New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 1899249 =87 (0.990)10 (0.120) 7/228 NT 10.1% intergenic (+277/‑243) PP_t18/PP_1703 tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase
?NC_002947 1899331 = 99 (1.220)intergenic (+359/‑161) PP_t18/PP_1703 tRNA‑Asp/assimilatory nitrate reductase/sulfite reductase

Only 100 of 134 total aligned reads displayed.

ATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACA  >  NC_002947/1899182‑1899480
                                                                                                                                                     |                                                                                                                                                      
 ttGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAg                                                                                                                                                       <  2:616478/150‑1 (MQ=255)
 ttGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAg                                                                                                                                                       <  1:361722/150‑1 (MQ=255)
  tGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAgg                                                                                                                                                      <  1:299507/150‑1 (MQ=255)
    ccccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                                                                                                    >  2:1038661/1‑150 (MQ=255)
    ccccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGc                                                                                                                                                    <  1:128820/150‑1 (MQ=255)
     cccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGcc                                                                                                                                                   >  1:826006/1‑150 (MQ=255)
     cccAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCCCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGcc                                                                                                                                                   >  1:2254454/1‑150 (MQ=255)
          cAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGtat                                                                                                                                              <  1:1282324/150‑1 (MQ=255)
                gcCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTgg                                                                                                                                        >  1:2067155/1‑150 (MQ=255)
                gcCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTgg                                                                                                                                        <  2:13233/150‑1 (MQ=255)
                cccggggAGCATGCGGTTGCCACCGCATGGTGCGTAACCTGTATGAGCCTCGTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTgg                                                                                                                                        <  1:1421784/146‑1 (MQ=37)
                  cTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGtata                                                                                                                                             <  2:1525829/143‑1 (MQ=255)
                  cTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGtata                                                                                                                                             >  1:1525829/1‑143 (MQ=255)
                  cTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGcc                                                                                                                                      >  1:1909057/1‑150 (MQ=255)
                   tGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCAGGTATAGCTGGccc                                                                                                                                     <  1:716778/150‑1 (MQ=255)
                    gggAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCg                                                                                                                                                  <  1:2275069/136‑1 (MQ=255)
                     ggAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCAt                                                                                                                                   >  1:1749740/1‑150 (MQ=255)
                             aGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                                           <  2:1453984/150‑1 (MQ=255)
                             aGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                                           <  2:140257/150‑1 (MQ=255)
                             aGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                                           <  1:1675377/150‑1 (MQ=255)
                                   ccACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTa                                                                                                                     >  1:1884991/1‑150 (MQ=255)
                                    cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                                                                                                    <  1:1038661/150‑1 (MQ=255)
                                    cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                                                                                                    >  2:1167757/1‑150 (MQ=255)
                                    cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATACCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                                                                                                    >  2:662105/1‑150 (MQ=255)
                                    cACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACCCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCCATATCCCTGTGGGCGCGGGCNTGCCCGNGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAc                                                                                                                    <  1:1413450/150‑1 (MQ=255)
                                     aCCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAcc                                                                                                                   >  2:1294939/1‑150 (MQ=255)
                                     aCCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAcc                                                                                                                   <  2:2067155/150‑1 (MQ=255)
                                        gCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCa                                                                                                                <  2:826006/150‑1 (MQ=255)
                                                 gTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCt                                                                                                       >  2:2060275/1‑150 (MQ=255)
                                                   aaCCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGt                                                                                                     >  1:473224/1‑150 (MQ=255)
                                                    agctataccggccctttcgcgggcatgcccgctcccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcgtgcccgcgaaAg                                                                                                                                                       <  2:591730‑M2/2‑1 (MQ=255)
                                                     ccTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCAAAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCa                                                                                                   >  2:1835246/1‑150 (MQ=255)
                                                      cTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATATCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCa‑a                                                                                                 <  1:317226/150‑1 (MQ=255)
                                                          gCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGtt                                                                                             <  1:1835246/150‑2 (MQ=255)
                                                             ggCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGATACAGCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGAc                                                                                          <  1:1194429/150‑1 (MQ=255)
                                                              gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCTGCCCTCAGGTCTTGCGATATCCCTGTGCGACCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGGCGACa                                                                                         <  2:1225163/150‑1 (MQ=38)
                                                              gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTc                                                                                             <  1:815676/146‑1 (MQ=255)
                                                              gCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTc                                                                                             >  2:815676/1‑146 (MQ=255)
                                                                 tctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTGCTCCTTCCCGGGCTGTCA‑ACGTCGACAGcc                                                                                      <  1:1814673/150‑1 (MQ=255)
                                                                 tctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGcc                                                                                      <  1:764787/150‑1 (MQ=255)
                                                                 tctTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGcc                                                                                      <  1:1910132/150‑1 (MQ=255)
                                                                 ctTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCt                                                                                                                                          >  1:591730‑M1/3‑99 (MQ=255)
                                                                      gcgggcatgcccgctcccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcgtgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTcac                                                                                 >  2:1361269‑M2/80‑150 (MQ=255)
                                                                      GCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCACGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTcac                                                                                 >  2:671649‑M1/1‑150 (MQ=255)
                                                                        GGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATc                                                                                                              <  1:177168‑M1/120‑1 (MQ=255)
                                                                             cGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCTAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCa                                                                          <  1:1210073/150‑1 (MQ=255)
                                                                                      ccacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcatgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCATTAACAATTCACGACAAAgg                                                                 >  2:425739‑M2/64‑150 (MQ=255)
                                                                                      ccACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAgg                                                                 >  1:1624847/1‑150 (MQ=255)
                                                                                       cacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcatgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑Ac                                                                                                >  2:1771223‑M2/63‑118 (MQ=255)
                                                                                       cacagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcatgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑Ac                                                                                                <  1:1771223‑M2/56‑1 (MQ=255)
                                                                                        acagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcgtgcccgcgaaGGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACaaa                                                                   <  2:220642‑M2/85‑1 (MQ=255)
                                                                                        acagggatatcgcaaggcctgagggcggcgcagtacctgtgggagcgggcgtgcccgcgaaGGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACaaa                                                                   >  1:220642‑M2/62‑146 (MQ=255)
                                                                                         caGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGgcgc                                                              <  2:1909057/150‑1 (MQ=255)
                                                                                          aGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGcc                                                             >  1:484119/1‑150 (MQ=255)
                                                                                          aGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGcc                                                             <  2:229893/150‑1 (MQ=255)
                                                                                          aGGTACCGCCCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCCTCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGcc                                                             <  1:2093014/150‑1 (MQ=255)
                                                                                            gTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCTCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCTCGCCGGTCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCgt                                                           <  1:1228026/150‑1 (MQ=255)
                                                                                            gTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCgt                                                           <  2:473224/150‑1 (MQ=255)
                                                                                                tGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAcc                                                                                                                   <  2:1770381/91‑1 (MQ=255)
                                                                                                tGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTAcc                                                                                                                   >  1:1770381/1‑91 (MQ=255)
                                                                                                tGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGTCGTGTTg                                                       >  2:1853189/1‑150 (MQ=255)
                                                                                                  cgccgcCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGcc                                                     <  2:2059980/150‑1 (MQ=255)
                                                                                                  cgcaaggcctgagggcggcgcagtacctgtgggagcgggcgtgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGcc                                                     <  1:1361269‑M2/99‑1 (MQ=255)
                                                                                                   gccgccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGccc                                                    >  1:1362686/1‑150 (MQ=255)
                                                                                                      gccCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGCCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGc                                                 >  1:2261423/1‑150 (MQ=255)
                                                                                                        ccTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAgg                                                                 <  2:1091548/132‑1 (MQ=255)
                                                                                                        ccTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAgg                                                                 >  1:1091548/1‑132 (MQ=255)
                                                                                                         cTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGccc                                                                                                                                     <  2:726747/64‑1 (MQ=255)
                                                                                                              gCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCa                                         >  1:2191158/1‑150 (MQ=255)
                                                                                                                cTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                                           >  1:1414397/1‑67 (MQ=255)
                                                                                                                cTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCt                                                                                                                           <  2:1414397/67‑1 (MQ=255)
                                                                                                                cTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCAc                                                                         <  2:1739607/116‑1 (MQ=255)
                                                                                                                cTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCAc                                                                         >  1:1739607/1‑116 (MQ=255)
                                                                                                                 ttGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCa                                      >  2:166384/1‑150 (MQ=255)
                                                                                                                   gCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATg                                    <  1:2033071/150‑1 (MQ=255)
                                                                                                                     gATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGcc                                  >  1:1506053/1‑150 (MQ=255)
                                                                                                                        atCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCggg                               <  2:1527131/150‑1 (MQ=255)
                                                                                                                         ccccAGTGGGAGCGGGCATGCCCGCGAAATGGCCGGTATAGCTGGCCCATAACTTCCTGATCTAACTCATCCC‑GGCAGTTACACCTCGACACCCCTCACCTCTTCCCGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCACGCCgggg                              <  2:247230/149‑1 (MQ=255)
                                                                                                                           ccTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGt                                                                                                     <  1:2030860/78‑1 (MQ=255)
                                                                                                                           ccTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGt                                                                                                     >  2:2030860/1‑78 (MQ=255)
                                                                                                                           ccTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTc                                                                           >  2:1890981/1‑103 (MQ=255)
                                                                                                                           ccTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTc                                                                           <  1:1890981/103‑1 (MQ=255)
                                                                                                                           ccTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCgg                                >  1:1066177/1‑146 (MQ=255)
                                                                                                                           ccTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCgg                                <  2:1066177/146‑1 (MQ=255)
                                                                                                                            cTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAg                           >  2:308377/1‑150 (MQ=255)
                                                                                                                              gtgGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCg                                 >  2:1352661/1‑142 (MQ=255)
                                                                                                                              gtgGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCg                                 <  1:1352661/142‑1 (MQ=255)
                                                                                                                              cctttcgCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGcc                         >  2:1568454/7‑150 (MQ=255)
                                                                                                                                  gAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGgcgc                                                              <  2:1789167/109‑1 (MQ=255)
                                                                                                                                  gAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGgcg                     >  1:1267691/1‑150 (MQ=255)
                                                                                                                                   aGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACa                                                                                         <  1:1584202/81‑1 (MQ=255)
                                                                                                                                   aGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACa                                                                                         >  2:1584202/1‑81 (MQ=255)
                                                                                                                                        gCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTcac                                                                                 >  2:2247883/1‑84 (MQ=255)
                                                                                                                                        gCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGc                                                 <  2:592525/116‑1 (MQ=255)
                                                                                                                                        gCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGc                                                 >  1:592525/1‑116 (MQ=255)
                                                                                                                                           tgcccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGc            <  2:44291‑M2/140‑1 (MQ=255)
                                                                                                                                              ccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGtt         >  1:1515678‑M2/8‑150 (MQ=255)
                                                                                                                                              ccgcgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGtt         <  1:1568454‑M2/143‑1 (MQ=255)
                                                                                                                                                 cgaaAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTc      <  2:2254454‑M2/146‑1 (MQ=255)
                                                                                                                                                     aGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCcaca  <  2:1506053/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
ATTGCCCCAGCAAAGCGCCTGGGAGCATGAGGTTGCCACCGCATGGTGCGTAACCTGTGCAGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCGCCGCCCTCAGGCCTTGCGATATCCCTGTGGGAGCGGGCATGCCCGCGAAAGGGCCGGTATAGCTGGCCCATAAATTGCTGATCTACCTCATCCCGGGCTGTCA‑ACGTCGACAGCCCTCACCACTTCACGACAAAGGCGCCGTGTTGCCCCGCTTGCATCAGCATGCCGGGGCAGCCGGCGCCTTTTTGCGTTTTCCACA  >  NC_002947/1899182‑1899480

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.