Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,237,663 A→G 7.3% L151P (CTG→CCG)  PP_1078 ← ABC transporter ATP‑binding protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,237,6630AG 7.3% 222.7 / 7.0 83L151P (CTG→CCG) PP_1078ABC transporter ATP‑binding protein
Reads supporting (aligned to +/- strand):  ref base A (37/38);  new base G (3/3);  total (42/41)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.13e-01

AGGCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAA  >  NC_002947/1237514‑1237807
                                                                                                                                                     |                                                                                                                                                
aGGCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCa                                                                                                                                                  >  1:167065/1‑150 (MQ=255)
     tcttcCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGcc                                                                                                                                             <  2:878454/150‑1 (MQ=255)
       ttgcTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCg                                                                                                                                           >  1:2332918/4‑150 (MQ=255)
        tcCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCgg                                                                                                                                          <  1:570132/150‑1 (MQ=255)
        tcCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCgg                                                                                                                                          <  1:1790530/150‑1 (MQ=255)
          cTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCCCGGGCGCTGGCGCCCGAGc                                                                                                                                        <  1:2300900/150‑1 (MQ=255)
             gTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGTAGCAGTTGCGGCTCGGGGGCCAGGGGCCGGGCCAg                                                                                                                                     >  1:977023/1‑150 (MQ=255)
             gTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAg                                                                                                                                     <  2:751933/150‑1 (MQ=255)
                  gggTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGa                                                                                                                                <  1:1525876/150‑1 (MQ=255)
                     tGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGacac                                                                                                                             >  1:1662635/1‑150 (MQ=255)
                     tGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGacac                                                                                                                             <  2:185189/150‑1 (MQ=255)
                        ccAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCACCAGCGCCCGGGCCAGGGCGACACGtt                                                                                                                          >  2:1707753/1‑150 (MQ=255)
                         cAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGTCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTtg                                                                                                                         <  1:754203/150‑1 (MQ=255)
                         cAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCTAGGGCGACACGTtg                                                                                                                         >  1:904333/1‑150 (MQ=255)
                             aTGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTtgctgc                                                                                                                     <  2:1010452/150‑1 (MQ=255)
                                gcgcTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTgg                                                                                                                  >  2:992241/1‑150 (MQ=255)
                                gcgcTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTgg                                                                                                                  <  1:992241/150‑1 (MQ=255)
                                 cgcTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgc                                                                                                                 <  2:2072927/150‑1 (MQ=255)
                                  gcTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgcc                                                                                                                >  2:130343/1‑150 (MQ=255)
                                  gcTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgcc                                                                                                                >  2:869621/1‑150 (MQ=255)
                                        aCCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAggg                                                                                                                                   <  2:1851670/125‑1 (MQ=255)
                                        aCCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAggg                                                                                                                                   >  1:1851670/1‑125 (MQ=255)
                                        aCCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGa                                                                                                          <  2:167065/150‑1 (MQ=255)
                                          cgcgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgcc                                                                                                                <  2:1594683/142‑1 (MQ=255)
                                          cgcgGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgcc                                                                                                                >  1:1594683/1‑142 (MQ=255)
                                                 tttGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGGCGGACAGCTCATg                                                                                                 >  1:1982401/1‑150 (MQ=255)
                                                  ttGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGc                                                                                                <  1:130343/150‑1 (MQ=255)
                                                  ttGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGc                                                                                                >  1:706925/1‑150 (MQ=255)
                                                    gagaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCGACGGCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCgg                                                                                              <  2:822113/150‑1 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCa                                                                                                                                                  >  2:480378/1‑97 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCa                                                                                                                                                  <  1:480378/97‑1 (MQ=255)
                                                     agaATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCggg                                                                                             >  1:708275/1‑150 (MQ=255)
                                                         tGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAc                                                                                         <  2:2332918/150‑1 (MQ=255)
                                                         tGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAc                                                                                         >  1:1396481/1‑150 (MQ=255)
                                                            cgcgAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAcgcc                                                                                      >  2:1754508/1‑150 (MQ=255)
                                                             gcgAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAcgccc                                                                                     <  2:1507350/150‑1 (MQ=255)
                                                               gAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGGCGAGGTTGGAGAATGGCTCGGCAAGCAGCAGCAGTTGCGGCTCGGGCGCCCGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAcgcccgc                                                                                   >  1:494181/1‑150 (MQ=255)
                                                                   cTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAg                                                                               >  1:1732089/1‑150 (MQ=255)
                                                                      aTGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGccc                                                                            >  2:1865484/1‑150 (MQ=255)
                                                                           tCAGGCGCCGGCGCAGCTCCACGTCGAGAATGGAGAATGGGTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGa                                                                       >  1:2200526/1‑150 (MQ=255)
                                                                             aGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGt                                                                     <  1:1503297/150‑1 (MQ=255)
                                                                              ggCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGtt                                                                    <  2:706925/150‑1 (MQ=255)
                                                                                 gcCGGCGCAGCGCCCCGTCGGGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCGGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGa                                                                 <  2:494181/150‑1 (MQ=255)
                                                                                       gcAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCt                                                           >  2:795409/1‑150 (MQ=255)
                                                                                           cTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAg                                                       <  1:159478/150‑1 (MQ=255)
                                                                                            tCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGTACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGc                                                      >  2:744732/1‑150 (MQ=255)
                                                                                              cACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCGGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCAt                                                                                                  >  1:1670941/1‑104 (MQ=255)
                                                                                              cACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCGGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCAt                                                                                                  <  2:1670941/104‑1 (MQ=255)
                                                                                               aCGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGc                                                                                                      <  2:350391/99‑1 (MQ=255)
                                                                                               aCGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGc                                                                                                      >  1:350391/1‑99 (MQ=255)
                                                                                                cGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCACCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCAtct                                                  <  1:1707753/150‑1 (MQ=255)
                                                                                                    gAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCTAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATTCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTc                                              <  2:904333/150‑1 (MQ=255)
                                                                                                    gAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTc                                              >  2:969763/1‑150 (MQ=255)
                                                                                                    gAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTc                                              >  2:1500473/1‑150 (MQ=255)
                                                                                                    gAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTc                                              <  1:650091/150‑1 (MQ=255)
                                                                                                         tGGAGAATGGCTCGTCACCCAGCAGCAGTTGCGACTCGGGCTCCCGCGCCCGCGGCAGGGCCACACGTTGCTGCTCGCCGCCGGCCACCTCATGCGGGTACCGCCCGCCCAGCCCGCCGGGGTTGACCAGCTCCAGCATCTCTTCGATgg                                         >  2:804603/1‑149 (MQ=255)
                                                                                                            agaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAc                                                                                         >  2:802474/1‑99 (MQ=255)
                                                                                                            agaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAAc                                                                                         <  1:802474/99‑1 (MQ=255)
                                                                                                            agaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGa                                         >  1:980854/1‑147 (MQ=255)
                                                                                                            agaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGa                                         <  2:980854/147‑1 (MQ=255)
                                                                                                             gaATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGGACCCGCATCTTCTCTATGACGgc                                     >  2:724711/1‑150 (MQ=255)
                                                                                                              aaTGGCTCGTCAAGCAGCAGCAGTAGCGGGTCGGGCGCCAGCGCCCGGGACAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCGCGCCCAGCCCGCCGAGATTGACCAGCTCCAACATCTCTTCGAGGACCgcc                                    >  1:654258/1‑150 (MQ=255)
                                                                                                                tGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGgccgc                                  >  1:881394/1‑150 (MQ=255)
                                                                                                                  gCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGTGCCAGCGCCCGGGCCAGGGTTACACGTTGCTGCTCGCCGCCGCACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCt                                <  2:1289514/150‑1 (MQ=255)
                                                                                                                   cTCGTCAAGCAGCAGCATTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGTGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACG‑CCACCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCCgg                              <  2:977023/150‑1 (MQ=255)
                                                                                                                    tCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGATAGCTCATGCGGGTAACGCCCGCCCATCCTGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTgg                              >  1:524695/1‑150 (MQ=255)
                                                                                                                    tCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTgg                              >  1:702576/1‑150 (MQ=255)
                                                                                                                         aaGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTgg                         <  1:2264778/150‑1 (MQ=255)
                                                                                                                         aaGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTgg                         >  1:925688/1‑150 (MQ=255)
                                                                                                                         aaGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTgg                         <  2:1396481/150‑1 (MQ=255)
                                                                                                                          agcagcagcAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgcc                                                                                                                <  1:1793167/62‑1 (MQ=255)
                                                                                                                          agcagcagcAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGgcc                                                                                                                >  2:1793167/1‑62 (MQ=255)
                                                                                                                           gcagcagcaGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGgt                       <  2:708275/150‑1 (MQ=255)
                                                                                                                           gcagcagcaGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGgt                       <  1:795409/150‑1 (MQ=255)
                                                                                                                           gcagcagcaGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGgt                       >  2:1428737/1‑150 (MQ=255)
                                                                                                                               cagcagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTgg                         <  2:498883/144‑1 (MQ=255)
                                                                                                                               cagcagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTgg                         >  1:498883/1‑144 (MQ=255)
                                                                                                                                 gcagTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGCGTGTTTgg                 <  1:969763/150‑1 (MQ=255)
                                                                                                                                 gcagTTGCGACTCGGGCGACAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTgg                 >  2:513872/1‑150 (MQ=255)
                                                                                                                                    gTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGa              >  1:810071/1‑150 (MQ=255)
                                                                                                                                      cctggcccGGGCGCTGGCGCCCGAGCCGGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGtt                    >  2:1130668/8‑142 (MQ=255)
                                                                                                                                      cctggcccGGGCGCTGGCGCCCGAGCCGGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGtt                    <  1:1130668/135‑1 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGc                >  1:457385/1‑145 (MQ=255)
                                                                                                                                       gCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGc                <  2:457385/145‑1 (MQ=255)
                                                                                                                                            ccGGGCGCTGGCGCCCAGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAg      >  2:1392767/2‑150 (MQ=255)
                                                                                                                                                gcgcCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCaa  <  1:604853/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                
AGGCTTCTTCCTGGTCATGGGTGACCAGAATGGCGCTGGTACCGCGGCTTTTGAGAATGTCGCGAACCTCATGGCTCAGGCGCCGGCGCAGCTCCACGTCGAGGTTGGAGAATGGCTCGTCAAGCAGCAGCAGTTGCGGCTCGGGCGCCAGCGCCCGGGCCAGGGCGACACGTTGCTGCTGGCCGCCGGACAGCTCATGCGGGTAACGCCCGCCCAGCCCGCCGAGTTTGACCAGCTCCAGCATCTCTTCGATGACGGCCGCCTGGCGTGGGTGTTTGGCGATACCAAAGGCAA  >  NC_002947/1237514‑1237807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑