| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 919,675 | G→C | 8.6% | intergenic (‑143/+48) | PP_5458 ← / ← PP_0800 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 919,675 | 0 | G | C | 8.6% | 237.7 / 10.8 | 78 | intergenic (‑143/+48) | PP_5458/PP_0800 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (34/37); new base C (4/3); total (38/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGGT > NC_002947/919535‑919824 | gAAACTACCTTCTCGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGccc > 1:1807577/1‑150 (MQ=255) aaaCTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGcccc < 2:2021838/150‑1 (MQ=255) cttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAg < 2:1013922/150‑1 (MQ=255) ttcttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAgg < 2:1040463/150‑1 (MQ=255) cttGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGgc < 1:2245411/150‑1 (MQ=255) ggTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTg > 2:1167733/1‑150 (MQ=255) gCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGcac > 1:1866195/1‑150 (MQ=255) aaGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAg > 1:2217379/1‑150 (MQ=255) gAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCt > 1:934287/1‑150 (MQ=255) aGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt > 2:1911010/1‑150 (MQ=255) gACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg > 2:1706591/1‑150 (MQ=255) gACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg < 1:1738621/150‑1 (MQ=255) gACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGGGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTgg > 2:1498496/1‑150 (MQ=255) cAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCa < 2:530092/150‑1 (MQ=255) cAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCa < 2:1345271/150‑1 (MQ=255) aGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCa > 2:1068289/1‑149 (MQ=255) aGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCa < 1:1068289/149‑1 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc > 1:1495748/1‑150 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc > 2:11682/1‑150 (MQ=255) gggTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGc < 1:516641/150‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGc > 2:1491215/1‑95 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGc < 1:1491215/95‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGcac > 1:181012/1‑116 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGcac < 2:181012/116‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt < 2:1269321/129‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCtt > 1:1269321/1‑129 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaga > 1:1664419/1‑148 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaaa < 2:2228448/150‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaaa > 1:1449879/1‑150 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATaaa < 1:99784/150‑1 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGCGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAggg > 2:2086447/1‑107 (MQ=255) cTTTCAGTGCACTCGAAACAGAGCGAAGCGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAggg < 1:2086447/107‑1 (MQ=255) tttCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAg > 2:1760419/1‑150 (MQ=255) tttCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGGTGCGCAAACGGTAACGAACATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGACGCCGCCTTAGCAGGCTAGAAACCGATAAAg > 2:1382278/1‑150 (MQ=255) tCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGc < 1:1706591/150‑1 (MQ=255) cAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCg < 1:578055/150‑1 (MQ=255) cAGTGAACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCg < 2:2310895/150‑1 (MQ=255) aGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAg > 2:329609/1‑100 (MQ=255) aGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAg < 1:329609/100‑1 (MQ=255) aGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGt < 1:11682/150‑1 (MQ=255) aGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGt < 1:154453/95‑1 (MQ=255) aGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGCCGAAAGCCCCGt > 2:154453/1‑95 (MQ=255) aCTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAggg > 2:1249411/1‑110 (MQ=255) aCTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAgga < 1:1249411/110‑2 (MQ=255) aaaCAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg > 1:1936269/1‑150 (MQ=255) cAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGt > 1:387490/1‑150 (MQ=255) aaGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATgg < 2:1936269/150‑1 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACGGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt > 2:932450/1‑150 (MQ=255) tGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGtt > 2:2141145/1‑150 (MQ=255) gATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTtgtg < 2:2057249/150‑1 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgc < 2:1449879/150‑1 (MQ=255) aTAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTgc < 2:2217379/150‑1 (MQ=255) aGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGcgccgc < 2:1439577/91‑1 (MQ=255) aGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGcgccgc > 1:1439577/1‑91 (MQ=255) gCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCaa > 2:642429/1‑150 (MQ=255) cACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCaaa > 2:765619/1‑150 (MQ=255) tGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGt < 2:1807577/150‑1 (MQ=255) gcgcAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACGGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTg < 1:932450/150‑1 (MQ=255) cgcAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGc < 1:1167733/150‑1 (MQ=255) cAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCt < 1:1911010/150‑1 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAc < 1:579242/90‑1 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAAc > 2:579242/1‑90 (MQ=255) gTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGc > 2:592519/1‑150 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc > 2:1911739/1‑150 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc < 1:592519/150‑1 (MQ=255) gATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGcc < 1:1911739/150‑1 (MQ=255) tCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGt < 2:1866195/150‑1 (MQ=255) tCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGt > 2:1157150/1‑150 (MQ=255) gAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCt > 1:744032/1‑42 (MQ=255) gAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCt < 2:744032/42‑1 (MQ=255) caacGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATcc < 2:2144015/150‑1 (MQ=255) ggggCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGca > 1:2096565/1‑150 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg < 2:220522/88‑1 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCgg > 1:220522/1‑88 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATggg < 1:559699/99‑1 (MQ=255) ggggCTTTCGCCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATggg > 2:559699/1‑99 (MQ=255) gCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACAt < 2:1495748/150‑1 (MQ=255) cTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATg > 2:41226/1‑150 (MQ=255) gCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGGt > 2:930215/1‑150 (MQ=255) | GAAACTACCTTCTTGCGGTGCAAGTGCTAATGAGGACAGGGGTAAAGTTAGTCCTTTCAGTGCACTCGAAACAGAGCGAAGTGCGATAAGCACTGTTGCGCAAAAGGTAACGATCATTGGGTGGAACAACGGGGCTTTCGGCGAAAGCCCCGTGCTAGGGCGCCTGCACAGGGCGCCGCCTTGGCAGGCTAGAAACCGATAAAGGCGTAATAAACCGGGGTTTCATGGGTTGTGCGCAAACCCAGTGCCTGCAAGCTTGCCGTCAGCGCTTCATCCTGCACATGCAAGGT > NC_002947/919535‑919824 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |