| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 726,945 | A→C | 8.4% | intergenic (‑189/+78) | PP_0620 ← / ← PP_0621 | GntR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 726,945 | 0 | A | C | 8.4% | 249.8 / 15.8 | 97 | intergenic (‑189/+78) | PP_0620/PP_0621 | GntR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (42/46); new base C (5/3); total (47/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.41e-01 | |||||||||||
GAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCCTGCTGCAGC > NC_002947/726798‑727092 | gAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATaca > 1:2284149/1‑150 (MQ=255) gCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCgtggt < 2:1802596/150‑1 (MQ=255) gCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCgtggt > 1:1553122/1‑150 (MQ=255) agagtgtacatttgtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCAcc < 2:1455824‑M1/35‑1 (MQ=255) agagtgtacatttgtactccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCAcc > 1:1455824‑M1/110‑144 (MQ=255) ccGGACGGGTAAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGc < 1:1400123/150‑1 (MQ=255) cGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGcc > 1:971280/1‑150 (MQ=255) gACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGATATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTg < 2:449163/150‑1 (MQ=255) acagttggactccaaacgagcggcgtggcggttcttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGcctgatt > 2:402371‑M1/103‑147 (MQ=255) gTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGTTGCCATACACCgtggt > 2:1947200/1‑140 (MQ=255) gTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGTTGCCATACACCgtggt < 1:1947200/140‑1 (MQ=255) gTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTcg > 2:1384180/1‑150 (MQ=255) cAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTcgcg < 1:1810875/150‑1 (MQ=255) aaTGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg < 1:2094455/150‑1 (MQ=255) aaTGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg < 1:2054250/150‑1 (MQ=255) aaTGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg < 1:349535/150‑1 (MQ=255) tGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTTGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCCTACATGTTGGTGCCTGCTTCGCGGGCAAg > 1:902048‑M2/1‑149 (MQ=255) ggCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgc > 1:1384180‑M2/1‑148 (MQ=255) ccaaacgaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccctctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGggcatgc > 1:1253263‑M1/92‑147 (MQ=255) cGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgccc > 2:231544‑M2/1‑146 (MQ=255) aggggggcaGGGCGGGTAAATGGGGTGAAAGGGTCGGGGAGGGATATGTGGCACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgccc > 1:2087241‑M2/2‑146 (MQ=255) ggggggAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgcccgc < 1:1842838‑M2/150‑7 (MQ=255) gaccgtcgtggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccccctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTc < 2:234861‑M1/65‑1 (MQ=255) gggAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgcccgctcc > 2:971280‑M2/1‑141 (MQ=255) gAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCggg > 1:57709/1‑136 (MQ=255) gAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCggg < 2:57709/136‑1 (MQ=255) ggggTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCTATACACCGTGGTGCCTGCTTCGCGGGCAAGATCGCTATcaca < 2:1258115/150‑1 (MQ=38) tggcggtccttcttgcgcaagtaacaggtaccacacagtccgcaagcacgccgcactccccctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGGCATGCCCGCTCCCACAgag > 1:234861‑M1/78‑149 (MQ=255) ggcGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACCAAATTGCAGATAAAAACTGTGGGAGCGGGCGCGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGAt < 2:404937/148‑1 (MQ=255) gTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCgtg < 2:427291/115‑1 (MQ=255) gTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCgtg > 1:427291/1‑115 (MQ=255) gTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGAt > 2:1366515/1‑150 (MQ=255) gTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCAGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGAGCAAGCCGGCTCCCACAGaa > 2:2196977/1‑149 (MQ=255) tCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGTCGTAGTCATACACCATGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGAtt > 1:1310384/1‑150 (MQ=38) aaaTGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGa > 2:1828852/1‑150 (MQ=255) aaTGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCGCCGAGCACCGGCGAAGCCGGTGCCATACACCGAGGTGCCTGCTTCGCGGGCAAGCGCGCTCCCACAGATTTCgca > 1:154273/1‑148 (MQ=37) aTGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAAt < 2:1553122/150‑1 (MQ=255) aTGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAAt > 2:2273955/1‑150 (MQ=255) tGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAAtt < 1:769475/150‑1 (MQ=255) ggggtgAAAGGGTCGGGGAGGTATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTg < 2:1977792/147‑1 (MQ=255) gtgtGAAAGGGTCGGGGAGGGATATGTGGAACACGAATTTGCAGATAAAAACTGTGGGGGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACAGTGGTGCCTGCTTCGCGGGCAAGCCAGCTCACACAGATTTCGAATTgg > 1:1888307/1‑150 (MQ=37) tgggAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGt < 2:1894022/147‑1 (MQ=255) aaaGGGTCGGGGGGGGATATGTGGAACACGAACTTGCAGATAAAAACTGTGGGGACGGGCGTGCCCGAGAACAACGGCGAAGCCGGTGCCATACACCTTGGTGCCTGCTTCGCGGGCAAGCGCGCTCCCACAGATTTCGAATCAGtttga > 2:2279455/1‑148 (MQ=255) aaaGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCa < 1:2273955/150‑1 (MQ=255) gggggTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAg > 2:1788358/3‑150 (MQ=255) aaGGGTCGGGTAGTGATATGTTGAACACGAAATTGCAGATAAAAACTGTGTGAGCCGGCGTTCCCGCTAACACCAGCGAATCCGTTGCTATTCACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAg < 2:780362/150‑1 (MQ=37) aagtaacaggtaccacacagtccgcaagcacgccgcgcttccctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGgcatg > 1:449511‑M1/59‑114 (MQ=255) aagtaacaggtaccacacagtccgcaagcacgccgcgcttccctgtgggagcgggcacGCCCGCGAACACCGGCGAAGCCGGTGCCATCCACCGTGTCGCCTGATTCGCGGgcatg < 2:449511‑M1/58‑3 (MQ=255) gTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGAtt < 2:2284149/150‑1 (MQ=255) gTCGGGGAGGGATATGTGGAACAAGACATTGCAGATAAAAACTGGGGGGGCGGGCGTGCCCTCGAACACCGGCGAAGCCGGTGCCATACACCATGGTGCCTGCCTCGCGCGCAAGCCCGCTCCCACAGATTTCTAATTCGTTTCAGGAtt < 2:1310384/150‑1 (MQ=37) gagggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg > 2:1944938/1‑104 (MQ=255) gagggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg < 1:1944938/104‑1 (MQ=255) gagggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGa < 1:1828346/142‑1 (MQ=255) gagggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGa > 2:1828346/1‑142 (MQ=255) agggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGa < 1:1828852/150‑1 (MQ=255) gggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGAc < 1:2102639/150‑1 (MQ=255) ggaTATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACa > 2:1416592/1‑150 (MQ=255) gtgGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGCGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGaa > 2:1875624/1‑121 (MQ=255) gtgGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGCGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGaa < 1:1875624/121‑1 (MQ=255) tgGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCgtg < 2:2029595/148‑1 (MQ=255) tgGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCgtg > 1:2029595/1‑148 (MQ=255) ggAACACGAAATTGAAGATAGCAACAGTGGTTGTGGTTGTGCCCGCGATCACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTc > 1:1221171/1‑150 (MQ=37) aaCACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg > 1:2087041/1‑91 (MQ=255) aaCACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCgg < 2:2087041/91‑1 (MQ=255) aaCACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAg > 1:1868888/1‑127 (MQ=255) aaCACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAg < 2:1868888/127‑1 (MQ=255) acacGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGc < 2:289617/150‑1 (MQ=255) acGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCt > 1:767572/1‑150 (MQ=255) gAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtg < 1:1366515/150‑1 (MQ=255) gAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtg > 1:617571/1‑150 (MQ=255) gAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtg < 2:1187196/150‑1 (MQ=255) gAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtg < 2:1187300/150‑1 (MQ=255) aaTTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtggt < 2:617571/150‑1 (MQ=255) aTAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAggg < 1:1707964/150‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGa < 1:1816473/91‑1 (MQ=255) tgGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGa > 2:1816473/1‑91 (MQ=255) tgGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGGGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCGCTGCTGCa > 1:1117834/1‑150 (MQ=255) gggAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAg < 1:1477631/150‑1 (MQ=255) gggAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAg < 1:656188/150‑1 (MQ=255) agtgggAGTGCCCGCTATCACCTGCGTAGCCGGTGCGATACCCCTTGGTTCCTGCTTCGCGGGCAAGCCCTCTCCCACAGAGTCCGAATTGCTTTCAGGAGTGAACAGACATCGTGTTCAGCCTTGGTCGCCAGGGCCCTGCTGCAAGTg < 2:1888307/147‑1 (MQ=255) cGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgcccgctcccacagtttttatctgcaatttcgtgttccacatatccctccccgaccctttcacaccatttacgacccctccccccc < 1:1034984‑M2/150‑87 (MQ=255) gggCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtggtg < 2:389073/126‑1 (MQ=255) gggCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTtggtg > 1:389073/1‑126 (MQ=255) gTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgcccgctcccacagtttttatctgcaatttcgtgttccacatatccctccccgaccctttcacaccatttacgacccctcccccccgccag > 2:1034984‑M2/1‑59 (MQ=255) gTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCctgc < 2:1979883/135‑1 (MQ=255) gTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCctgc > 1:1979883/1‑135 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGc > 2:958604/1‑150 (MQ=255) gAACACCGGCGAAGCCGGTGCCATACCCCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATa < 1:2196977/150‑1 (MQ=255) ccGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAgcccgctcccacagtttttatctgcaatttcgtgttccacatatccctccccgaccctttcacaccatttacgacccctcccccccgccagcattgacccgtcc < 1:1659619‑M2/150‑105 (MQ=255) cGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTc > 2:1893352/1‑150 (MQ=255) gCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCAt > 2:1091288/1‑150 (MQ=255) gAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTg > 2:1498408/1‑150 (MQ=255) gTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCctgct > 1:1902995/1‑150 (MQ=255) gTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCctgct < 2:2331674/150‑1 (MQ=255) gTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCct > 1:641977/1‑147 (MQ=255) gTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCct < 2:641977/147‑1 (MQ=255) tGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGTCCTGCTGCAGGTGGGCCTGGCTGCAATACCACACATTGCCgtgcgg < 2:1842838/150‑3 (MQ=255) aTACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCCTGCTGCAgc > 1:497143/1‑150 (MQ=255) | GAATTTTGCCCGGACGGGTCAATGCTGGCGGGGGGGAGGGGTCGTAAATGGTGTGAAAGGGTCGGGGAGGGATATGTGGAACACGAAATTGCAGATAAAAACTGTGGGAGCGGGCGTGCCCGCGAACACCGGCGAAGCCGGTGCCATACACCGTGGTGCCTGCTTCGCGGGCAAGCCCGCTCCCACAGATTTCGAATTGGTTTCAGGATTGAACAGACATCGTGTTCAGCCTTGGTGGCCAGGGCCCTGCTGCAGGTGGGCCTGGCTGCAATACCACTCATTGCCCTGCTGCAGC > NC_002947/726798‑727092 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |