| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,392,036 | T→C | 6.1% | intergenic (+61/‑54) | aspS → / → PP_1214 | aspartate‑‑tRNA ligase/transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,392,036 | 0 | T | C | 6.1% | 274.8 / 3.6 | 92 | intergenic (+61/‑54) | aspS/PP_1214 | aspartate‑‑tRNA ligase/transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (47/39); new base C (3/3); total (50/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 105 total aligned reads displayed.
GTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAA > NC_002947/1391889‑1392182 | gTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTTCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTtcacgtcc > 1:133449/1‑150 (MQ=255) tCATTACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTtcccgtccc < 1:217402/150‑1 (MQ=255) aTGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGc > 2:1356272/1‑150 (MQ=255) tGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcc > 1:850699/1‑150 (MQ=255) aCCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcccc > 1:676273/1‑150 (MQ=255) aCCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGcccc < 2:79487/150‑1 (MQ=255) ccAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGt < 2:1806251/150‑1 (MQ=255) ccAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGt > 2:8197/1‑150 (MQ=255) gCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACACGGAGGGGCGTTGGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcggg < 1:2038600/150‑1 (MQ=255) gCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTACCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCACCCCGTCATggggcggg > 2:738219/1‑150 (MQ=255) cATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATggggcgggg < 1:1356272/150‑1 (MQ=255) tGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGcc > 2:78893/1‑150 (MQ=255) ggcGACGCCAAGGCACTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCTACGCAGGTTTTTTCCCGCCCCGCCCCGTCATGGGGCGTGGCCGt < 2:1570590/148‑1 (MQ=255) tCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCACGTCATGGGGCGGGGCCGtt > 1:1110349/1‑150 (MQ=255) cGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGttt < 1:1636048/150‑1 (MQ=255) cGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGttt < 1:337475/150‑1 (MQ=255) aaGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTc > 1:600306/1‑150 (MQ=255) gCCCTGCGCGAACTCCACATCCGACGGTGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGTTGCATCCACATGGATGTGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTTCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaaa < 2:369566/150‑1 (MQ=255) cTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGa > 1:2183873/1‑150 (MQ=255) tGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGAt < 1:34666/150‑1 (MQ=255) cgcgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCACGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTc < 2:1110349/150‑1 (MQ=255) gcgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCGTGGGTCGGGGCCGTTTGTGATTCAAACGATTCg > 2:893966/1‑150 (MQ=255) gcgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCg < 2:2309642/150‑1 (MQ=255) cgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATg > 1:1984668/1‑118 (MQ=255) cgAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATg < 2:1984668/118‑1 (MQ=255) acaTCCGACTGCGCGAACAGACCAAGGTCGAGTCAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTa > 1:1715198/1‑150 (MQ=255) tGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTc > 2:2157782/1‑150 (MQ=255) gAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTcc > 2:1186488/1‑150 (MQ=255) aCCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTgg > 2:152631/1‑150 (MQ=255) aCCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTgg > 2:667055/1‑150 (MQ=255) aCCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTgg < 2:600306/150‑1 (MQ=255) aCCAAGGTCGAGTAAGCAGTCCCC‑GGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTggg > 1:1525739/1‑150 (MQ=255) ccAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTggg < 1:1786777/150‑1 (MQ=255) cAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTGAAAGGATTCGGAGTCGTTATGGCAGGTCATTCCAAGTGGGc > 1:133626/1‑150 (MQ=255) cAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGc > 2:1359378/1‑150 (MQ=255) cAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacg < 2:2328940/98‑4 (MQ=38) cAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacg > 1:2328940/1‑95 (MQ=38) gTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAAc < 1:8197/150‑1 (MQ=255) gAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGGTTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATc < 1:2157782/150‑1 (MQ=255) gTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCaa > 2:1497969/1‑150 (MQ=255) aGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCa > 2:463310/1‑150 (MQ=255) gCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTg < 2:1351910/121‑1 (MQ=255) gCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTg > 1:1351910/1‑121 (MQ=255) cAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCAcc > 1:1512408/1‑150 (MQ=255) aGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCg < 2:1512408/150‑1 (MQ=255) gTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacgg < 2:599718/83‑5 (MQ=37) gTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGCCCCGCCCCATGACggggcgggacgg > 1:599718/1‑79 (MQ=25) tCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCa > 1:112256/1‑150 (MQ=255) tCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCa > 1:996545/1‑150 (MQ=255) tCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCACTCCAAGTGGGCGAACATCAAGCACCGCa > 1:112374/1‑150 (MQ=255) cccGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCaaa < 2:676273/150‑1 (MQ=255) ccGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAag > 2:2124917/1‑150 (MQ=255) cGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAaga < 2:593943/150‑1 (MQ=255) gcATCCACATGGATGCGCCTTCGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTTGGCGAAAATCAAGCACCGCAAAGAGCGcc > 2:296714/1‑150 (MQ=255) cATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGAt < 1:93572/89‑1 (MQ=255) aTCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAg > 2:1988551/1‑150 (MQ=255) tCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTgg < 2:748683/119‑1 (MQ=255) tCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTgg > 1:748683/1‑119 (MQ=255) acaTGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGATCTGATTGGCGAGTACAAGGGGTCGAACATCAAGCACCGCAAAGAGCGCCAGGATg > 1:1104512/1‑150 (MQ=255) ggATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTtgt < 2:502510/68‑1 (MQ=255) ggATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTtgt > 1:502510/1‑68 (MQ=255) aTGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAaga < 1:2124917/150‑1 (MQ=255) cTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCaa < 1:2080816/100‑1 (MQ=255) cTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCaa > 2:2080816/1‑100 (MQ=255) cTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAagaga < 2:1869425/146‑1 (MQ=255) cTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAagaga > 1:1869425/1‑146 (MQ=255) tttGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAg < 2:166837/133‑1 (MQ=255) tttGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTGTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAg > 1:166837/1‑133 (MQ=255) ttGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAg < 1:667055/150‑1 (MQ=255) ttGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAg < 2:792937/150‑1 (MQ=255) ttGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATCGGGAGGGGCACAATGCGCGTCAAGGCGAACACATCACTCTTGGGGTGTTATGCCTAGTGGGCGAACTTCAAGCACCGCAAAGATCGCCAGCATGCCAAGAGAGGCAAg < 2:850699/150‑1 (MQ=255) gCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGt > 1:826304/1‑150 (MQ=255) cGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTc < 1:152631/150‑1 (MQ=255) gTTTCGACGCAGGTTTTTTTCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCt > 2:2136582/1‑150 (MQ=255) gTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCt > 2:1917188/1‑150 (MQ=255) tttCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaaa < 2:2144785/61‑1 (MQ=255) tttCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCaaa > 1:2144785/1‑61 (MQ=255) gACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGTGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGTCGAACATCAAGCACCGCAACGAGCGCCACGATGCCAACAGAAGCAACGTCTTCAcc > 2:817014/1‑150 (MQ=255) aCGCAGGTTTTTTCCCGTCCCGCCCCGTAATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCa > 1:434850/1‑150 (MQ=255) gCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTc > 1:1017817/1‑79 (MQ=255) gCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTc < 2:1017817/79‑1 (MQ=255) cAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt < 1:1497969/150‑1 (MQ=255) cAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt < 2:2183873/150‑1 (MQ=255) cAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt < 1:2261002/150‑1 (MQ=255) aGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt > 2:370687/1‑149 (MQ=255) aGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGt < 1:370687/149‑1 (MQ=255) gTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGTTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAg > 1:163449/1‑146 (MQ=255) gTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAg < 2:163449/146‑1 (MQ=255) ttCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGt > 2:2130523/1‑150 (MQ=255) cccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGa > 1:1839181/1‑150 (MQ=255) ccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGaa > 1:1884724/1‑150 (MQ=255) ccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGaa < 1:1186488/150‑1 (MQ=255) ccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGaa < 1:2136582/150‑1 (MQ=255) ccgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAATGGGCAAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGaa > 1:153876/1‑150 (MQ=255) cgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAg > 2:2152427/1‑125 (MQ=255) cgtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAg < 1:2152427/125‑1 (MQ=255) gtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGt < 2:737773/74‑1 (MQ=255) gtcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGt > 1:737773/1‑74 (MQ=255) tcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAagagag < 2:788165/118‑1 (MQ=255) tcccgCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAagagag > 1:788165/1‑118 (MQ=255) | GTCATGACCCAGGCCCCTGGCATGGTCGACGCCAAGGCCCTGCGCGAACTGCACATCCGACTGCGCGAACAGACCAAGGTCGAGTAAGCAGTCCCCGGGCGCATCCACATGGATGCGCCTTTGCGTTTCGACGCAGGTTTTTTCCCGTCCCGCCCCGTCATGGGGCGGGGCCGTTTGTGATTCAAAGGATTCGGAGTCGTTATGGCTGGTCATTCCAAGTGGGCGAACATCAAGCACCGCAAAGAGCGCCAGGATGCCAAGAGAGGCAAGGTCTTCACCAAGTGGATCCGTGAA > NC_002947/1391889‑1392182 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |