| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,526,622 | T→A | 5.1% | I256N (ATT→AAT) | ddlB → | D‑alanine‑‑D‑alanine ligase B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,526,622 | 0 | T | A | 5.1% | 422.0 / 10.0 | 137 | I256N (ATT→AAT) | ddlB | D‑alanine‑‑D‑alanine ligase B |
| Reads supporting (aligned to +/- strand): ref base T (69/61); new base A (4/3); total (73/64) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.51e-01 | |||||||||||
Only 100 of 140 total aligned reads displayed.
GCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTG > NC_002947/1526473‑1526770 | gccgccGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAt > 2:1656504/1‑150 (MQ=255) cgccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTg < 1:518427/150‑1 (MQ=255) gccgATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTgg < 1:972924/150‑1 (MQ=255) gATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCAt > 2:1754312/1‑150 (MQ=255) gATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCAt < 2:168139/150‑1 (MQ=255) aTCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATc < 1:675184/150‑1 (MQ=255) cGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGa < 1:1614316/150‑1 (MQ=255) ggTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTgg > 2:2032812/1‑150 (MQ=255) gTACGCAGCACGTGTTCTACGACTATGACGCCAAGTAAAACGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTggg < 2:306023/150‑1 (MQ=255) gcggcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTgg > 1:2329888/4‑132 (MQ=255) gccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTgg < 2:2329888/132‑1 (MQ=255) gccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCg < 1:894430/150‑1 (MQ=255) gccgcACGTGTTCTACGACTATGACGCAAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCg > 1:1634904/1‑150 (MQ=255) ccgcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACGGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCgg < 1:585675/150‑1 (MQ=255) gcACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGtt < 1:147271/150‑1 (MQ=255) cACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGACAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCgcag > 2:1763297/1‑133 (MQ=255) cACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGACAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTTCGATGCCAATGGCATCGCAg < 1:1763297/136‑1 (MQ=255) tCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa > 2:2081680/1‑150 (MQ=255) tCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa > 1:498685/1‑150 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg > 2:601057/1‑150 (MQ=255) tACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATg > 2:1821472/1‑150 (MQ=255) gACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAg < 1:1339229/150‑1 (MQ=255) aCTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAgg < 2:148819/150‑1 (MQ=255) tGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGa > 1:87138/1‑150 (MQ=255) gACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAg > 2:2284856/1‑150 (MQ=255) gCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAg > 1:1671919/1‑150 (MQ=255) cAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGa > 2:318636/1‑141 (MQ=255) cAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGa < 1:318636/141‑1 (MQ=255) gTACATCGTCAACGATACCCAGCACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCg > 2:1517349/1‑150 (MQ=255) cATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGa < 2:1273437/135‑1 (MQ=255) cATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGa > 1:1273437/1‑135 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTgg > 1:876077/1‑107 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTgg < 2:876077/107‑1 (MQ=255) tCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCCCCCAGCCTTCGATGCCAATg > 2:698251/1‑94 (MQ=38) tCAACGATACCCAGTACCGCATCCAGTGCGAGCTAGATCCCGTCAAAGAACAGGAACGAATCGACCTAACACCTGGA‑TCCAACGATTGCATTGGCATCTAATGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgc > 2:2017778/1‑150 (MQ=255) gATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTg < 1:1555292/111‑1 (MQ=255) gATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTg > 2:1555292/1‑111 (MQ=255) gATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGgcagatc > 1:1676105/1‑145 (MQ=255) gATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGACAAGGAACAGGAACTGATCGGCCTGACCGCGCGC‑GCCTGAGGTGCCATTGGCATCGAAGGCCGGGGGCGGTTGTACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTc > 2:956406/1‑150 (MQ=255) ccAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑gctgg < 1:451729/150‑5 (MQ=255) ccAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGt > 2:1113446/1‑150 (MQ=255) cAGCACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTc < 1:1517349/150‑1 (MQ=255) ccGCATCGCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGT‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAactc < 2:890447/150‑3 (MQ=255) aTCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCa > 2:1405197/1‑150 (MQ=255) aTCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCa < 1:1821472/150‑1 (MQ=255) ccGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCa < 1:1754312/150‑1 (MQ=255) tGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGc < 1:2284856/150‑1 (MQ=255) ggCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGcc > 2:1570473/1‑111 (MQ=255) ggCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGcc < 1:1570473/111‑1 (MQ=255) gCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGGTGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGAc > 2:932958/1‑150 (MQ=255) gCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGc < 2:2263571/109‑1 (MQ=255) gCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGATTGGACGTGATGCAGGACGAGCAGGGc > 1:2263571/1‑109 (MQ=255) cTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGa < 1:1016838/148‑1 (MQ=255) gATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCAtt > 1:578719/1‑57 (MQ=255) aTAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa < 2:1910381/87‑1 (MQ=255) aTAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGa > 1:1910381/1‑87 (MQ=255) tAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCa > 1:1959656/1‑150 (MQ=255) tCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGcc < 1:2081680/150‑1 (MQ=255) ggaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGt < 2:166010/150‑1 (MQ=255) gaacaggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAaca > 2:1613866/1‑118 (MQ=255) aggaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCa > 2:619681/1‑150 (MQ=255) gaacTGATCGCCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCCCCAGGCATGACAGATCATAGCCTGGTGCCCATg < 2:575554/150‑1 (MQ=255) gaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATg > 2:1097169/1‑150 (MQ=255) gaacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGGGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATg > 1:790816/1‑150 (MQ=255) aacTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATgg < 2:181301/150‑1 (MQ=255) tGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATggcgg > 2:402844/1‑150 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCAt > 1:2154668/1‑115 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCAt < 2:2154668/115‑1 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTg > 1:1878070/1‑150 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTg > 2:274038/1‑150 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTg > 1:1839869/1‑150 (MQ=255) aCCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCAGCGGCGGGC‑TGCTC‑AAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTg > 1:1677699/1‑150 (MQ=255) tccGCTCTC‑GCTTGCTATGCCATGGGTAGCGAAGGCTGTGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCt < 2:725327/149‑1 (MQ=255) aCCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCt > 2:1163904/1‑150 (MQ=255) cgcgcgc‑gCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTgg < 1:705326/150‑1 (MQ=255) cgcgcgc‑gCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTgg > 2:1277689/1‑150 (MQ=255) cgcgcgc‑gCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAAAACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTgg > 1:1398750/1‑150 (MQ=255) gcgc‑gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATc < 1:1525421/113‑1 (MQ=255) c‑gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGa < 2:1839869/150‑1 (MQ=255) c‑gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGa < 1:681561/150‑1 (MQ=255) c‑gcCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGa < 2:87138/150‑1 (MQ=255) ccTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCa < 1:143491/95‑1 (MQ=255) ccTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCa > 2:143491/1‑95 (MQ=255) cttcGATGCCAATGGCATCGCAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACtt > 2:1980162/4‑150 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGa < 2:667489/101‑1 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGa > 1:667489/1‑101 (MQ=255) cTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGGGGCCCGTGCGGCTGGCCTGGACtt > 2:541450/1‑150 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGAGTTc < 1:1163904/150‑1 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc > 1:2147981/1‑150 (MQ=255) tGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAAAACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc < 2:1398750/150‑1 (MQ=255) tGCGATGCAATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTc > 1:2314644/1‑150 (MQ=255) gCGATGCCATTGTCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGAGCGTGACTGG‑‑AGTTCAGACGTGTGCTTTTGTCAACACCTGACCTGGCATGACAGATCCTAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTcc < 1:1113446/150‑1 (MQ=255) gCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTcc > 2:1612667/1‑150 (MQ=255) cGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCa < 1:961210/150‑1 (MQ=255) tGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCa > 2:325286/1‑150 (MQ=255) gCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCaa < 2:297366/150‑1 (MQ=255) cATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGAc < 1:315315/139‑1 (MQ=255) aTTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTcc < 1:1559466/142‑1 (MQ=255) aTTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTcc > 2:1559466/1‑142 (MQ=255) aTTGGCATCGAAGGCTGGGGGCGGTTAGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTg > 1:2240609/1‑150 (MQ=255) | GCCGCCGATCGCCCTGGGTACGCCGCACGTGTTCTACGACTATGACGCCAAGTACATCGTCAACGATACCCAGTACCGCATCCCGTGCGGGCTGGATAGCGTCAAGGAACAGGAACTGATCGACCTGACCGCGCGC‑GCCTGCGATGCCATTGGCATCGAAGGCTGGGGGCGGTTGGACGTGATGCAGGACGAGCAGGGCCGGTTCTGGC‑TGCTC‑GAAGTCAACACCGCACCAGGCATGACAGATCATAGCCTGGTGCCCATGGCGGCCCGTGCGGCTGGCCTGGACTTCCAGCAACTG > NC_002947/1526473‑1526770 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |