| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,509,437 | G→A | 6.2% | H109Y (CAC→TAC) | PP_1324 ← | endonuclease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,509,437 | 0 | G | A | 6.2% | 227.1 / 3.4 | 80 | H109Y (CAC→TAC) | PP_1324 | endonuclease |
| Reads supporting (aligned to +/- strand): ref base G (37/38); new base A (3/2); total (40/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.87e-01 | |||||||||||
ATTGCATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTGCAAC > NC_002947/1509288‑1509585 | aTTGCATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg > 2:1137456/1‑150 (MQ=255)aTTGCATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg < 1:193365/150‑1 (MQ=255) tGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTAcc < 2:2076843/150‑1 (MQ=255) cATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGc < 1:1038465/150‑1 (MQ=255) cATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGc > 2:1038465/1‑150 (MQ=255) cATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGGTCTTCAGCCATTGAACCGGTCTGCCTGCATGCTGGCTAcccccc > 1:174362/1‑147 (MQ=255) tCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTAcc > 2:566961/1‑144 (MQ=255) tCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTAcc < 1:566961/144‑1 (MQ=255) cTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAgg < 1:2236109/150‑1 (MQ=255) gTGACCTTAAATGGGGCGGTGGCCTTTGCTACGACCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAAAGCAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCCTTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCg > 1:1939534/1‑150 (MQ=255) tGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGa < 2:1903177/150‑1 (MQ=255) gACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGAc > 2:1818610/1‑150 (MQ=255) aCCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGAcc > 2:2048629/1‑150 (MQ=255) aCCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGGTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGAcc > 1:480479/1‑150 (MQ=255) ttAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACg > 1:1277658/1‑150 (MQ=255) aaaTGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTc < 2:2096848/150‑1 (MQ=255) ggggCGGTGGCCTTTGCTACTCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCCAAg > 2:514603/1‑150 (MQ=255) gggCGGTGGCCTTTGCTAGGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGc < 2:1590044/150‑1 (MQ=255) ggCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAggg < 2:480479/150‑1 (MQ=255) gCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAGGCGGCAgggg > 2:806085/1‑150 (MQ=255) gCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAgggg < 2:1277658/150‑1 (MQ=255) tttGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg < 2:925404/110‑1 (MQ=255) tttGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg > 1:925404/1‑110 (MQ=255) cgcgCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTTAAGCGGTCTGCCTGCATGGTGGCTACGCTGCAGGGCGACCACGTCGGAGCGGCAGAGGTAGTTGcccc > 2:529150/1‑150 (MQ=255) gcgcAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGtt < 1:1537609/144‑1 (MQ=255) gcgcAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGtt > 2:1537609/1‑144 (MQ=255) caacaaCGACCAGCCCGCAATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTg < 1:264413/150‑1 (MQ=255) aacaacGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTgg < 1:2048629/150‑1 (MQ=255) aacaacGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTgg < 2:1993838/150‑1 (MQ=255) aacaacGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTgg < 1:434255/150‑1 (MQ=255) acaacGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTggg > 2:1319995/1‑150 (MQ=255) caacGACCAGCCCTCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc < 1:529150/150‑1 (MQ=255) aacGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGcc > 2:235813/1‑150 (MQ=255) gACCAGCCCGCGATACATAGAGCAAAAAAAACGAATTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGcctcc > 1:1436291/1‑150 (MQ=255) gACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGAcc < 1:1351468/111‑1 (MQ=255) gACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGAcc > 2:1351468/1‑111 (MQ=255) aGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCt > 1:1612884/1‑150 (MQ=255) cccGCGATACATAGAGC‑AAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAg < 2:1836497/119‑1 (MQ=255) cccGCGATACATAGAGC‑AAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAg > 1:1836497/1‑119 (MQ=255) ccGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc < 1:803490/139‑1 (MQ=255) ccGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc > 2:803490/1‑139 (MQ=255) ccGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCa < 1:1512605/150‑1 (MQ=255) aCATAGAGCAAAAAAAACGAATTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAg < 2:1436291/150‑1 (MQ=255) aCATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAg > 1:1771330/1‑150 (MQ=255) cATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCGCAGTGGGCGTCCTTCTGAAGGaaaggg > 2:916328/1‑146 (MQ=255) cATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAgg < 2:1771330/150‑1 (MQ=255) gagCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTGTGTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTgg < 2:187071/150‑1 (MQ=255) cAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAGGGTAGCCACCATGCAg > 1:467683/1‑82 (MQ=38) cAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAGGGTAGCCACCATGCAg < 2:467683/82‑1 (MQ=38) aaaaaaaaCGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTggcggc > 2:1059041/1‑150 (MQ=255) aaaaaaaaCGAAGTGGGTTCAGCATTCGAAGGCGCTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTggcggc < 1:1319995/150‑1 (MQ=255) aaaaaaCGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCaa < 1:128694/150‑1 (MQ=255) aaCGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTCGCTGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCAc < 1:614726/150‑1 (MQ=255) aCGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCAcc < 2:1612884/150‑1 (MQ=255) gAAGTGGGTTCAGCATTCGAAGGCGTTTTTTTTTTTTTTTTTTGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCaa > 2:976992/1‑150 (MQ=255) gAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCGGCAGGAACAGGGTGGCGGCAAGCACCac > 2:1775269/1‑149 (MQ=255) aaGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAAc > 1:1869100/1‑150 (MQ=255) gTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCg > 2:340275/1‑150 (MQ=255) tCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTgcgc > 2:1974842/1‑150 (MQ=255) gAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg > 1:852483/1‑42 (MQ=255) gAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCAtggtg < 2:852483/42‑1 (MQ=255) gAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc < 1:1848163/96‑1 (MQ=255) gAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGc > 2:1848163/1‑96 (MQ=255) gAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTgg < 1:257859/119‑1 (MQ=255) gAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTgg > 2:257859/1‑119 (MQ=255) aaGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAgg > 2:690624/1‑114 (MQ=255) aaGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAgg < 1:690624/114‑1 (MQ=255) cGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGa < 1:1137456/150‑1 (MQ=255) gTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGAt > 1:1298787/1‑150 (MQ=255) tttCAGCCATTGAAGCGGTCGGCCATCATGATGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACt < 1:514603/150‑1 (MQ=255) cAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTc < 2:1869100/150‑1 (MQ=255) gCCATTGAAGCTGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCga < 1:916328/150‑1 (MQ=255) gCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCATGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCga > 1:2071449/1‑150 (MQ=255) ccATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAGGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCgag < 1:806085/150‑1 (MQ=255) gAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGAGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACAAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGCGAgcgc > 2:2230647/1‑150 (MQ=255) aGCGGTCTGCCTGCATGGTGGCTACCCTGCATGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCt < 2:2071449/150‑1 (MQ=255) cGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTcc < 1:1818610/150‑1 (MQ=255) gTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGa > 1:290503/1‑150 (MQ=255) gTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGCAGATGCGTTGGTGAGCGCCTCCGa > 2:540962/1‑150 (MQ=255) tCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGaa < 1:976992/150‑1 (MQ=255) ccttcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGccc < 1:588313/150‑1 (MQ=255) ctgcATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCcg > 2:1424517/1‑150 (MQ=255) ctgcAGGGTAGCCACCATGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTc < 2:1412188/71‑1 (MQ=37) ctgcAGGGTAGCCACCATGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTc > 1:1412188/1‑71 (MQ=37) ctgcAGGGTAGCCACCATGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGTGCGCCTCCGAAGcccc > 2:1045913/1‑149 (MQ=255) aTGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTg > 1:1284778/1‑150 (MQ=255) tggtggCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGccc < 2:868753/113‑1 (MQ=255) tggtggCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGGGGCGGCAAGCACCAACCGTTTCTGCTTGCGccc > 1:868753/1‑113 (MQ=255) tggCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTGCAAc < 2:174362/150‑1 (MQ=255) | ATTGCATGTCCATCTGGTGACCTTAAATGGGGCGGTGGCCTTTGCTACGCGCAACAACGACCAGCCCGCGATACATAGAGCAAAAAAAACGAAGTGGGTTCAGCATTCGAAGGCGTTTTTCAGCCATTGAAGCGGTCTGCCTGCATGGTGGCTACCCTGCAGGGCGACCACGTCGAAGCGGCAGGGGTAGTTGCCCCAGTGGGCCTCCTTCTGCAGGAACAGGGTGGCGGCAAGCACCAACCGTTTCTGCTTGCGCCCGTCGATACTGTCGAGAGCGCCTCCGAAGCCCGCGTGCAAC > NC_002947/1509288‑1509585 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |