| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 868,055 | A→C | 7.0% | intergenic (+150/+27) | PP_0750 → / ← mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 868,055 | 0 | A | C | 7.0% | 311.4 / 14.4 | 114 | intergenic (+150/+27) | PP_0750/mqo‑I | hypothetical protein/malate:quinone oxidoreductase |
| Reads supporting (aligned to +/- strand): ref base A (53/53); new base C (3/5); total (56/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.97e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTTCTCGCGAGCCGGGAAGA > NC_002947/867909‑868203 | gTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACTCCCCGAggg < 2:766028/150‑1 (MQ=255) ccAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGt < 1:20660/150‑1 (MQ=255) gTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttt < 2:1738965/150‑1 (MQ=255) tGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGttttt < 1:1769513/150‑1 (MQ=255) tGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGttttt > 1:1383711/1‑150 (MQ=255) cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCg > 1:1531894/1‑150 (MQ=255) cGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCg > 2:1755289/1‑150 (MQ=255) ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt < 2:1957413/150‑1 (MQ=255) ggCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGt < 2:1628017/150‑1 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGGCAGGCACAAAAAACTCCCCCAGAGGCGTTTTTGCGtt > 2:504155/1‑150 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGtt > 1:2192744/1‑150 (MQ=255) gCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGAGCCAGGAACAAAAAACGTGCCGAGCAGCGTCTTTGCGtt > 2:503219/1‑150 (MQ=255) tctTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAGCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGtttt < 1:392469/141‑1 (MQ=255) ttCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGa < 2:1266466/150‑1 (MQ=255) gcgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCtt > 1:2079183/1‑150 (MQ=255) cgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAcc < 2:1341817/144‑1 (MQ=255) cgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAcc > 1:1341817/1‑144 (MQ=255) cgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAcc > 1:1339375/1‑144 (MQ=255) cgcgcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGAcc < 2:1339375/144‑1 (MQ=255) gcgcCCTCCCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTaa < 2:719535/150‑1 (MQ=255) gcCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑Gc < 2:35284/144‑1 (MQ=255) cGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTa < 2:1554918/150‑1 (MQ=255) cGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTa > 1:1279709/1‑150 (MQ=255) gCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAg > 1:526731/1‑150 (MQ=255) cTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGt < 1:893483/150‑1 (MQ=255) ccACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGCGCGGGCATGCCCGCGTAGAGGGCGGTACAGGCTGATCTAGCGCCAGGCTCTAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGCCCT‑GCTTACGCGTAGTgtt > 2:263802/1‑148 (MQ=255) cacaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGATCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCtt < 1:503219/150‑1 (MQ=255) acaGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTg < 2:636823/150‑1 (MQ=255) tCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTaa > 2:1696759/1‑136 (MQ=255) tCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAg < 1:1696759/137‑1 (MQ=255) gccgcACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg < 1:1845995/100‑1 (MQ=255) gccgcACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAggg > 2:1845995/1‑100 (MQ=255) ccgcACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt > 1:2127067/1‑107 (MQ=255) ccgcACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCTCGGGGCGtttttt < 2:2127067/108‑2 (MQ=255) ccgcACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGgctg < 2:1553255/150‑1 (MQ=255) cgcACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGgctgc > 2:1969273/1‑150 (MQ=255) cggCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct < 1:24549/148‑1 (MQ=255) cTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGctctct < 1:504155/150‑1 (MQ=255) ccGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCATTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAgg < 1:2079954/150‑1 (MQ=255) cGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑Gc > 2:1986464/1‑103 (MQ=255) cGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑Gc < 1:1986464/103‑1 (MQ=255) aaCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAACAACGCCCCGAgg < 2:33205/77‑1 (MQ=255) aaCCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAgg > 1:33205/1‑77 (MQ=255) cTGTGGGAGCGTGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCcgcg < 2:550146/150‑1 (MQ=255) cGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCg < 2:1465485/150‑1 (MQ=255) gggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCgg < 2:2192744/150‑1 (MQ=255) ggCATGCCCTGGAAGAGGGCGGTACAGGCTCATCAAGCGCCAGGCACAAAAAGCGGCCAGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCCTAGTGCTTGGCCGCCGGGCTGCTCTCGGCTAGGTCCAGTGCCGCGTGGTCAGCGGc < 2:220141/150‑1 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTg < 1:930920/103‑1 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTg < 2:305077/103‑1 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTg > 1:305077/1‑103 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTg > 2:930920/1‑103 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCGAGGTCCAGGGCAGCGTCCTTATCGGc > 2:131472/1‑150 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGc > 2:811218/1‑150 (MQ=255) ggCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGATTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGc > 2:561415/1‑150 (MQ=255) gCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCa > 2:75702/1‑150 (MQ=255) ccGCGAAGAGGGCGGTACAGGCTGCCAGAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATc < 1:1755289/150‑1 (MQ=255) ccGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATc > 2:1118742/1‑150 (MQ=255) gAAGAGGGCGATCCAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGCGGAGACTAACATC‑TCGGAGCTCGCGCTTAAGCGTAGTGGGTACCCCCCGGGCTGCTATTCGTCATTTTCAGGGTCGCGTCGTTATCGGCACTGATCTtgt < 1:1113999/150‑1 (MQ=255) aaGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCTGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgtg < 1:441412/150‑1 (MQ=255) aaGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgtg < 1:457500/150‑1 (MQ=255) aaGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgtg < 2:162962/150‑1 (MQ=255) gagGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGt < 1:131472/150‑1 (MQ=255) gTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCa > 2:559641/1‑104 (MQ=255) gTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAgcgc > 2:1206961/1‑150 (MQ=255) tACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCgca < 2:1131661/150‑1 (MQ=255) ggCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCAt < 1:75702/150‑1 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAggg < 2:174710/107‑1 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAggg > 1:174710/1‑107 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtc > 2:325318/1‑114 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtc < 1:325318/114‑1 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtc < 1:325368/114‑1 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGcgtc > 2:325368/1‑114 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATc > 2:137453/1‑150 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATc > 1:608643/1‑150 (MQ=255) gCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATc > 2:221504/1‑150 (MQ=255) tGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgtg > 2:941280/1‑133 (MQ=255) tGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTtgtg < 1:941280/133‑1 (MQ=255) tGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCgg > 1:1177211/1‑150 (MQ=255) aTCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGtt < 2:526731/150‑1 (MQ=255) aaGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTGGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGcc > 1:1893713/1‑150 (MQ=255) gcgcCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCgg > 1:624944/1‑113 (MQ=255) gcgcCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAg > 1:667017/1‑150 (MQ=255) cgcCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAgg < 1:1645821/150‑1 (MQ=255) gcCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAggg > 2:280446/1‑150 (MQ=255) gcCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAggg > 2:445576/1‑150 (MQ=255) gcCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAggg < 1:1969273/150‑1 (MQ=255) ccAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGt < 2:1893713/150‑1 (MQ=255) gCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGtcttc < 1:237485/150‑1 (MQ=255) gCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGtcttc > 1:1930541/1‑150 (MQ=255) acaAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGtcttccc < 1:1593770/150‑3 (MQ=255) acaAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTtctc < 1:1237909/150‑1 (MQ=255) acaAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTtctc > 1:1657223/1‑150 (MQ=255) acaAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTtctc > 1:1657086/1‑150 (MQ=255) caAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTTCTcg > 1:445981/1‑150 (MQ=255) aaaaaCGCCCCTCGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTTCTcgcg > 2:2169514/1‑150 (MQ=255) aaaaaCGCCCCTCGGGGCGTTTTTGCGTTTCACACAG‑CCTTAATCGAATTTCTTGGCCGCAGGGCTGCGCTCTGCCAGCTCACGCGCCCGGTCGGGATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCACGGTCTTCTcgcg > 1:1695116/1‑150 (MQ=255) aaaaaCGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAt < 1:2212761/98‑1 (MQ=255) aaaaaCGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTAt > 2:2212761/1‑98 (MQ=255) ccGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTTCTCGCGAGCCGGGaa < 1:280446/150‑1 (MQ=255) gAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTTCTCGCGAGCCGGGAAGa > 2:2164484/1‑150 (MQ=255) | GTAGCCAGTGCCGGCCTCTTCGCGGGCGCGCCCGCTCCCACAGGAGTCGCGCCGCACCTGCGGGCATTACCGAACCTGTGGGAGCGGGCATGCCCGCGAAGAGGGCGGTACAGGCTGATCAAGCGCCAGGCACAAAAAACGCCCCGAGGGGCGTTTTTGCGTTTCAGACCG‑GCTTAAGCGTAGTGCTTGGCCGCCGGGCTGCTCTCTGCCAGGTCCAGGGCCGCGTCGTTATCGGCACTGATCTTGTGGTACAGCGCAGCATCGGTTGCCAGGGTCTTCTCGCGAGCCGGGAAGA > NC_002947/867909‑868203 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |