| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 997,736 | A→G | 5.3% | intergenic (‑138/+94) | PP_0860 ← / ← PP_0861 | sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 997,736 | 0 | A | G | 5.3% | 341.9 / 5.5 | 113 | intergenic (‑138/+94) | PP_0860/PP_0861 | sulfite reductase flavoprotein subunit/outer membrane ferric siderophore receptor |
| Reads supporting (aligned to +/- strand): ref base A (60/45); new base G (3/3); total (65/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
TCTTCTTCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCG > NC_002947/997589‑997884 | tcttctTCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑aaa < 1:584777/150‑1 (MQ=255) ttcttcACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGc < 2:291496/150‑1 (MQ=255) ttcACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGCCTGTGCCGGCCCTTTCGCGGCT‑‑GAAGCCGc > 2:2195199/1‑150 (MQ=255) caccacGTTTCTCACCTTCAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGCGGGCTGCTTTTCGTGTTGTCTGTTCGGGCCCCTTCGCGGCG‑‑AAcgccgcca > 1:1070171/1‑148 (MQ=255) cacGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTg > 2:466678/1‑150 (MQ=255) acGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGc > 2:1519894/1‑150 (MQ=255) gTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCAc > 1:839806/1‑150 (MQ=255) tttCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGCATGAACGGGGCCGGGAGGGATGCTTTTGGTGTTGTTTGTGCGGGCCTCGTCGCGGCT‑‑AAAGCCGCTCCTGcccc > 1:1904256/1‑150 (MQ=255) aCCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAAc > 2:1322954/1‑150 (MQ=255) ccTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACg > 1:1037516/1‑150 (MQ=255) cTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑CAAGCCGCTCCTGCACCGGCAACGc > 1:2195185/1‑150 (MQ=255) ttGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCa < 1:1732928/150‑1 (MQ=255) aGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGa < 2:1268376/150‑1 (MQ=255) gctgcCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCgg < 1:2148301/150‑1 (MQ=255) ccGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTc < 1:466678/150‑1 (MQ=255) cgcgACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCa > 1:1137157/1‑150 (MQ=255) gcgACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAg > 2:1690723/1‑150 (MQ=255) aCCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCcg > 2:2319363/1‑150 (MQ=255) cccGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCcgc < 2:2212289/150‑1 (MQ=255) ccGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCcgcg > 1:2306227/1‑150 (MQ=255) cgcgGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCCCCTGCCCCGGCAACGCAGGAGCGGCTTCAGCCGCGaaa < 2:2021058/150‑1 (MQ=255) cggcgTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑GAAGCCGCTCCTGCGTTGCCGGTGCAGGAGCGGCTTTAGCCGCGaagag < 1:2017046/150‑4 (MQ=21) gTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCg < 1:1951162/150‑1 (MQ=255) gTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCCGGGCGGGCCTCTTCGCGGCTCCCGAACCGCGCCT‑‑ACCGGCATGGCAGGAGCGGCTTCAGCCGCGAAAGGGCCg > 1:2270617/1‑150 (MQ=255) ttATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGcaca > 1:2250742/1‑150 (MQ=255) ccTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGgcgc > 2:826187/1‑150 (MQ=255) ttGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑GAAGCCGCTc > 1:612714/1‑95 (MQ=255) ttGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑GAAGCCGCTc < 2:612714/95‑1 (MQ=255) tACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCt > 2:2269431/1‑150 (MQ=255) acacAAAAGCCCCGCGCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCtt < 2:2195185/150‑1 (MQ=255) cacaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTc < 1:2214865/150‑1 (MQ=255) acaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTcc > 2:1538854/1‑149 (MQ=255) acaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCa < 2:1957538/150‑1 (MQ=255) acaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCa > 1:1709177/1‑150 (MQ=255) acaAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCa > 1:743229/1‑150 (MQ=255) caAAAGCCCCGCTCACGGGACTGACCGGCCACGGCGGGTGTCCGGTGCGGGTTTTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa < 1:2269805/150‑1 (MQ=255) caAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa < 1:826187/150‑1 (MQ=255) caAAAGCCCCGATCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa > 2:336746/1‑150 (MQ=255) gCCCCGCTCACGGGAATGAACGGGTCCGGGAGGGCTTCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAActgct < 1:1248448/150‑5 (MQ=255) cccccGCTCACGGGAATGATCCGGTCTTGGGTGGTTTCTTTTCGTTTTTTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaccgatc < 1:1248421/149‑7 (MQ=255) ccccGCTCACGGGAATGAACGGGGCCGGGGGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATc < 1:719572/150‑1 (MQ=255) ccccGCGCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATc < 1:926319/150‑1 (MQ=255) ccGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCTGGCACAGGCGCAGCCCTTCAACAGATcaa > 2:817387/1‑150 (MQ=255) ccGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaa < 1:2023026/150‑1 (MQ=255) ccGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTGGGCTTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCAGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaa > 1:1354294/1‑150 (MQ=255) atCAGGGGCATAAACGAGGCCAGGAGGGCCGCCGTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaaccc > 2:273557/2‑150 (MQ=255) tCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaaccca > 1:379660/1‑150 (MQ=255) aCGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaac > 2:588931/1‑150 (MQ=255) aCGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaac < 2:85645/150‑1 (MQ=255) cGGGAGTGAACGGGGCCGGGAGGCCTGCTTGTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaacc > 2:1256958/1‑150 (MQ=255) cGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATcaacccaacc < 2:1924850/150‑1 (MQ=255) gggAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCaacccaaccc > 1:623260/1‑150 (MQ=255) gAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCaa > 1:1779691/1‑81 (MQ=255) aTGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCTGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGAc < 1:817387/150‑1 (MQ=255) cgCCGGACGGGTTGCTCATCGTGTGCTCTGCTCGGGCCTCTTCGCGGCG‑‑AAAGCCGCTCTGTTACCGGCAACGCAGGAGCGGCTTCAGCCGCGACAGGACCGGCACAGGCGCAGCCATTCAACAGACCAACCCCACCCTGACATCAGAAg > 2:26112/2‑150 (MQ=255) gCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGt < 2:2112564/150‑1 (MQ=255) gCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACACCAGAAGt < 2:623260/150‑1 (MQ=255) ccGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTg > 2:2080379/1‑150 (MQ=255) ggAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCAc > 2:618409/1‑150 (MQ=255) gggCTGTTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCt > 2:358167/1‑150 (MQ=255) ggCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCa > 1:1739159/1‑112 (MQ=255) ggCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCa < 2:1739159/112‑1 (MQ=255) ctgctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtggt > 1:421102/1‑150 (MQ=255) ctgctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACAGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtggt > 2:147532/1‑150 (MQ=255) tgctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGa > 2:607084/1‑129 (MQ=255) tgctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGa < 1:607084/129‑1 (MQ=255) tgctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCtggtg > 1:1620362/1‑150 (MQ=255) ctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTggtggt > 1:1611201/1‑150 (MQ=255) ctTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACACAACCCTGACATCAGAAGTGCACGCTggtggt < 2:743229/150‑1 (MQ=255) ttttCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCgg < 2:2217682/67‑1 (MQ=255) ttttCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCgg > 1:2217682/1‑67 (MQ=255) ttttCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTc < 1:1538854/150‑1 (MQ=255) cGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACa < 2:403839/150‑1 (MQ=255) tgttgtCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGt > 1:894040/1‑150 (MQ=255) gttgtCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa > 1:1101295/1‑100 (MQ=255) gttgtCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCaa < 2:1101295/100‑1 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCg > 2:185102/1‑58 (MQ=255) ttgtCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCg < 1:185102/58‑1 (MQ=255) tCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGaaa > 2:1730241/1‑70 (MQ=255) tCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGaaa < 1:1730241/70‑1 (MQ=255) tCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGt > 2:369078/1‑150 (MQ=255) ccTGTGCCGGCCCTTTCGCGGCT‑‑GAAGCCGCTCCTGCACCGGCAACGCAGGAGc > 2:1225384/2‑54 (MQ=1) ccTGTGCCGGCCCTTTCGCGGCT‑‑GAAGCCGCTCCTGCACCGGCAACGCAGGAGc < 1:1225384/53‑1 (MQ=1) gggCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCg > 2:843351/1‑150 (MQ=255) gggCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCg > 1:1225790/1‑150 (MQ=255) gccctttCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgc > 1:1383758/6‑150 (MQ=255) gCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgc > 1:1482557/1‑150 (MQ=255) ctctTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgccg < 1:1391863/150‑1 (MQ=255) ctctTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgccg > 2:1571918/1‑150 (MQ=255) tctTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgccgc > 1:74686/1‑150 (MQ=255) tctTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGgccgc < 2:2270617/150‑1 (MQ=255) ttCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTc < 2:922244/46‑1 (MQ=255) ttCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTc > 1:922244/1‑46 (MQ=255) gcgGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCt > 1:2260068/1‑75 (MQ=255) gcgGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCt < 2:2260068/75‑1 (MQ=255) gcgGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGt < 1:2080379/150‑1 (MQ=255) cT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGc > 1:663198/1‑150 (MQ=255) t‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGaa < 1:2071111/101‑1 (MQ=255) t‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGaa > 2:2071111/1‑101 (MQ=255) t‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCg > 2:767497/1‑150 (MQ=255) | TCTTCTTCACCACGTTTCTCACCTTGAGTTGCTGCCGCGACCCGCGCGGCGTGCATTATGCCTTGATACACAAAAGCCCCGCTCACGGGAATGAACGGGGCCGGGAGGGCTGCTTTTCGTGTTGTCTGTGCGGGCCTCTTCGCGGCT‑‑AAAGCCGCTCCTGCACCGGCAACGCAGGAGCGGCTTCAGCCGCGAAAGGGCCGGCACAGGCGCAGCCCTTCAACAGATCAACCCAACCCTGACATCAGAAGTGCACGCTGGTGGTCAACAGTGCCGTGCGCCCGGCCGCCTGGTTGGCG > NC_002947/997589‑997884 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |