| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 900,539 | T→G | 6.7% | intergenic (+28/+17) | PP_0784 → / ← cysZ | hypothetical protein/sulfate transport protein CysZ |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 900,539 | 0 | T | G | 6.7% | 260.2 / 8.5 | 95 | intergenic (+28/+17) | PP_0784/cysZ | hypothetical protein/sulfate transport protein CysZ |
| Reads supporting (aligned to +/- strand): ref base T (49/39); new base G (2/5); total (51/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
AGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTC > NC_002947/900391‑900685 | aGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTg < 1:2012542/150‑1 (MQ=255) ccTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTTCa < 1:666815/150‑1 (MQ=255) ccTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCa < 2:368709/150‑1 (MQ=255) ccTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAAAAAAAAAAAAAAAGGGGCTGCCCTGCa < 2:999128/150‑1 (MQ=255) ttGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGTAACATCTAATACTCCTTTCTCAGATTGACACCCTCGAACCCTACAGTTTCTCCGAATTCTAAAAAGCAATCCGAAAAAAGGGGCTGCACTGCAGc > 2:351278/1‑150 (MQ=255) ttCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGC‑‑CCCttt < 2:563093/150‑3 (MQ=255) ggcggGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCACCGAATATTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGC‑‑CCCtttttg < 2:1492477/150‑6 (MQ=255) gcggGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGC‑‑CCCtttttgc < 1:389880/150‑7 (MQ=255) ggTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTc < 1:369305/150‑1 (MQ=255) ggTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTc < 2:593865/150‑1 (MQ=255) aaGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTcc < 1:1876078/143‑1 (MQ=255) aaGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTcc > 2:1876078/1‑143 (MQ=255) gCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTcc < 1:706000/141‑1 (MQ=255) gCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTcc > 2:706000/1‑141 (MQ=255) cTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGC‑‑CCCttt > 1:118037/1‑130 (MQ=255) cTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCAGGGCAGC‑‑CCCttt < 2:118037/132‑3 (MQ=255) gCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGc > 2:826372/1‑150 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCtt < 1:1377051/133‑1 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCtt > 2:1377051/1‑133 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCAc > 1:2014945/1‑150 (MQ=255) tAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCATCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCAc > 1:414454/1‑150 (MQ=255) aaCCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCAcc > 2:355697/1‑150 (MQ=255) cTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAg > 1:1019640/1‑150 (MQ=255) gagaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGaac > 2:2211904/1‑150 (MQ=255) gaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGc‑‑cc < 2:159268/114‑1 (MQ=255) gaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGc‑‑cc > 1:159268/1‑114 (MQ=255) gaAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCACCCATCTTGTCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGaacaa < 2:1230879/150‑1 (MQ=255) gTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGaacaacaga > 1:1667049/1‑147 (MQ=255) gTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTa > 2:1376753/1‑150 (MQ=255) gTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTATAAAATTCAATCCGCAACCAGGCGC‑‑ACCGGCAGCGAGCCTCTCCCCTTCAGCTCGGCTCCCGCACCCAGAACAACGTa > 1:1104180/1‑150 (MQ=255) gTTAAGGCAGTGGAACATCTAATACTGCTTTATCAGATTGCCACCCTCGAACCCTACAGTTTCTGCGAGTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGCACAACGTa > 1:942042/1‑150 (MQ=255) attAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTa > 1:1518468/2‑150 (MQ=255) ttAGGGCAGTGGAACATTTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAACCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAg < 2:1684213/150‑1 (MQ=255) aGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGccc > 2:1108651/1‑150 (MQ=255) gCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCg > 1:544319/1‑150 (MQ=255) ggAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCAc > 1:53887/1‑150 (MQ=255) gAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACt > 1:378275/1‑150 (MQ=255) tCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTgccgc > 2:543548/1‑150 (MQ=255) aTACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGc < 1:1411745/150‑1 (MQ=255) aCTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTTTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcat < 1:2260886/150‑1 (MQ=255) aCTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAgctcc < 1:689328/104‑1 (MQ=255) aCTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAgctcc > 2:689328/1‑104 (MQ=255) aCTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcat > 1:687783/1‑150 (MQ=255) cTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatc > 2:618145/1‑150 (MQ=255) tGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatca < 1:351278/150‑1 (MQ=255) tGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCCAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatca > 1:636767/1‑150 (MQ=255) cTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCatcatc > 1:3878/1‑150 (MQ=255) cTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCatcatc < 2:378275/150‑1 (MQ=255) ttCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAg < 1:355697/150‑1 (MQ=255) tctcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGc < 1:826372/150‑1 (MQ=255) tcAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCAc > 1:1400766/1‑150 (MQ=255) cAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACg < 2:544319/150‑1 (MQ=255) gATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGc < 2:1961197/73‑1 (MQ=255) gATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGc > 1:1961197/1‑73 (MQ=255) gCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCCAAAAGGGGCTGCCCGGGTGC‑‑GGGTGGCTCCGTTGGCGTCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACg < 2:263254/150‑1 (MQ=255) ccACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGc > 1:1867096/1‑150 (MQ=255) ccACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGc > 2:13916/1‑150 (MQ=255) cACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGccgccg < 2:2040854/128‑1 (MQ=255) cACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGccgccg > 1:2040854/1‑128 (MQ=255) cACCCTCGAACCCTACAGGTTCTCCGACTTCTAAAAAGCACTCCGCAAAGAGGGGCTGCCCTGCAGC‑‑CCCTCGCACCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCACCATCAGCACGTTCACGcc > 2:844951/1‑150 (MQ=255) cACCCTCGAACCCTACAGCCTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCGCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGcc > 2:972568/1‑150 (MQ=255) ccccTCGAACGCTAGAGTTTCTCCGACTTCTAAAAACCAATCCCCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTCCAGCCCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCt < 2:2127163/149‑1 (MQ=255) ccTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcat < 2:2200414/129‑1 (MQ=255) ccTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcat > 1:2200414/1‑129 (MQ=255) cTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGa > 1:726376/1‑150 (MQ=255) tCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatc > 2:238041/1‑128 (MQ=255) tCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGcatc < 1:238041/128‑1 (MQ=255) tCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGaa > 1:891230/1‑150 (MQ=255) gAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAatc < 1:618145/150‑1 (MQ=255) ccTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAAtcatca > 1:1125923/1‑150 (MQ=255) tttCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCag > 2:1824189/1‑150 (MQ=255) tttCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCag < 1:1824189/150‑1 (MQ=255) tttCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCag > 1:1508291/1‑150 (MQ=255) ctgcGACGTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggta < 2:53887/147‑1 (MQ=255) tcCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggtag < 1:2211904/150‑1 (MQ=255) cGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTGCGCTCCCGCACCCAGAACAACGTAGCCGCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGACaggtaggt > 2:185129/1‑150 (MQ=255) cGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggtaggt < 2:1104180/150‑1 (MQ=255) ttCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggtag > 1:763657/1‑144 (MQ=255) ttCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCaggtag < 2:763657/144‑1 (MQ=255) tCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATgc < 2:891230/150‑1 (MQ=255) tAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACGCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATgccg > 1:2189982/1‑150 (MQ=255) tAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATgccg > 2:2190022/1‑150 (MQ=255) tAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATgccg > 2:833326/1‑150 (MQ=255) aGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCGCCCGCACCCAGAGCAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCGCGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCaaa < 1:972568/150‑1 (MQ=255) tCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCa < 1:1376753/150‑1 (MQ=255) gCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATTAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGc > 1:944639/1‑150 (MQ=255) aaaaGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGctc > 2:1164819/1‑149 (MQ=255) aaaaGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGctc < 1:1164819/149‑1 (MQ=255) aaGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGc < 2:3878/150‑1 (MQ=255) gCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTCCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGAt > 2:586434/1‑123 (MQ=255) gCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTCCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGAt < 1:586434/123‑1 (MQ=255) gCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAACCCCAGGCTCTGCCAGCGCtt < 2:687783/150‑1 (MQ=255) cccTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTc > 1:736692/1‑150 (MQ=255) cccTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTc > 1:940636/1‑150 (MQ=255) cccTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTc < 1:543548/150‑1 (MQ=255) | AGCCTTGGCGTTCGGCGGGTCAAGCGACCTTGCTAACCTCGAGAAGGTTAAGGCAGTGGAACATCTAATACTGCTTTCTCAGATTGCCACCCTCGAACCCTACAGTTTCTCCGACTTCTAAAAAGCAATCCGCAAAAAGGGGCTGCCCTGCAGC‑‑CCCTCGCTCCTTCAGCTCCGCTCCCGCACCCAGAACAACGTAGCCCCGGCCACTGCCGCCGGCATCATCAGCACGTTCACGCCTGGAATCATCAGCGCCAGGTAGGTGATGCCGCCAAAGCCCAGGCTCTGCCAGCGCTTC > NC_002947/900391‑900685 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |