| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,469,821 | A→T | 5.7% | L110Q (CTG→CAG) | algK ← | alginate biosynthesis protein AlgK |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,469,821 | 0 | A | T | 5.7% | 334.9 / 9.2 | 105 | L110Q (CTG→CAG) | algK | alginate biosynthesis protein AlgK |
| Reads supporting (aligned to +/- strand): ref base A (53/46); new base T (3/3); total (56/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.59e-01 | |||||||||||
Only 100 of 114 total aligned reads displayed.
GTTGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAGC > NC_002947/1469673‑1469970 | gTTGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACcagcag > 2:593598/1‑150 (MQ=255) cTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGcc > 1:560364/1‑150 (MQ=255) cTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGcc > 2:783175/1‑150 (MQ=255) ggggAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAg < 2:2047526/150‑1 (MQ=255) ggggAAACTCTCCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGCCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTACTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCGCCTGCTGGTGGCCAAg < 1:948987/150‑1 (MQ=255) aCTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGgcgcgc < 2:1472770/150‑1 (MQ=255) ctctGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCt > 2:1876485/1‑150 (MQ=255) tGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTgg < 1:318946/150‑1 (MQ=255) gTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGcgcg > 2:1144140/1‑150 (MQ=255) gTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGcgcg > 1:1821921/1‑150 (MQ=255) tAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCATGCGGCCAAGGCGCGCTTGGGCGCGt < 1:442037/150‑1 (MQ=255) tAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGt < 1:1132109/150‑1 (MQ=255) tAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGt < 1:255944/150‑1 (MQ=255) gAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCgc < 2:1607882/150‑2 (MQ=255) gTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGt > 1:1053941/1‑150 (MQ=255) gTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGt > 1:1786674/1‑150 (MQ=255) tAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTg > 2:1178768/1‑150 (MQ=255) tAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCATGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTg > 1:2092946/1‑150 (MQ=255) gCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTggcgg > 1:674111/1‑150 (MQ=255) gCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCa < 2:1057152/150‑1 (MQ=255) cAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAgc < 2:560364/150‑1 (MQ=255) aGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAgcg > 2:2188282/1‑150 (MQ=255) gAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGAt < 1:1973014/150‑1 (MQ=255) gAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGAt < 2:1471791/150‑1 (MQ=255) aTCAGGGTATTGCTTCGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAg < 1:2227817/150‑1 (MQ=255) gggTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTgg > 1:970188/1‑150 (MQ=255) gggTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTgg < 2:1442586/150‑1 (MQ=255) tATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCGACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGa > 1:1795988/1‑121 (MQ=255) tATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGa < 2:1795988/121‑1 (MQ=255) tATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCt > 2:786907/1‑150 (MQ=255) aTTGCTTTGGCCCTGTTTCACGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTc < 2:1771915/150‑1 (MQ=255) cTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCt > 2:2155864/1‑150 (MQ=255) ttGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACcagca < 1:1022815/83‑1 (MQ=255) ggCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCt < 1:2135527/150‑1 (MQ=255) ggCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTGGGGCGCGTGGCAACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCt < 2:1250722/150‑1 (MQ=255) gCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCtt > 1:2277383/1‑150 (MQ=255) cccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTggcgg < 1:2199010/118‑1 (MQ=255) cccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTggcgg > 2:2199010/1‑118 (MQ=255) cccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGcc > 2:1412189/1‑138 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGt > 2:1853575/1‑112 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGt < 1:1853575/112‑1 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGa < 2:173875/150‑1 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGa > 2:1343483/1‑150 (MQ=255) ccTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGa < 2:1053941/150‑1 (MQ=255) ttCGCGGCCTGCTTGAGCAGGGTTTCGGCTGCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGc < 1:7725/150‑1 (MQ=255) gcgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTgg < 1:1082635/127‑1 (MQ=255) gcgGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTgg > 2:1082635/1‑127 (MQ=255) gCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAgggg > 2:180208/1‑150 (MQ=255) tGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGGcg > 1:1860658/1‑150 (MQ=255) gcgCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGTCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGt < 2:907810/148‑1 (MQ=255) gAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGt < 1:1514952/150‑1 (MQ=255) aGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 1:1178768/150‑1 (MQ=255) aGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 1:1282892/150‑1 (MQ=255) cAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGc < 1:1876485/150‑1 (MQ=255) tttCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGGGCGGGGCGACGTGGCGGCCGCTGCGCGATAGTTGTTGTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCt > 1:1686983/1‑150 (MQ=255) tttCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCt < 2:910832/150‑1 (MQ=255) ttCGGCCTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCtt < 1:2146796/150‑1 (MQ=255) ggCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg > 2:884608/1‑139 (MQ=255) ggCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 1:884608/139‑1 (MQ=255) gCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATg > 1:1470180/1‑150 (MQ=255) gCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATg > 2:1141384/1‑150 (MQ=255) gCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATg > 2:1565870/1‑150 (MQ=255) cACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCa < 2:1821921/150‑1 (MQ=255) cACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCAGGTGGCCACCTTGATGTCCGCCa < 1:783175/150‑1 (MQ=255) aCGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAg < 1:1664450/150‑1 (MQ=255) cGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGa < 1:1144140/150‑1 (MQ=255) gCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACt > 1:773906/1‑150 (MQ=255) gCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACt > 2:762272/1‑150 (MQ=255) gCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACt < 1:762272/150‑1 (MQ=255) cTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTg > 2:174017/1‑150 (MQ=255) cTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTg > 2:554905/1‑150 (MQ=255) cTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTg > 2:2044668/1‑150 (MQ=255) tGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTgc > 2:1706932/1‑150 (MQ=255) tGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCtt > 1:637028/1‑150 (MQ=255) gCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTc < 1:2188282/150‑1 (MQ=255) gCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTc > 2:2104364/1‑150 (MQ=255) cTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCg < 1:174017/150‑1 (MQ=255) tGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTCGCGCTTCGc > 2:651191/1‑150 (MQ=255) tCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCAAGGCCGACTTGCGCTTCGCTg > 2:1865391/1‑150 (MQ=255) cGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTa > 1:1654451/1‑150 (MQ=255) gccTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGTGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGAt > 2:2121633/3‑119 (MQ=255) gccTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGTGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGAt < 1:2121633/117‑1 (MQ=255) gCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 1:625013/107‑1 (MQ=255) gCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg > 2:625013/1‑107 (MQ=255) cTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg < 1:526890/106‑1 (MQ=255) cTTGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTg > 2:526890/1‑106 (MQ=255) ttGGCCGCCTGCTGGTGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGccc > 2:1180442/1‑150 (MQ=255) ttGGCCACCAGCAGGCGGCCAAGGCGCGCTTGTGCGCGTCGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGccc < 1:251496/150‑1 (MQ=255) ttGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGa > 1:884851/1‑92 (MQ=255) ttGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGa < 2:884851/92‑1 (MQ=255) ccaccaGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGt > 2:1508225/1‑150 (MQ=255) ccaccaGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGt > 2:334899/1‑150 (MQ=255) caccaGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGTTTTGCAAGGGGTCGCGGGTTGCCACCTTTATGTCCGCCAGCCCGACTAGCTCTTCTCTTTATCCCAGGTc > 2:1653386/1‑150 (MQ=255) caccaGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTc < 2:1860658/150‑1 (MQ=255) agcagGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTTGCGTCCGCAGCGCGATAGGTGGCCTAGGCCATGGTTTTTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGcc < 1:2155864/150‑1 (MQ=255) cagGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAg < 1:1551623/150‑1 (MQ=255) agGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGAt < 1:106005/104‑1 (MQ=255) agGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGAt > 2:106005/1‑104 (MQ=255) agGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAgc < 1:1508225/150‑1 (MQ=255) agGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAgc < 1:2044668/150‑1 (MQ=255) | GTTGACCTTGGGGAAACTCTGCGGGTAGCTGAGGTAGAGCATTGCCAGCGGAATCAGGGTATTGCTTTGGCCCTGTTTCGCGGCCTGCTTGAGCAGGGTTTCGGCTTCCTCACGTTCGGCCTGGGTGCTGTCCGGCTTGGCCACCAGCAGGCGGCCAAGGCGCGCTTGGGCGCGTGGCGACGTGGCGGCCGCAGCGCGATAGGTGGCCTCGGCTTCCTTGATTTGCGAGGGGTCGCGGGTGGCCACCTTGATGTCCGCCAGGCCGACTTGCGCTTCGCTGTAGCCCAGGTCGGCCAGC > NC_002947/1469673‑1469970 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |