| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 155,546 | A→C | 5.6% | intergenic (‑251/+32) | yjbB ← / ← ygdQ | Na+/Pi‑cotransporter/transport protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 155,546 | 0 | A | C | 5.6% | 306.9 / 7.2 | 106 | intergenic (‑251/+32) | yjbB/ygdQ | Na+/Pi‑cotransporter/transport protein |
| Reads supporting (aligned to +/- strand): ref base A (47/53); new base C (4/2); total (51/55) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.25e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01 | |||||||||||
Only 100 of 107 total aligned reads displayed.
CTGTCGCCAGCTTCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCGAGAAGG > NC_002947/155398‑155690 | gTCGCCAGCTTCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAgg < 1:1444781/150‑1 (MQ=255) gCCAGCTTCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGcc > 2:1105575/1‑150 (MQ=255) atctcTTCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGCTGGCGCAGGCTTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGccc < 2:652285/146‑1 (MQ=255) cAGCTTCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCt < 2:1850274/150‑1 (MQ=255) ttCGCATGGCAGTCATTTATTTGAAACTTGAT‑TGGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCtagat > 1:652285/1‑146 (MQ=255) ttCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgtt < 1:304865/150‑1 (MQ=255) cATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGccc > 1:1418538/1‑141 (MQ=255) cATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGccc < 2:1418538/141‑1 (MQ=255) cATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAAAGGCCGAGTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc < 1:122392/150‑1 (MQ=255) cATGGCAGTCATTTATTTGAAAC‑AGATCTTAAAACGAATGACTGCCTGTGGGGGCTGCTTCGCGTGCAAGCCATCACAGTGACAACGCGCAGT‑AAAAAAAAAAAAAAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc < 2:2232746/150‑1 (MQ=255) cATGGCAGTAATTCTTTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc < 2:134505/150‑1 (MQ=255) ggCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgctgc < 1:695517/150‑1 (MQ=255) gCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCa > 1:2147137/1‑150 (MQ=255) tCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGcc > 1:972124/1‑132 (MQ=255) atttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAGGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCt > 1:1548633/1‑150 (MQ=255) tttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc > 1:1428699/1‑139 (MQ=255) tttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGtgc < 2:1428699/139‑1 (MQ=255) tttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCtt < 1:1818956/150‑1 (MQ=255) tttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCtt > 1:2285376/1‑150 (MQ=255) tttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCtt > 2:1967214/1‑150 (MQ=255) tttatttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCtt < 2:625163/150‑1 (MQ=255) ttatctGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGAAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGGACTTCCTTg < 2:788383/150‑1 (MQ=255) ttatctGAAAC‑AGATCTTGAAAAGAATGACTCCCCGTGGGGGCTGCCTCGCGGGCAAGCCACCACAGTGACAACGCCCAGG‑AAAAAACGCAAAGAAAAAAGGCATTAAAAAGGGCCCGGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTg < 1:1647665/150‑1 (MQ=255) atttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTtgtg < 2:935979/135‑1 (MQ=255) atttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTtgtg > 1:935979/1‑135 (MQ=255) atttGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGc < 2:696613/150‑1 (MQ=255) gAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgtt > 2:1857336/1‑128 (MQ=255) gAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCttgtt < 1:1857336/128‑1 (MQ=255) gAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTa < 2:567364/150‑1 (MQ=255) aaaC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTAt > 1:1876979/1‑150 (MQ=255) aaaC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTAt < 2:2147137/150‑1 (MQ=255) aaaC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTAt < 2:1541005/150‑1 (MQ=255) aaC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTAtt > 2:1729076/1‑150 (MQ=255) aGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGAc < 2:1876979/150‑1 (MQ=255) aTCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGAccc < 1:226146/150‑1 (MQ=255) aaaCGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATg > 2:2271231/1‑150 (MQ=255) aaCGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGGAAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATg > 2:718098/1‑150 (MQ=255) gAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCt > 1:217879/1‑150 (MQ=255) cTGCCCGTGGGGGCTGCTACGCGGGAAAGCCACCACAGTAAAAAAAAAAAAA‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCa < 2:1042400/150‑1 (MQ=255) tGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTgg < 1:1462882/121‑1 (MQ=255) tGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTgg > 2:1462882/1‑121 (MQ=255) ccGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCAGCGGGTGGGCCTTATTGACCCGGAATGTCCTTGCGCAGttt > 1:122366/1‑150 (MQ=255) ccGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGttt < 1:464579/150‑1 (MQ=255) ccGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGtt < 2:2069598/149‑1 (MQ=255) ccGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGtt > 1:2069598/1‑149 (MQ=255) gggCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGAc > 1:127787/1‑122 (MQ=255) gggCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGAc < 2:127787/122‑1 (MQ=255) gctTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTg < 2:828480/106‑1 (MQ=255) gctTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCAt > 2:63787/1‑150 (MQ=255) ttCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAAAGTCCTTGCGGGGATTCATCGGtcccaca > 2:1885005/1‑144 (MQ=255) gggCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCtt < 1:1885005/150‑1 (MQ=255) ggCAAGCCACCACAGTGACAACGCGCAGGAAAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCtt < 1:718098/150‑1 (MQ=255) gCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGc < 1:63787/150‑1 (MQ=255) cAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGcc < 2:2285376/150‑1 (MQ=255) aaGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGcc > 2:1015831/1‑73 (MQ=39) aaGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTTCGCAGGGcc < 1:1015831/73‑1 (MQ=255) aaGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCa > 2:947861/1‑150 (MQ=255) gCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTg < 1:2108332/145‑1 (MQ=255) gCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTg > 2:2108332/1‑145 (MQ=255) gCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATc > 2:1730087/1‑150 (MQ=255) gCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCATTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTTCCATc > 1:130993/1‑150 (MQ=255) cacaGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGc < 1:1729076/150‑1 (MQ=255) acaGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCg < 2:1489369/150‑1 (MQ=255) tGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGcc > 2:774735/1‑150 (MQ=255) tGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGcc > 2:1625134/1‑150 (MQ=255) aaCGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATgg > 1:269851/1‑150 (MQ=255) aaCGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATgg > 2:2048731/1‑150 (MQ=255) cgcgCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCg > 2:1880971/1‑150 (MQ=255) gcgcAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCgg < 2:1733649/150‑1 (MQ=255) gcAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCg > 1:1934903/1‑137 (MQ=255) gcAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTg < 1:890541/150‑1 (MQ=255) cGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTTCGGGCCATGGCGGTGCGCATGCgggt < 2:217879/150‑3 (MQ=255) gCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATg > 2:1445922/1‑150 (MQ=255) aGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGa > 2:2160406/1‑150 (MQ=255) gAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGAt < 1:947861/150‑1 (MQ=255) gAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGAt > 1:611066/1‑150 (MQ=255) aaaaaaGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATg > 2:1142279/1‑150 (MQ=255) aaaaaGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATgg < 1:2048731/150‑1 (MQ=255) aaaaGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGc < 1:1967214/150‑1 (MQ=255) aGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGa < 1:65/97‑1 (MQ=255) aGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGa > 2:65/1‑97 (MQ=255) aGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTc < 2:2178901/150‑1 (MQ=255) aTTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTg < 2:1890679/47‑1 (MQ=255) aTTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTg > 1:1890679/1‑47 (MQ=255) aTTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCAcc < 1:1445922/150‑1 (MQ=255) aacaaGGGCCCTTCGCAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGcc > 1:1555308/4‑150 (MQ=255) aaaaaGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTgc < 1:350373/121‑1 (MQ=255) aaaaaGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTgc > 2:350373/1‑121 (MQ=255) aGGGCCCGGCGAAGGGCCCTTGTTGTTCTGCTCTTCCTTGGCCTTATTGACCCGGAATGTCCTTGTGCAGTTTCACTGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGCTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCg < 2:1125176/150‑1 (MQ=255) gggCCCTTCGCAGGGCCTTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCga > 2:1191025/1‑150 (MQ=255) gggCCCTTCGCAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGCTCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCg > 1:707123/1‑123 (MQ=255) gggCCCTTCGCAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCg < 2:707123/123‑1 (MQ=255) gggCCCTGCGAAGGGCCCTTGTTGTGCTGCCTTTTAATGGGAGCAGCGACCCGCAATTTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCga < 1:2271231/150‑1 (MQ=255) cccTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCGTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCGAGaa > 2:2018910/1‑150 (MQ=255) cccTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTCATGGCTTCCACCGCCAGCGAGaa < 1:1880971/150‑1 (MQ=255) ccTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCAc > 1:2096168/1‑71 (MQ=255) ccTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCAc < 2:2096168/71‑1 (MQ=255) cTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCGAGAAgg > 2:632332/1‑150 (MQ=255) tGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCg < 2:1413413/137‑1 (MQ=255) tGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCg > 1:1413413/1‑137 (MQ=255) | CTGTCGCCAGCTTCGCATGGCAGTCATTTATTTGAAAC‑AGATCTTGAAACGAATGACTGCCCGTGGGGGCTGCTTCGCGGGCAAGCCACCACAGTGACAACGCGCAGG‑AAAAAACGCACAGAAAAAAGGCATTAAAAAGGGCCCTGCGAAGGGCCCTTGTTGTGCTGCACTTCCTTGGCCTTATTGACCCGGAATGTCCTTGCGCAGTTTCACCGGTTCATGATCCTTGCCATCCTTGCGGGCCATGGCGGTGCGCATGCGGATGTTGATGGCTTCCACCGCCAGCGAGAAGG > NC_002947/155398‑155690 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |