| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 572,521 | A→G | 6.3% | I191T (ATC→ACC) | PP_0486 ← | GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 572,521 | 0 | A | G | 6.3% | 325.3 / 7.6 | 112 | I191T (ATC→ACC) | PP_0486 | GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (48/56); new base G (5/2); total (53/59) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.61e-01 | |||||||||||
Only 100 of 113 total aligned reads displayed.
GGCCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAG > NC_002947/572373‑572670 | ggcCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGAt < 2:1285856/150‑1 (MQ=255)ggcCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGAt < 1:1963960/150‑1 (MQ=255) gcCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATg < 1:1028866/150‑1 (MQ=255) gcCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATg > 2:935434/1‑150 (MQ=255) gcCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATg < 2:463747/150‑1 (MQ=255) gcCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATg < 1:935434/150‑1 (MQ=255) cgcgcAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGcca > 1:873718/1‑150 (MQ=255) cgcgcAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGcca < 1:1165977/150‑1 (MQ=255) gcgcAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGGTGGccat > 1:2108672/1‑149 (MQ=255) gcgcAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGccac > 1:49011/1‑150 (MQ=255) gcgcAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGccac < 1:2237087/150‑1 (MQ=255) cTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGccc < 2:953369/150‑1 (MQ=255) cTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGccc < 2:49011/150‑1 (MQ=255) cGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGGTGGCCATCAGCAGcctgtc < 2:2108672/150‑5 (MQ=255) tGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCGAGGTGTGCGCACACTG‑TAGCAAGGTCGTTGAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATTTTggg < 1:275082/150‑1 (MQ=255) gCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGgcgc > 1:1644272/1‑150 (MQ=255) gCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGgcgc > 1:2290352/1‑150 (MQ=255) cccGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGcc > 2:198252/1‑150 (MQ=255) gtTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCgg < 2:873718/150‑1 (MQ=255) tCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGt > 1:1840655/1‑150 (MQ=255) cATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATg > 1:380610/1‑112 (MQ=255) cATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtac > 1:204211/1‑150 (MQ=255) aTGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtact > 1:1554950/1‑150 (MQ=255) aTGGCGACGCCGCGCAGCCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtact > 2:1197795/1‑150 (MQ=255) tGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtacta > 2:1901129/1‑150 (MQ=255) tGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtacta < 2:1996861/150‑1 (MQ=255) ggCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtactac < 2:204211/150‑1 (MQ=255) ggCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtactac < 1:1028677/150‑1 (MQ=255) cgccgcGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACctgct < 2:1644272/150‑1 (MQ=255) aGGCGCCGGCCCAGGCTGTGGGC‑CAGGTATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTATTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGa < 1:857690/150‑1 (MQ=255) gcgcCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGACTGCTGATGGCCCCCAGCAGCCCATGTTGGGCGCCAGCGGTTAGTACTACCTGGTTCCAGCGacc > 2:847294/1‑148 (MQ=255) cGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGCTCTTCACTGGTAGCGCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCa < 2:1485101/150‑1 (MQ=255) gCCCGGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAgg < 2:1286807/150‑1 (MQ=255) cccAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCg > 1:1854063/1‑117 (MQ=255) cccAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCg < 2:1854063/117‑1 (MQ=255) aGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGca < 1:1270229/148‑1 (MQ=255) aGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGca > 2:1270229/1‑148 (MQ=255) ggCTGTGGGT‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGTGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGcagcc > 2:2279259/1‑150 (MQ=255) gCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtacta < 1:969245/122‑1 (MQ=255) tgtgGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGcagccagc > 1:488474/1‑150 (MQ=255) c‑cAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CCGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGc < 1:372130/130‑1 (MQ=255) c‑cAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGc > 2:372130/1‑130 (MQ=255) c‑cAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTa < 1:462810/150‑1 (MQ=255) cAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGgc > 2:291670/1‑96 (MQ=255) cAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGgc < 1:291670/96‑1 (MQ=255) aGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATc > 2:1782208/1‑150 (MQ=255) atgatgCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTc < 1:198252/150‑1 (MQ=255) gatgCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGGTGGCCATCAGCAGcctgt > 1:1412666/1‑77 (MQ=38) gatgCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGGTGGCCATCAGCAGcctgt < 2:1412666/80‑4 (MQ=38) ccGGGTAGCAGAGCGACTCGCACCGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACct < 1:2035029/102‑1 (MQ=255) ccGGGTAGCAGAGCGACTCGCACAGCACCACCTAGTGTGTATTCGAGGAAGTTAAAGA‑AGTCACCATCGTCGCAGTGTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCgg > 1:1212231/1‑150 (MQ=255) gTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGc < 1:64495/107‑1 (MQ=255) gTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGc > 1:1512362/1‑118 (MQ=255) gTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGc < 2:1512362/118‑1 (MQ=255) agagCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCttgtttgt < 2:488474/150‑1 (MQ=255) gagCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtacta < 1:901730/89‑1 (MQ=255) gagCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGtacta > 2:901730/1‑89 (MQ=255) cTCGCACAGTACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCa > 2:1434710/1‑123 (MQ=255) cTCGCACAGTACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCa < 1:1434710/123‑1 (MQ=255) cTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACgt < 1:2083458/150‑1 (MQ=255) tCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATc > 1:407406/1‑101 (MQ=255) tCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATc < 2:407406/101‑1 (MQ=255) tCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACgtg > 1:1920439/1‑150 (MQ=255) cGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGCAGGACACCGTTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACgtgt < 1:2279259/150‑1 (MQ=255) gCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGtgtg > 2:638021/1‑150 (MQ=255) acaGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGac < 1:1197795/150‑1 (MQ=255) caccacCTCGTCAGTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGaccacc < 2:1797814/150‑1 (MQ=255) ccacATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGaccacc > 2:755254/1‑148 (MQ=255) ccacATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCct > 2:2283704/1‑150 (MQ=255) ccacATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGATGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGaccacc < 1:755254/148‑1 (MQ=255) cacaTCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCctc > 1:2328855/1‑150 (MQ=255) acaTCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGaccac < 1:427112/145‑1 (MQ=255) acaTCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGaccac > 2:427112/1‑145 (MQ=255) acaTCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCctct < 1:1932890/150‑1 (MQ=255) aTCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCct < 2:375091/146‑1 (MQ=255) gTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTcac < 2:1212231/150‑1 (MQ=255) tCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTAt < 2:2033432/101‑1 (MQ=255) tCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTAt > 1:2033432/1‑101 (MQ=255) aCTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCa > 2:2098634/1‑56 (MQ=255) aCTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCa < 1:2098634/56‑1 (MQ=255) ctTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTc > 1:2010705/1‑150 (MQ=255) ttCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAgg < 2:1075374/100‑1 (MQ=255) ttCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAgg > 1:1075374/1‑100 (MQ=255) ttCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCg > 1:1568267/1‑150 (MQ=255) tCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTTCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGa < 2:1135442/150‑1 (MQ=255) tCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGa < 1:604460/150‑1 (MQ=255) caacatgggCTGCTGGTGGCCATCAGCAGCCTATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCg > 1:1818403/8‑150 (MQ=255) a‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGa < 2:615752/147‑1 (MQ=255) a‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGa > 1:615752/1‑147 (MQ=255) cAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTAc > 1:1684524/1‑150 (MQ=255) gctgctGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTAcc > 1:140243/1‑148 (MQ=255) ctgctgGTGGCCATCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc > 1:313033/1‑150 (MQ=255) ctgctgGTGGCCATCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc > 2:1605001/1‑150 (MQ=255) ctgctgATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc < 2:2010705/150‑1 (MQ=255) ctgctgATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGc < 2:1920439/150‑1 (MQ=255) gctgATTTCCACCAGCAGCCCATGTGTGTCTGCACCGCTCAGTACTACCTGCTGCCAGCGAGCATCAGGCATCCAGCGCTGTATCCAGGTCTCACCGGCTTATTTCGTGCACGTGTAAGCACCCTCCGTCATCTAGTCGAGTACCTTccc < 2:93725/150‑1 (MQ=255) gATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGa < 1:1234034/115‑1 (MQ=255) gATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGa > 2:1234034/1‑115 (MQ=255) gATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCaa < 1:1782208/150‑1 (MQ=255) gATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGGCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCaa < 2:634296/150‑1 (MQ=255) | GGCCGCGCGCAATGCCTCCGGGATGAGCCCGTGTTCGTCCATGGCGACGCCGCGCAGGCGCCGGCCCAGGCTGTGGGC‑CAGGGATATGATGCCCGGGTAGCAGAGCGACTCGCACAGCACCACATCGTCACTCTTCGA‑CAGGCTGCTGATGGCCACCAGCAGCCCATGTTGGGCGCCAGCGGTCAGTACTACCTGCTGCCAGCGAGCATCAGGCAGCCAGCGCTGTATCCAGGTCGCACCGGCTTGTTTGTGGGACGTGTGACCACCCTCTGTCACATAGTCGAGTACCTGCCCCAAG > NC_002947/572373‑572670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |