| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,400,882 | T→G | 7.7% | intergenic (+39/‑130) | ybgF → / → queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,400,882 | 0 | T | G | 7.7% | 324.9 / 17.4 | 118 | intergenic (+39/‑130) | ybgF/queE | TolQRA transport system periplasmic protein/7‑carboxy‑7‑deazaguanine synthase |
| Reads supporting (aligned to +/- strand): ref base T (58/50); new base G (4/5); total (62/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.94e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
CGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATTACGCA > NC_002947/1400733‑1401030 | cgcCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGGGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGt > 1:1874201/1‑150 (MQ=255) ccGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTcg > 2:561476/1‑150 (MQ=255) ggCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAAAAACCCGCGACTGGCGCGGGttt > 2:280944/1‑150 (MQ=255) ccATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAAAAACCCGCGACTGGCGCGGGtttct < 1:280944/150‑3 (MQ=255) cATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCCAGAAAGTGGCCCGCGACTGGCGCGGGttt‑ctt < 1:1230157/150‑1 (MQ=255) aTACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTc > 1:1385782/1‑150 (MQ=255) aTACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTc < 2:1874201/150‑1 (MQ=255) tACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGATATAGTACCCCCGTACCTCTGCCGCTCAACTGGCCCAGTTTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCg < 1:2270627/150‑1 (MQ=255) aCCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGt > 1:1325799/1‑150 (MQ=255) cGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCg < 1:817497/147‑1 (MQ=255) cAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGaa > 1:502348/1‑150 (MQ=255) gTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCAc < 1:2223235/150‑1 (MQ=255) gTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCAc < 1:663698/150‑1 (MQ=255) aGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGccc > 1:131956/1‑150 (MQ=255) aTCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGCAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCTtttt > 2:478578/1‑150 (MQ=255) aTCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCtttt < 1:2139605/150‑1 (MQ=255) tCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCttttt > 2:1609792/1‑150 (MQ=255) tCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCttttt > 1:694596/1‑150 (MQ=255) cTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTc < 2:694596/150‑1 (MQ=255) ttCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGc < 1:1561946/140‑1 (MQ=255) tgcagcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGc > 2:1561946/3‑140 (MQ=255) agcagGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGtta > 1:1432793/1‑148 (MQ=255) agGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTaaa > 1:457778/1‑148 (MQ=255) agGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTaaa < 2:457778/148‑1 (MQ=255) aatcctGATCCCGTACCCCTGCACCTCTGCCACTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAacac < 2:498214/145‑1 (MQ=255) gTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACg > 2:1661041/1‑150 (MQ=255) tCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACgc < 1:1072798/150‑1 (MQ=255) gACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAAAAACCCGCGACTGGCGCGGGtttctttc > 2:1208831/1‑109 (MQ=38) gACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAAAAACCCGCGACTGGCGCGGGtttctttc < 1:1208831/114‑6 (MQ=38) gACCCAGTACCCCGGCACCTCTGCCGCTCAACTCCTCGAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACgctgct > 1:553195/1‑150 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGTTGCTGCg > 2:813645/1‑150 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCg < 1:1609792/150‑1 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCg > 1:953906/1‑150 (MQ=255) ccAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCg > 1:412458/1‑150 (MQ=255) ccAGTACCCCGGCACCTCTGCAGCTCAACTGGCCCAGCGTGCCCTGCAGACGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGCTG‑TTTCGTTAGAAGTACTGGCCTTTTTTCGTAAGCACGCTGCTGCg > 2:497588/1‑150 (MQ=255) ccccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAAc < 2:1325799/150‑1 (MQ=255) cccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACg > 1:557762/1‑150 (MQ=255) ccGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGc > 2:2171266/1‑150 (MQ=255) aCCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAACCTCCCGGAACAGCACGATG‑GCCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGt < 2:1228991/150‑1 (MQ=255) tctGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGa < 1:1705199/150‑1 (MQ=255) tGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTa > 2:2214829/1‑118 (MQ=255) tGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTa < 1:2214829/118‑1 (MQ=255) tGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAA‑AAACCCGCGACTGGCGCGGGtttcttt > 2:494817/1‑87 (MQ=25) tGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAA‑AAACCCGCGACTGGCGCGGGttt‑cttt < 1:494817/91‑2 (MQ=25) tGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCGCGAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTTCCAGTACAGCCCTTTTTTCGTAAACACGCTGCTGCTGATAACGCTGTATAGAGt > 1:1895870/1‑150 (MQ=255) gCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTc > 2:1104436/1‑150 (MQ=255) aaCTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTcgcg > 1:1694984/1‑75 (MQ=255) aaCTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTcgcg < 2:1694984/75‑1 (MQ=255) aaCTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCt < 2:930245/133‑1 (MQ=255) aaCTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCt > 1:930245/1‑133 (MQ=255) aaCTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACa < 1:1723490/150‑1 (MQ=255) aaCTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGAAGCACAACACGGAATAAGCCCGCGCCAGTAACGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACa < 1:1104952/150‑1 (MQ=255) cTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGt > 2:1104444/1‑150 (MQ=255) cAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTg < 2:524399/145‑1 (MQ=255) cAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTg > 1:524399/1‑145 (MQ=255) gCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTg < 1:961233/143‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGa < 1:256295/123‑1 (MQ=255) cTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCgg > 1:2014402/1‑150 (MQ=255) cTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGAGGATAACGCTATGTCGa > 2:256295/1‑123 (MQ=255) cTGCAGAAGCTCTAGGCGTTC‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAac < 2:932305/96‑1 (MQ=255) tGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCTCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTTCGCGACAGGGCCTGACGGAGGCGGa > 2:1874694/1‑150 (MQ=255) tGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCACCGACCGCCCCGGGTTT‑TTTCGCTGCAATCAGGCCCGACTGTTCTGGGACACGCTGCTGTGGATAACGCTAGGGCGAGTGCGCGACAGTGCCTGACGGAGGCGGa < 2:1432793/150‑1 (MQ=255) cAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCAc < 2:2217024/75‑1 (MQ=255) aaGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCTCTATCAGCATAAACTCGCTTCTGCGGAGAACGCTCTGTTGAGAACGCCACACTTCCTGACTGAGGCGGACAGcc > 1:1210956/1‑150 (MQ=255) aaGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGcc > 2:836247/1‑150 (MQ=255) aGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCt < 1:1661041/150‑1 (MQ=255) gCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTg < 2:557762/150‑1 (MQ=255) ctctAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGt < 1:1750053/150‑1 (MQ=255) tctAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGtt < 2:953906/150‑1 (MQ=255) tAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTa > 1:256955/1‑150 (MQ=255) ggCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGa > 2:146482/1‑137 (MQ=255) tG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCa < 2:256955/150‑1 (MQ=255) g‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTTGTAAACACGCTGCTGCGGATAACGCTATGTCGAATCCGCGACAGTGCCTGAAGGAGGCGGACAGCCTGTTTAGCTGTTAc > 2:1064248/1‑150 (MQ=255) g‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGc < 2:1747102/117‑1 (MQ=255) gCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGcc > 1:1851748/1‑150 (MQ=255) cTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTg < 1:1734512/145‑1 (MQ=255) tCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAATCATATGTCGAGTCCGCGACAGTGCCTGACGGCGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGc > 1:403953/1‑150 (MQ=255) gaaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCAt > 2:1030015/1‑150 (MQ=255) gaaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCAt > 1:485938/1‑150 (MQ=255) aaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGc < 1:1602241/128‑1 (MQ=255) aaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGc > 2:1602241/1‑128 (MQ=255) aaagaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTGTGTCTTAAATATGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATg > 2:913323/1‑150 (MQ=255) aaaaaCCCGCGACTGGCGCGGGTTTCGTTCGGTAGAATCACTGCCCTTTTGTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGc < 1:912393/148‑1 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCCATGCACGCTGTTCGTAAACACGCTGCTGCGGATACCCAGAGGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 1:1104444/150‑1 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa > 1:461611/1‑150 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 1:561476/150‑1 (MQ=255) gaaaCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCaa < 2:1851748/150‑1 (MQ=255) aaCCCGCGACTGGCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGa > 2:126445/1‑150 (MQ=255) aCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGac < 2:1385782/150‑1 (MQ=255) aCCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGac > 1:1734927/1‑150 (MQ=255) ccGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGacac < 1:2171266/150‑1 (MQ=255) cgcgCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGAcaca < 2:1210956/150‑1 (MQ=255) gcgcCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACAt > 2:1984339/1‑150 (MQ=255) gcgcCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACAt > 1:2162659/1‑150 (MQ=255) cgcCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACAtt < 1:1030015/150‑1 (MQ=255) gcCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGt > 1:1541090/1‑119 (MQ=255) gcCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGt > 1:1541555/1‑119 (MQ=255) gcCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGt < 2:1541090/119‑1 (MQ=255) ccAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATTAc < 1:2197617/150‑1 (MQ=255) gTCGCGGGATT‑TTTCTTTAGAATTAACGCCCTTTTTTTGTAAATCTTCTGCTGCGGATAACGGTATGTCGAGACGACGACAGTGCCTGAAGGAAGCGGACCGCCTGTTTTGCTGTTCCGCCCGTGCCGAGCCTGCAAGACACATTACGCa > 2:1067846/1‑150 (MQ=255) | CGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGACCCAGTACCCCGGCACCTCTGCCGCTCAACTGGCCCAGCGTGACCTGCAGAAGCTCTAGGCGTTG‑TCGCTGTACCGCTCGAAAGAAACCCGCGCCAGTCGCGGGTTT‑TTTCGTTAGAATCACTGCCCTTTTTTCGTAAACACGCTGCTGCGGATAACGCTATGTCGAGTCCGCGACAGTGCCTGACGGAGGCGGACAGCCTGTTTAGCTGTCACGCCCGTGGCGAGCATGCAAGACACATTACGCA > NC_002947/1400733‑1401030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |