New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2099990 =	98 (1.110)	7 (0.080)	6/248	NT	7.7%	intergenic (‑58/‑147)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein
	?	NC_002947	2100111 =	69 (0.780)					intergenic (‑179/‑26)	PP_1875/PP_1876	two‑component system sensor histidine kinase/response regulator/AAA family ATP/GTP‑binding protein

TCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGCCGCGCGCTG  >  NC_002947/2099964‑2100255                                                                                                                                                      |                                                                                                                                                 tctgtTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCaaaa                                                                                                                                                >  1:778946/1‑150 (MQ=255)     ttCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAAAG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACt                                                                                                                                            >  1:24814/1‑150 (MQ=255)     ttCATTTCAGTTGATCGCCAAGAGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACt                                                                                                                                            >  2:583798/1‑150 (MQ=255)       cATTCCAGTTGACCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTga                                                                                                                                          <  2:2269003/150‑1 (MQ=255)        aTTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTgag                                                                                                                                         <  2:198479/150‑1 (MQ=255)         tttCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTgaga                                                                                                                                        <  2:946531/150‑1 (MQ=255)             aGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGt                                                                                                                                    >  1:643508/1‑150 (MQ=255)               ttGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTa                                                                                                                                  <  1:1925055/150‑1 (MQ=255)                tGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAg                                                                                                                                 <  1:2107910/150‑1 (MQ=255)                     gCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCTG‑CCCCCAAAAAACTGAGATTGTTAGGAggc                                                                                                                            >  2:2275942/1‑148 (MQ=255)                             ggggCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGa                                                                                                                    <  2:643508/150‑1 (MQ=255)                                   gCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcg                                                                                                              >  2:1590606/1‑150 (MQ=255)                                            cccTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTCGGTGACGCGTCCACA‑TCACCCTCGTGTGAGCGGACAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGc                                                                                                     >  1:43534/1‑150 (MQ=255)                                             ccTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCt                                                                                                    >  1:507301/1‑150 (MQ=255)                                                 cgcgGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTa                                                                                                                                  >  2:259605/1‑116 (MQ=255)                                                 cgcgGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTa                                                                                                                                  <  1:259605/116‑1 (MQ=255)                                                        ttGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTAAACG‑CAAGCCCTGTGGGATCGCGCAAGCCCGCGGA‑GGGCACACGTCTGAACTCCAGTAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTGTCTGGACcg                                                                                         >  1:2280458/1‑150 (MQ=255)                                                        gcttgcccgctcccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgccaagcggcccccgAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTctggcc                                                                                           >  2:1221353‑M2/95‑148 (MQ=255)                                                            ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgc                                                                                                             >  1:79191/1‑126 (MQ=255)                                                            ccGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGAcgctcgc                                                                                                             <  2:79191/126‑1 (MQ=255)                                                            ccGTTCCCACAGGTACAGCTTAGCCCCAGGC‑AAACGCCAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGcc                                                                                     >  1:1716491/1‑150 (MQ=255)                                                             cGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCg                                                                                    >  2:1176387/1‑150 (MQ=255)                                                               ttCCCACAGGTACAGCTTAGGCCCAGGCTGAGCG‑CTAGCCCTGGGGGAGCGGGCATGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGGCATGGACGCTCGCTTGTTCGCTTTTCTGGACCGCGCCGaa                                                                                  <  2:5634/150‑1 (MQ=255)                                                                  ccACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg                                                                               >  2:868971/1‑150 (MQ=255)                                                                  ccACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCg                                                                               >  2:865256/1‑150 (MQ=255)                                                                   cacgGGTAAGGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg                                                                              >  2:1256166/1‑150 (MQ=255)                                                                   cacaGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg                                                                              <  2:24814/150‑1 (MQ=255)                                                                    ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcgcagcggcccccaAAAAACTGAGATTGtt                                                                                                                                   >  1:1357865‑M2/83‑98 (MQ=255)                                                                    ccacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcgcagcggcccccaAAAAACTGAGATTGtt                                                                                                                                   <  2:1357865‑M2/16‑1 (MQ=255)                                                                     cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgcgcagcggcccccaAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCgg                                                                              >  1:1609558‑M2/82‑150 (MQ=255)                                                                     cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgccaagcggcccccgAAAAACTGAGATTGTTAGGAGTCGTCa                                                                                                                        >  1:1591249‑M2/82‑108 (MQ=255)                                                                     cacagggcttgcgttcagcctggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgccaagcggcccccgAAAAACTGAGATTGTTAGGAGTCGTCa                                                                                                                        <  2:1591249‑M2/27‑1 (MQ=255)                                                                            aGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGTCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGgcgc                                                                     >  2:2116374/1‑150 (MQ=255)                                                                               ttAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTg                                                                                              <  2:537869/122‑1 (MQ=255)                                                                               ttAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTg                                                                                              >  1:537869/1‑122 (MQ=255)                                                                                 aGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCtt                                                                <  1:865256/150‑1 (MQ=255)                                                                                   ccccAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGa                                                              >  2:1536946/1‑150 (MQ=255)                                                                                     ccAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAg                                                                                                                                 <  2:1943430/81‑1 (MQ=255)                                                                                     ccAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAg                                                                                                                                 >  1:1943430/1‑81 (MQ=255)                                                                                     ccAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCAt                                                                                                                       >  1:1435140/1‑91 (MQ=255)                                                                                     ccAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCAt                                                                                                                       <  2:1435140/91‑1 (MQ=255)                                                                                     ccAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAc                                                            >  2:492482/1‑150 (MQ=255)                                                                                         gCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCt                                                        <  1:583798/150‑1 (MQ=255)                                                                                          ggggctaagctgtacctgtgggaacgggcaagcccgcggaggggcgccaagcggcccccgAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAAcccc                                                         <  1:1221353‑M2/90‑1 (MQ=255)                                                                                          cTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCTG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTg                                                       <  1:2275942/150‑1 (MQ=255)                                                                                           tGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCtt                                                                                                           >  2:1365084/1‑97 (MQ=255)                                                                                           tGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCtt                                                                                                           <  1:1365084/97‑1 (MQ=255)                                                                                            gAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGtt                                                     <  2:778946/150‑1 (MQ=255)                                                                                              aCG‑CCAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGttat                                                   <  1:1835353/150‑3 (MQ=255)                                                                                                  cAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGATCCCCTGTTGCCgg                                                <  2:1893941/150‑1 (MQ=255)                                                                                                     gCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGcac                                             <  2:2280458/150‑1 (MQ=255)                                                                                                       ccTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACaa                                           <  1:1536946/150‑1 (MQ=255)                                                                                                        cTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAAc                                          >  1:424556/1‑150 (MQ=255)                                                                                                           tgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCtt                                                                                                   <  2:815760/90‑1 (MQ=255)                                                                                                           tgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCtt                                                                                                   >  1:815760/1‑90 (MQ=255)                                                                                                           tgGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGcc                                       >  2:1903230/1‑150 (MQ=255)                                                                                                            gggAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGccc                                      >  1:2070574/1‑150 (MQ=255)                                                                                                              gAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGc                                    >  2:2231881/1‑150 (MQ=255)                                                                                                                gCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGcac                                  >  1:2216440/1‑150 (MQ=255)                                                                                                                  gggCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACAt                                >  2:542512/1‑150 (MQ=255)                                                                                                                   ggCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCt                                                                 <  2:1747403/116‑1 (MQ=255)                                                                                                                   ggCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCt                                                                 >  1:1747403/1‑116 (MQ=255)                                                                                                                    gCAAGCCCGCGGCGGGGCGCGCAGCGG‑CACCCAAAAAACTGAGATTGTTGGGAATCGGCATGGACGCGCGCTTGATCGCTTTTATTGAACGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTTCCGGCAGAACGCCCGCGCATCg                              >  2:403962/1‑150 (MQ=255)                                                                                                                    gCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGAtt                                                                                                                                      >  1:1712859/1‑46 (MQ=255)                                                                                                                    gCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGAtt                                                                                                                                      <  2:1712859/46‑1 (MQ=255)                                                                                                                      aaGCCCGCGGAGGGGCGCGCAGCGG‑CCACCAAAAAACTGAGATTGTTAGTAGTCGTCATGGACGCTCCCTTGATCTCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGAc                            <  1:868971/150‑1 (MQ=255)                                                                                                                       aGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACt                           <  1:1590606/150‑1 (MQ=255)                                                                                                                        gCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTg                          >  1:517530/1‑150 (MQ=255)                                                                                                                              ggAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGGCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcac                    <  2:507301/150‑1 (MQ=255)                                                                                                                               gAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcacc                   >  1:1547672/1‑150 (MQ=255)                                                                                                                               gAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGcacc                   <  2:1609558/150‑1 (MQ=255)                                                                                                                                  gggCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGACTCGGTACTGGCGCGCCTTGAACCCCTGTTGCTGGCACAACGCCCGCACATCGGAGGGAGCACcaca                >  1:326727/1‑150 (MQ=255)                                                                                                                                    gcgcgcAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACt              >  1:201089/1‑150 (MQ=255)                                                                                                                                      gcgcAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTgg            >  2:742396/1‑150 (MQ=255)                                                                                                                                      gcgcAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTgg            <  2:2216440/150‑1 (MQ=255)                                                                                                                                      gcgcAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTgg            <  1:542512/150‑1 (MQ=255)                                                                                                                                                cccccAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGCCGCGCGCt   <  1:492482/150‑1 (MQ=255)                                                                                                                                                 ccccAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGCCGCGCGCTg  <  2:2070574/150‑1 (MQ=255)                                                                                                                                                      |                                                                                                                                                 TCTGTTCATTTCAGTTGATCGCCAAGCGGGGGCCGCTTGGCGCCCCTCCGCGGGCTTGCCCGTTCCCACAGGTACAGCTTAGCCCCAGGCTGAACG‑CAAGCCCTGTGGGAGCGGGCAAGCCCGCGGAGGGGCGCGCAGCGG‑CCCCCAAAAAACTGAGATTGTTAGGAGTCGTCATGGACGCTCGCTTGATCGCTTTTCTGGACCGCGCCGAATCGGTACTGGCGCGCCTTGAACCCCTGTTGCCGGCACAACGCCCGCACATCGACTGGGGCACCACACTGGCCGCGCGCTG  >  NC_002947/2099964‑2100255

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.