >  2:2333245/1‑128 (MQ=255)                                                                                                                                             tCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGACTa                      <  1:2333245/128‑1 (MQ=255)                                                                                                                                                    tgggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttctc                       <  2:1202446‑M2/120‑119 (MQ=255)                                                                                                                                                    tgggagcgggcttccccgcgaagaggccggtacaggtcaaacccgctcgatggccaacgccagaccttggccgacacccacacacatggtcgccaggcccttgcgaccgccactcttctc                       >  1:1202446‑M2/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                            AGCTGGAGAAGAGTGGCGGTCGCAAGGGCCTGGCGACCATGTGTGTGGGTGTCGGCCAAGGTCTGGCGTTGGCCATCGAGCGGGTTTGACCTGTACCGGCCTCTTCGCGGGGAAGCCCGCTCCAACAGGGATCCACGCAATCACCTGTGGGAGCGGGCTTCCCCGCGAAGAGGCCTCTCCTGTGAGACATAAGGCCCATTGCCAGCCCGATAGCGGAACGAGTGTGTTACTAGGTATGTCTAGAACTACCTAGGACCCTCCAGGAGTAAACCCGTCATGACCTCAACC  >  NC_002947/1570346‑1570633

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.