New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 563908575 (0.850)4 (0.050) 3/238 NT 5.1% coding (126/1320 nt) PP_4950 hypothetical protein
?NC_002947 = 5639112 77 (0.910)coding (153/1320 nt) PP_4950 hypothetical protein

GCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTG  >  NC_002947/5638965‑5639259
                                                                                                                                                   |                                                                                                                                                    
gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgg                                                                                                                                                    <  2:2185743‑M2/150‑3 (MQ=255)
gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgc                                                                                                                                                    <  1:1757653‑M2/150‑3 (MQ=255)
gCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgc                                                                                                                                                    <  1:2077632‑M2/150‑3 (MQ=255)
   cGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgca                                                                                                                                                 <  1:1482523‑M2/150‑6 (MQ=255)
      tttCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACt                                                                                                                                              >  1:1537406/1‑150 (MQ=255)
          gAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCgg                                                                                                                                          >  1:675321/1‑150 (MQ=255)
          gAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCgg                                                                                                                                          >  1:126552/1‑150 (MQ=255)
              cccTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTgg                                                                                                                                      <  2:2259433/150‑1 (MQ=255)
                 tGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTgc                                                                                                                                   >  2:203537/1‑150 (MQ=255)
                          aGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGgc                                                                                                                          >  2:1458059/1‑150 (MQ=255)
                          aGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGgc                                                                                                                          <  1:210962/150‑1 (MQ=255)
                             tGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGcc                                                                                                                       <  1:1413264/150‑1 (MQ=255)
                               cACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAg                                                                                                                     <  1:1085232/150‑1 (MQ=255)
                                aCGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAgg                                                                                                                    >  2:2268977/1‑150 (MQ=255)
                                 cgccgcCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGc                                                                                                                   <  1:2268977/150‑1 (MQ=255)
                                  gccgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCg                                                                                                                  >  1:859154/1‑150 (MQ=255)
                                  gccgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCg                                                                                                                  >  1:859177/1‑150 (MQ=255)
                                  gccgccCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCg                                                                                                                  <  1:2234939/150‑1 (MQ=255)
                                           cAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcagcag                                                                                                         <  1:131424/150‑1 (MQ=255)
                                             ggcgggcgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGt                                                                                                       <  2:1482523/150‑1 (MQ=255)
                                               cgggcgAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGa                                                                                                     <  1:1748791/150‑1 (MQ=255)
                                                    gAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTg                                                                                                >  1:547184/1‑150 (MQ=255)
                                                       cAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAgg                                                                                                        <  1:915725/139‑1 (MQ=255)
                                                       cAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAgg                                                                                                        >  2:915725/1‑139 (MQ=255)
                                                        aGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAgcg                                                                                           <  1:203537/150‑1 (MQ=255)
                                                            cACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGa                                                                                       <  2:39902/150‑1 (MQ=255)
                                                               ccTCGGTTCCAGCAACGAGCAATTGCAGTTCGTGCGTTTCAACCATGGCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGGGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGt                                                                                    >  2:1153925/1‑150 (MQ=255)
                                                               ccTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGt                                                                                    >  1:641963/1‑150 (MQ=255)
                                                                 tCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAATGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGc                                                                                  >  2:882758/1‑150 (MQ=255)
                                                                    gTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAAc                                                                               <  1:824119/150‑1 (MQ=255)
                                                                       aCAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTgg                                                                            <  1:957760/150‑1 (MQ=255)
                                                                              cGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGa                                                                           <  1:364796/144‑1 (MQ=255)
                                                                              cGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGa                                                                           >  2:364796/1‑144 (MQ=255)
                                                                               gAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAg                                                                    >  2:1855975/1‑150 (MQ=255)
                                                                                     tCGCACTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCGGGCGACGTCAGCCAGTACAGCCAGAAACCGCGGCTCGTGCGCGATAGGCGCCAGGCGGAACAGCAGGTAGCCTTGAGCGGCGTCGTCCAACTGGAGCGCCAGCGCCTg                                                              >  2:199195/1‑150 (MQ=255)
                                                                                       gCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGt                                                                                                                                     <  1:317673/78‑1 (MQ=255)
                                                                                       gCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGt                                                                                                                                     >  2:317673/1‑78 (MQ=255)
                                                                                           ttCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGtt                                                        <  1:409065/150‑1 (MQ=255)
                                                                                           ttCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGtt                                                        <  2:1757653/150‑1 (MQ=255)
                                                                                           ttCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGtt                                                        >  2:968064/1‑150 (MQ=255)
                                                                                              gTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcg                                                     >  1:511229/1‑150 (MQ=255)
                                                                                              gTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcg                                                     >  2:604597/1‑150 (MQ=255)
                                                                                               tGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcg                                                                                <  1:1502379‑M2/123‑71 (MQ=255)
                                                                                               tGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcg                                                                                >  2:1502379‑M2/1‑53 (MQ=255)
                                                                                               tGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                                                    >  2:224690/1‑150 (MQ=255)
                                                                                               tGCGTTTCAACCATGCCAACGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                                                    <  2:1537406/150‑1 (MQ=255)
                                                                                                tcGTTTCAAACATGCCAAGATGCGCCAGACCGACGAAGTCAGCCAGGCCATCGCGCAACTGCGGCTGGTGCTCGATGGGCGCCAGGCGGAACAGCAGGTGATCTTGAGCGGCGACGTGCCACTGGATCGCCAGCGCCTGAACGTTGCGCt                                                   <  1:1132044/149‑1 (MQ=255)
                                                                                                 cGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTc                                                  <  2:991645/150‑1 (MQ=255)
                                                                                                  gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGaa                                                                                                               <  1:342113/89‑1 (MQ=255)
                                                                                                  gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGaa                                                                                                               >  2:342113/1‑89 (MQ=255)
                                                                                                  gTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGAAGTGCAACTGGATTGCTAGCGCCTGAACGGTGCGCTca                                                 >  2:1132044/1‑149 (MQ=255)
                                                                                                    ttCAACCATGCCAATGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGag                                               <  1:882758/150‑1 (MQ=255)
                                                                                                       aaCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCt                                                               <  1:791418/131‑1 (MQ=255)
                                                                                                       aaCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCt                                                               >  2:791418/1‑131 (MQ=255)
                                                                                                       aaCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcag                                            >  1:272326/1‑150 (MQ=255)
                                                                                                        aCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcagc                                           >  2:1562207/1‑150 (MQ=255)
                                                                                                        aCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcagc                                           >  2:2243801/1‑150 (MQ=255)
                                                                                                        aCCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGagcagc                                           >  1:1120428/1‑150 (MQ=255)
                                                                                                         ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcag                                                                                                            <  2:700/85‑1 (MQ=255)
                                                                                                         ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAAcag                                                                                                            >  1:700/1‑85 (MQ=255)
                                                                                                         ccATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCt                                          <  2:547184/150‑1 (MQ=255)
                                                                                                           aTGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTgc                                        <  2:272326/150‑1 (MQ=255)
                                                                                                            tGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGc                                                                       >  1:1390722/1‑118 (MQ=255)
                                                                                                            tGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGc                                                                       <  2:1390722/118‑1 (MQ=255)
                                                                                                              ccAAGGTGCGCCAGGCCGGCGAAGTCAGCAAGGCCAGCGCACAACGGCGGCTGGGGTGCGATGGGCGCCAGGCGGCCACCGTCTTGCCGCGGGTCCGCTACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGcc                                     >  1:1113545/1‑150 (MQ=255)
                                                                                                               cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCTGcgcaccttg                                                                                                                                              <  1:611976‑M2/46‑10 (MQ=255)
                                                                                                               cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCTGcgcaccttg                                                                                                                                              >  2:611976‑M2/1‑37 (MQ=255)
                                                                                                               cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                                                    <  2:1264072/134‑1 (MQ=255)
                                                                                                               cAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTgcgc                                                    >  1:1264072/1‑134 (MQ=255)
                                                                                                                  ggTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCTAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGAc                                 <  1:1245354/150‑1 (MQ=255)
                                                                                                                  ggTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGAc                                 >  2:1773672/1‑150 (MQ=255)
                                                                                                                   gTTCGCCAGGCCGGCGAAGTCAGCCAGGC‑‑‑caccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagcgtgctt                               <  2:883760‑M2/150‑121 (MQ=255)
                                                                                                                   gTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCgcgcaccttggcatggttgaaacgcacgaactgcgattgctcggcactgtaaccgagggtgaactgctcgcccgcctgaagggcggcgtgcacctccccgaccagggtttcgaaagc                                 <  2:1325207‑M2/150‑118 (MQ=255)
                                                                                                                     gcgcCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCtt                              >  1:852916/1‑150 (MQ=255)
                                                                                                                       gcCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGc                            <  2:378268/150‑1 (MQ=255)
                                                                                                                        ccAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGcc                           >  1:1626803/1‑150 (MQ=255)
                                                                                                                        ccAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGcc                           >  1:819862/1‑150 (MQ=255)
                                                                                                                            gCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCgctg                       <  1:1562207/150‑1 (MQ=255)
                                                                                                                              cGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGGTGCGCTCGAGCAGCTGCGCCAGACCTTGCCgctgct                     <  1:1852792/150‑1 (MQ=255)
                                                                                                                               ggCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGctgctg                    <  2:1626803/150‑1 (MQ=255)
                                                                                                                               ggCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGctgctg                    >  1:2112763/1‑150 (MQ=255)
                                                                                                                                 cGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGgc                  <  1:1855975/150‑1 (MQ=255)
                                                                                                                                       cAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGa            <  1:224690/150‑1 (MQ=255)
                                                                                                                                       cAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGa            <  2:859177/150‑1 (MQ=255)
                                                                                                                                       cAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGa            <  2:859154/150‑1 (MQ=255)
                                                                                                                                          ccaggccagCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGAccc         >  2:663551/1‑150 (MQ=255)
                                                                                                                                           caggccagCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCt        >  1:801091/1‑150 (MQ=255)
                                                                                                                                            aggccagCGAGCAAGTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGGCAGACCTTGCCGCTGCTGGCGCTCGACCCtt       >  2:161544/1‑150 (MQ=255)
                                                                                                                                                 agCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGAGAGCGCCTGCACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTg  >  1:1210474/1‑150 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
GCACGCTTTCGAAACCCTGGTCGGGGAGGTGCACGCCGCCCTTCAGGCGGGCGAGCAGTTCACCCTCGGTTACAGTGCCGAGCAATCGCAGTTCGTGCGTTTCAACCATGCCAAGGTGCGCCAGGCCGGCGAAGTCAGCCAGGCCAGCGCGCAACTGCGGCTGGTGCGCGATGGGCGCCAGGCGGAACAGCAGGTGACCTTGAGCGGCGACGTGCAACTGGATCGCCAGCGCCTGAACGTTGCGCTCGAGCAGCTGCGCCAGACCTTGCCGCTGCTGGCGCTCGACCCTTACCTG  >  NC_002947/5638965‑5639259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.