New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1622527 =80 (0.910)11 (0.150) 9/212 NT 14.5% intergenic (+7/+59) PP_1421/PP_1422 sensor histidine kinase TctE/hypothetical protein
?NC_002947 1622577 = 61 (0.810)intergenic (+57/+9) PP_1421/PP_1422 sensor histidine kinase TctE/hypothetical protein

Only 100 of 116 total aligned reads displayed.

GAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGCAC  >  NC_002947/1622431‑1622726
                                                                                                                                                   |                                                                                                                                                     
 agaTCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTa                                                                                                                                                   <  2:1764648/150‑1 (MQ=255)
    tCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAg                                                                                                                                                >  2:239609/1‑150 (MQ=255)
          gggCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGATGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAgc                                                                                                                                          <  1:1375904/150‑1 (MQ=255)
          gggCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCaac                                                                                                                                          <  1:1375958/150‑3 (MQ=255)
          gggCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGACTGTCTC‑CAGTGCGCAGGTGGCGCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAgc                                                                                                                                          >  2:1228778/1‑150 (MQ=255)
            gcgcACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTg                                                                                                                                                      >  1:2145463/1‑136 (MQ=255)
            gcgcACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTg                                                                                                                                                      <  2:2145463/136‑1 (MQ=255)
                  cTGGCGCCACGGCCCCTGCGCGATGGCGAGAAGGGCGGGTTGCGGGTGCGCGTGAGCTTTATCGCGGATTGATGGTTTGCTTGTGTCGCCCCTTTCAGG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATg                                                                                                                                  <  1:280312/150‑1 (MQ=255)
                  cTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATg                                                                                                                                  >  2:2243131/1‑150 (MQ=255)
                  cTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATg                                                                                                                                  >  1:503745/1‑150 (MQ=255)
                           gTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCgcgcg                                                                                                                         >  1:1981070/1‑149 (MQ=255)
                           gTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGcc                                                                                                                         >  1:2061275/1‑150 (MQ=255)
                             gACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTa                                                                                                                                                   >  2:1681244/1‑122 (MQ=255)
                             gACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTa                                                                                                                                                   <  1:1681244/122‑1 (MQ=255)
                                ccTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCTGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCcag                                                                                                                    <  1:1309610/150‑1 (MQ=255)
                                  ggCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCCCACGCTAAAGGGGTGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCcagca                                                                                                                  <  2:1153088/149‑1 (MQ=255)
                                   gCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCcagca                                                                                                                  <  2:2215638/149‑1 (MQ=255)
                                   gCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCcagca                                                                                                                  >  1:2215638/1‑149 (MQ=255)
                                        aTGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAgc                                                                                                                                          >  2:817582/1‑120 (MQ=255)
                                        aTGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAgc                                                                                                                                          <  1:817582/120‑1 (MQ=255)
                                         tGGCGAGAAGGGCGGGTTGCGGGTGCGAGTGAGCTTTATCGCGGCCTGGTGGAACAGGGGGGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                           <  2:62561/150‑1 (MQ=255)
                                         gggCGAGAAGGGCGGGTTGCGGGTGCGGGTTAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCTCCCCTTGCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATc                                                                                                           <  2:85581/149‑1 (MQ=255)
                                             gagaAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGAcc                                                                                                       <  2:492614/150‑1 (MQ=255)
                                             gagaAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGAcc                                                                                                       >  1:492614/1‑150 (MQ=255)
                                               gaAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGAc                                                                                                        <  1:2171139/147‑1 (MQ=255)
                                               gaAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGAc                                                                                                        >  2:2171139/1‑147 (MQ=255)
                                                  gggCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTg                                                                                                                                                      >  2:233490/1‑98 (MQ=255)
                                                  gggCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTg                                                                                                                                                      <  1:233490/98‑1 (MQ=255)
                                                   ggCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCATCGCAACATGCTCCGCGCCTCCAGCAGTTCAt                                                                                                            <  1:866260/139‑1 (MQ=255)
                                                   ggCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCATCGCAACATGCTCCGCGCCTCCAGCAGTTCAt                                                                                                            >  2:866260/1‑139 (MQ=255)
                                                     cGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTAc                                                                                                                                                  <  1:859826/99‑1 (MQ=255)
                                                     cGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTAc                                                                                                                                                  >  2:859826/1‑99 (MQ=255)
                                                     cGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTc                                                                                               <  1:2243131/150‑1 (MQ=255)
                                                        gTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGt                                                                                            <  1:239609/150‑1 (MQ=255)
                                                               gtgcgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAAc                                                                                     <  2:1586290/150‑1 (MQ=255)
                                                                tgcgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACg                                                                                    <  2:948912/150‑1 (MQ=255)
                                                                tgcgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACg                                                                                    <  1:2052436/150‑1 (MQ=255)
                                                                 gcgggtgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACgg                                                                                   <  1:2185966/150‑1 (MQ=255)
                                                                      tgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGAc                                                                                                        <  1:1200989/124‑1 (MQ=255)
                                                                      tgAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGAc                                                                                                        >  2:1200989/1‑124 (MQ=255)
                                                                          cTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAg                                                                          >  2:1705924/1‑150 (MQ=255)
                                                                               tCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCcgc                                                                                                                            >  2:51387/1‑95 (MQ=255)
                                                                                   ggATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATg                                                                                                                                  >  2:2105851/1‑85 (MQ=255)
                                                                                   ggATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATg                                                                                                                                  <  1:2105851/85‑1 (MQ=255)
                                                                                     aTTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACg                                                               >  1:2250667/1‑150 (MQ=255)
                                                                                      ttGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGc                                                              >  2:2058270/1‑150 (MQ=255)
                                                                                        gATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACTCGCGACAGGGGCGACCCAGCCTGGTAAAGCCGAGCGCCACATGCTCCGCGCCTCCAGCAGCTCATCGACCTCCAGCCCGGTGCCAAACGGCAACCCCAGATGGCGGTGCGCCg                                                            >  2:241186/1‑150 (MQ=255)
                                                                                        gATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAccc                                                                             <  2:666511/133‑1 (MQ=255)
                                                                                        gATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAccc                                                                             >  1:666511/1‑133 (MQ=255)
                                                                                        gATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCg                                                            >  2:697006/1‑150 (MQ=255)
                                                                                         aTGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCgg                                                           >  1:1729150/1‑150 (MQ=255)
                                                                                           ggTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGt                                                                                            >  1:1013588/1‑115 (MQ=255)
                                                                                           ggTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGt                                                                                            <  2:1013588/115‑1 (MQ=255)
                                                                                            gTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAc                                                                               <  2:699312/127‑1 (MQ=255)
                                                                                            gTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAc                                                                               >  1:699312/1‑127 (MQ=255)
                                                                                             tttGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGgcagc                                                       >  2:2130052/1‑150 (MQ=255)
                                                                                                 CCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGgcagcgcag                                                   <  1:593304‑M1/150‑1 (MQ=255)
                                                                                                  CTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGgcagcgcagc                                                  <  1:611169‑M1/150‑1 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAg                                                                                                                                                <  1:77772‑M1/49‑1 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAg                                                                                                                                                >  2:77772‑M1/1‑49 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCg                                                                    >  2:784068‑M1/1‑125 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCg                                                                    <  1:784068‑M1/125‑1 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCg                                                                    <  2:410315‑M1/125‑1 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCg                                                                    >  1:410315‑M1/1‑125 (MQ=255)
                                                                                                         GCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGc                                           <  1:1217931‑M1/150‑1 (MQ=255)
                                                                                                          gcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGtt                                                                                                               <  1:120424‑M2/41‑1 (MQ=255)
                                                                                                          gcccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGtt                                                                                                               >  2:120424‑M2/42‑82 (MQ=255)
                                                                                                          CCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAc                                                                               <  1:315440‑M1/113‑1 (MQ=255)
                                                                                                          CCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAAc                                                                               >  2:315440‑M1/1‑113 (MQ=255)
                                                                                                           cccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACCGCTACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGcc                                          >  1:1191961‑M2/41‑150 (MQ=255)
                                                                                                           cccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGAGCCTCCAGAAGTTCATCGACCTCCAGCTCGGTGCCAGACCGCAACTCCAGATGGCGGGACGCCGGCAGCGCAGCCAATGGcc                                          >  2:1875228‑M2/41‑150 (MQ=255)
                                                                                                           CCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCg                                         <  2:790302‑M1/150‑1 (MQ=255)
                                                                                                           CCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCGGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATTGCGGTACGCCGGCAGCGCACCCAATGGCCg                                         >  2:1254531‑M1/1‑150 (MQ=255)
                                                                                                            ccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCAt                                                                                                            <  1:526176‑M2/44‑1 (MQ=255)
                                                                                                            ccctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCAt                                                                                                            >  2:526176‑M2/40‑83 (MQ=255)
                                                                                                            CCTTTCATG‑GGCTCACCCGCGAAAGGGGCTACACAGGCTGGTACAGCTCAGCGCAACATGCTc                                                                                                                               <  1:121860‑M1/63‑1 (MQ=255)
                                                                                                            CCTTTCATG‑GGCTCACCCGCGAAAGGGGCTACACAGGCTGGTACAGCTCAGCGCAACATGCTc                                                                                                                               >  2:121860‑M1/1‑63 (MQ=255)
                                                                                                             cctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCgg                                        >  1:957382‑M2/39‑150 (MQ=255)
                                                                                                             CTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGt                                       >  2:1008083‑M1/1‑150 (MQ=255)
                                                                                                             CTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGt                                       >  2:2061275‑M1/1‑150 (MQ=255)
                                                                                                              ctttcgcgggtgagcccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGt                                       >  1:322456‑M2/38‑150 (MQ=255)
                                                                                                                  aTG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCt                                                                                                                        <  2:1291151/64‑1 (MQ=255)
                                                                                                                  aTG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCt                                                                                                                        >  1:1291151/1‑64 (MQ=255)
                                                                                                                   gcgggtgagtccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGa                                                                         <  2:1986264‑M2/79‑1 (MQ=255)
                                                                                                                   gcgggtgagtccatgaaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGa                                                                         >  1:1986264‑M2/33‑111 (MQ=255)
                                                                                                                       gCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCcgc                              <  2:593304/150‑1 (MQ=255)
                                                                                                                            cccGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGctga                         <  2:1981070/150‑1 (MQ=255)
                                                                                                                             ccGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTg                                      <  2:1439001/136‑1 (MQ=255)
                                                                                                                             ccGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTg                                      >  1:1439001/1‑136 (MQ=255)
                                                                                                                                  aaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATg                   <  2:957382‑M2/133‑1 (MQ=255)
                                                                                                                                  aaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATg                   >  1:1198590‑M2/18‑150 (MQ=255)
                                                                                                                                  aaaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATg                   <  1:1705924‑M2/133‑1 (MQ=255)
                                                                                                                                   aaggggcgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGc                  >  1:2016656‑M2/17‑150 (MQ=255)
                                                                                                                                         cgacacaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCggg            <  2:1988527‑M2/140‑1 (MQ=255)
                                                                                                                                             acaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCg              <  1:1303083‑M2/138‑1 (MQ=255)
                                                                                                                                             acaggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCg              >  2:1303083‑M2/7‑144 (MQ=255)
                                                                                                                                               aggcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCt      >  1:1774109‑M2/5‑150 (MQ=255)
                                                                                                                                                 gcTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGc    <  1:697006‑M2/148‑1 (MQ=255)
                                                                                                                                                   tGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGCAc  >  2:822700/1‑150 (MQ=255)
                                                                                                                                                   tGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGCAc  >  1:2063317/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                     
GAGATCTGTCGGGCGCACCTGGCGCAAGTGACCCTGCACGATGGCGAGAAGGGCGGGTTGCGGGTGCGGGTGAGCTTTATCGCGGATTGATGGTTTGCCTGTGTCGCCCCTTTCATG‑GGCTCACCCGCGAAAGGGGCGACACAGGCTGGTACAGCTCAGCGCAACATGCTCCGCGCCTCCAGCAGTTCATCGACCTCCAGCTCGGTGCCAAACGGCAACCCCAGATGGCGGTACGCCGGCAGCGCAGCCAATGGCCGGTGACGCCCGCGCTGACTGATGCAGCGGGCGATCTGCAC  >  NC_002947/1622431‑1622726

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.