| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,364,666 | A→T | 7.1% | intergenic (+30/+119) | dctA‑I → / ← PP_1189 | C4‑dicarboxylate transport protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,364,666 | 0 | A | T | 7.1% | 284.0 / 12.8 | 100 | intergenic (+30/+119) | dctA‑I/PP_1189 | C4‑dicarboxylate transport protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (45/47); new base T (4/3); total (49/51) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.15e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.08e-01 | |||||||||||
Only 100 of 103 total aligned reads displayed.
AGTGGGTCAAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCGGAT > NC_002947/1364518‑1364814 | aGTGGGTCAAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAg < 1:94165/150‑1 (MQ=255) tGGGTCAAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGt > 1:939394/1‑150 (MQ=255) ggTCAAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCg < 1:2312665/150‑1 (MQ=255) gTCAAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGc > 1:621657/1‑150 (MQ=255) cAAGGAAATGGACAACGACCAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAATGTCGCCt < 2:968966/150‑1 (MQ=255) aaGGAAATGGACACCGACAAGCTGACCTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACCGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCtt > 2:144771/1‑150 (MQ=255) aGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGc < 1:349506/146‑1 (MQ=255) aGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGc > 2:349506/1‑146 (MQ=255) aGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCttt > 2:1974346/1‑150 (MQ=255) aGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCttt < 1:389759/150‑1 (MQ=255) aGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCttt > 2:389759/1‑150 (MQ=255) gAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCttttt > 1:845382/1‑150 (MQ=255) gAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCttttt > 1:1374310/1‑150 (MQ=255) aaaTGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTc < 2:315002/150‑1 (MQ=255) aTGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt < 1:87995/150‑1 (MQ=255) aTGGACAACGACAAGCTGGCTTCGGAACTGAACTCCGGTGGTGCGCCGCTGATAGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTAGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTGGCCTTTTTCgg > 1:800472/1‑149 (MQ=255) aCAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTa < 1:67950/150‑1 (MQ=255) aaCGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCTGCCAGACGGACGACCTGGGCGTGTCTGAAGGCCCGGCTGGTTGAGAGCTAGTTGAAATGAGAAAGGCTACCAAAGGTCGGCTTTTTCGTGTTAgc > 1:180143/1‑150 (MQ=255) aaCGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCACGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAgc > 1:1500227/1‑150 (MQ=255) cGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAgcgc < 2:577483/150‑1 (MQ=255) cGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAgcgc < 2:1374310/150‑1 (MQ=255) aCAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCgg < 2:401037/150‑1 (MQ=255) aaGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt < 2:2008560/138‑1 (MQ=255) aaGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt > 1:2008560/1‑138 (MQ=255) gCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTtgt < 2:2325233/150‑1 (MQ=255) ttCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCtttc < 2:54722/126‑2 (MQ=255) ttCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCtttc > 1:54722/1‑125 (MQ=255) cGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTg‑g < 2:621657/150‑1 (MQ=255) gAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGc < 2:1789639/150‑1 (MQ=255) gAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGc < 1:744540/150‑1 (MQ=255) aaCTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGcc > 1:115777/1‑150 (MQ=255) aaCTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGcc < 1:789290/150‑1 (MQ=255) aCTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAg > 1:338762/1‑110 (MQ=255) aCTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAg < 2:338762/110‑1 (MQ=255) tcgACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTg < 2:1917588/148‑1 (MQ=255) gACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCt > 2:287582/1‑150 (MQ=255) aCTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGACGACCAAAGGTAGCCTCTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTc > 2:1533495/1‑150 (MQ=255) tCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCaa > 1:2043405/1‑150 (MQ=255) cGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAAtt > 1:966347/1‑150 (MQ=255) cGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAAtt > 1:2001853/1‑150 (MQ=255) cGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAACGAAAAAGGCGACCTTTGGTCGCCtttctcat > 1:1533998/1‑110 (MQ=37) cGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAACGAAAAAGGCGACCTTTGGTCGCCtttctcat < 2:1533998/115‑6 (MQ=37) gtgCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCtttctcat < 1:410853/110‑6 (MQ=38) gtgCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCTTTGGTCGCCtttctcat > 2:410853/1‑105 (MQ=39) gcgcCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTaaaa < 2:2060347/150‑1 (MQ=255) cgcTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTg > 2:2027815/1‑150 (MQ=255) aTCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAATGCTGGcgcg > 1:1658663/1‑150 (MQ=255) aTCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGcgcg > 1:784659/1‑150 (MQ=255) aTCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGcgcg > 2:1810648/1‑150 (MQ=255) tCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGa < 2:115777/150‑1 (MQ=255) aTACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCGTTGATGG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTG > 1:122810‑M1/1‑150 (MQ=255) aCCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGa < 2:1393398/150‑1 (MQ=255) ccgcccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTG > 1:881823‑M1/1‑146 (MQ=255) ccgcccgACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTG < 2:881823‑M1/146‑1 (MQ=255) gacggacgACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGa > 1:1996668/1‑150 (MQ=255) cggacgACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTACCAGCTGGCGCGATTGGACTGTGGGAGc < 1:554612/150‑1 (MQ=255) gacgacCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCgg > 1:1529636/1‑150 (MQ=255) gacgacCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCgg < 2:845382/150‑1 (MQ=255) cgacCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGc < 1:287582/150‑1 (MQ=255) cTGGGCGTGGCTGAAGGCGCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTCTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGc < 2:730712/150‑1 (MQ=255) tGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGcc < 2:547144/150‑1 (MQ=255) ggCGTGGCTGAAGGCCAGGCTCGTTAAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCcg > 2:483169/1‑150 (MQ=255) gCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTaaaa < 2:375725/113‑1 (MQ=255) gCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTaaaa > 1:375725/1‑113 (MQ=255) gTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGCACGGAGTCTATAGCACGCTCTCTTCTTCCTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCAAGCCcgctc < 1:2027815/150‑3 (MQ=255) tGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGGCCAAAGGACGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACg > 1:541215/1‑150 (MQ=255) tGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACg > 1:1284612/1‑150 (MQ=255) gAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACgg < 2:1658663/150‑1 (MQ=255) aaGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGAGACCAAAGGTCGCCTTTTTCGTGTTa > 1:1168611/1‑66 (MQ=255) aaGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGAGACCAAAGGTCGCCTTTTTCGTGTTa < 2:1168611/66‑1 (MQ=255) aGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGgctgagggccacgggcttcgcccgtgttcgcgg > 1:802903‑M1/1‑117 (MQ=255) cccGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAACGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAATAGCTGGCGCGATGGCACTGTGGGAGCGGGCTTGCCGGCGAACTCGGGCGac < 2:800472/150‑2 (MQ=38) ccGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt > 2:951834/1‑57 (MQ=255) ccGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCgt < 1:951834/57‑1 (MQ=255) ccGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGAc > 2:706200/1‑69 (MQ=255) ccGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGAc < 1:706200/69‑1 (MQ=255) cTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCg > 1:445456/1‑150 (MQ=255) cGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGATTC‑AGCGGGTGGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGGGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTg < 1:144771/150‑1 (MQ=25) gCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAg > 2:1920721/1‑150 (MQ=255) cTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGgctgagggccacgggcttcgcccgtgttcgcgggcaagcccgctcccacagt < 2:802903‑M1/150‑53 (MQ=255) ttGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAg < 2:445456/150‑1 (MQ=255) tGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGgctgagggccacgggcttcgcccgtgttcgcgggcaagcccgctcccacagtccaat < 1:1810648‑M1/150‑58 (MQ=255) gAAATGAGAAAGGCGACGAAAGGTCGCCTTTTTAGTGTTAGCGCGGACCCTTGTGTG‑TGCTTTGCTCAATTTCTAAAAGCTGGCGCGATTGGgctgagagccacgggcttcgcccgtgttagcgggcaagcccgctcccacagtccaatc < 2:180143‑M1/150‑59 (MQ=255) aaaTGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCCTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTAc < 2:1500227/150‑1 (MQ=255) acgaaaaaGGCGACCTTTGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCa > 2:272605/6‑150 (MQ=37) tGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCATTGAACA‑GGCCGAGCTCACTTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCACCCCACTACCAc > 2:572907/1‑150 (MQ=25) agaAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACtt > 1:1412604/1‑150 (MQ=255) gaAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTc < 1:1974346/150‑1 (MQ=255) aaaGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTcc > 2:156231/1‑150 (MQ=255) aaaGGCGACCAAAGCTCCCCTCTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTCCTAAAAGCTGGCGCGATTGGACTGTGGGAGCCGGCTTGCCCCCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTcc < 2:2288457/150‑1 (MQ=38) aaGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCa < 2:314445/150‑1 (MQ=255) aGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCaa > 2:1070694/1‑150 (MQ=255) aGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCaa < 2:784659/150‑1 (MQ=255) gACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAacac > 1:1221354/1‑107 (MQ=255) gACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAacac < 2:1221354/107‑1 (MQ=255) cAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCTTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCgg > 1:2018954/1‑150 (MQ=255) cAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCgg > 1:317482/1‑150 (MQ=255) aaGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑TGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTc > 2:795792/1‑138 (MQ=255) aaGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑TGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTc < 1:795792/138‑1 (MQ=255) aaGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCGGAt < 1:156231/150‑1 (MQ=255) | AGTGGGTCAAGGAAATGGACAACGACAAGCTGGCTTCGGAACTGGACTCCGGTGGTGCGCCGCTGATCGATACCCGCCCGACGGACGACCTGGGCGTGGCTGAAGGCCCGGCTCGTTGAGAGCTGGTTGAAATGAGAAAGGCGACCAAAGGTCGCCTTTTTCGTGTTAGCGCGGACCCTTGTGTG‑GGCCTTGCTCAATTTCTAAAAGCTGGCGCGATTGGACTGTGGGAGCGGGCTTGCCCGCGAACACGGGCGAAGCCCGTGGCCCTCAGCCCAGTACCACTTCCAACACCCGGAT > NC_002947/1364518‑1364814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |