| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,563,870 | A→C | 5.1% | intergenic (+94/+28) | PP_1372 → / ← pitB | hypothetical protein/phosphate transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,563,870 | 0 | A | C | 5.1% | 246.0 / 4.4 | 89 | intergenic (+94/+28) | PP_1372/pitB | hypothetical protein/phosphate transporter |
| Reads supporting (aligned to +/- strand): ref base A (44/39); new base C (2/3); total (46/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.82e-01 | |||||||||||
GCGGCAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGCCACTTTTGT > NC_002947/1563722‑1564019 | gcggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAg > 2:742746/1‑150 (MQ=255) cggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAgg < 1:1200300/150‑1 (MQ=255) ggcAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCCCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCGATGAAAAAGGCGCCCGAggg < 1:1954363/150‑1 (MQ=255) aGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCAGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGgcgc < 2:315711/150‑1 (MQ=255) gTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAggg < 2:146816/146‑1 (MQ=255) gTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAggg > 1:146816/1‑146 (MQ=255) gTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGcc < 2:1406234/150‑1 (MQ=255) tGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAGAAGGCGCCCTCGGGCGCCttttt < 1:442124/150‑4 (MQ=255) tGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttcat < 2:49586/150‑1 (MQ=255) cgGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTtcattcat < 1:354629/150‑1 (MQ=255) ttGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCg > 1:2153131/1‑150 (MQ=255) tGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGgtgt < 1:445661/150‑1 (MQ=255) ggggTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTc > 1:1468046/1‑150 (MQ=255) gttgttAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAg > 2:1251213/1‑150 (MQ=255) ttgttAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGc < 1:1975326/150‑1 (MQ=255) gggggCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATgg > 2:1128277/1‑150 (MQ=255) aaGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCATAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTgg < 1:234978/150‑1 (MQ=255) aaGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAAGAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTgg > 2:1680410/1‑150 (MQ=255) gTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACgccagc > 2:691277/1‑150 (MQ=255) gTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACgccagc > 2:1519768/1‑150 (MQ=255) tAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACgccagcc < 1:1251213/150‑1 (MQ=255) tAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACgccagcc > 2:550407/1‑150 (MQ=255) tCTTCCTGCGCCGCGCCATACCCTTGGTAGCGCAAGCACGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACAGCTCTGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCTGTGCCACTCAGCCAATGGCTTTGGACGCCAGCCAGa > 1:152622/1‑150 (MQ=255) ttCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAAc < 1:857009/150‑1 (MQ=255) tGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAggc > 1:1470699/1‑150 (MQ=255) tGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGCTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAggc < 1:1675630/150‑1 (MQ=255) cgccgcgccATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAggccg < 1:1680410/150‑1 (MQ=255) cATACCCTTGGTAGAACAACCCCGCTGTGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAg > 2:797527/1‑150 (MQ=255) tccccTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTCGACGCCAGCCAGAACAGGCCGGCCGCCAGGc < 1:1045342/148‑1 (MQ=255) ccTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCa > 1:657314/1‑150 (MQ=255) ccTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCACAAAATGGATGTGCACGCCAGCCATAACATGCCGGCCGCCAGGCGCa > 2:21829/1‑150 (MQ=255) cTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttca > 2:35313/1‑83 (MQ=255) cTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCttca < 1:35313/83‑1 (MQ=255) cTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCATTGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCTAGGCCCAt > 2:341035/1‑150 (MQ=255) gaGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGagg < 1:691277/149‑1 (MQ=255) caAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggcaggc > 1:718867/1‑150 (MQ=255) aaGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAggcaggca > 1:2105868/1‑150 (MQ=255) aaGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCACATCGAggcaggca > 2:1080209/1‑150 (MQ=255) ccGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGt > 2:289765/1‑150 (MQ=255) gCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCa < 1:171087/150‑1 (MQ=255) cTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAg > 1:1662387/1‑150 (MQ=255) cTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAg < 1:742746/150‑1 (MQ=255) cTCCGGCAAAGAACAAGGGGGCGTTGCAAGAACTGATATGACAAAGGCTCCCCGGGGCGCCTTCATTCATTGCGGTGTCACTCTTCCGGCGGCGTTGGACGGCAGCCAGAACAGGACGGCCGCCAGGCTCGTCGGGGCAGGCAGGGTCAg < 2:152622/150‑1 (MQ=255) ctgCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAc > 1:336819/3‑150 (MQ=255) cGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCATTGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCTAGGCCCATCGAGGCAGGCAGGGTCAGGAc < 1:341035/150‑1 (MQ=255) cGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAc > 2:873740/1‑150 (MQ=255) cGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAc < 2:1468046/150‑1 (MQ=255) cGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGACGCAGGCAGGGCCAGGAc > 2:1921450/1‑150 (MQ=255) ggCAAAGAACAAGGTGGCGGAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGAcc < 2:1026294/150‑1 (MQ=255) cAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCa < 2:2105868/150‑1 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAg > 1:1879486/1‑119 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAg < 2:1879486/119‑1 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt > 1:943657/1‑150 (MQ=255) aaaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCAt > 1:219474/1‑150 (MQ=255) aaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGa > 2:947618/1‑127 (MQ=255) aaGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGa < 1:947618/127‑1 (MQ=255) aaCAAGGTGGCGTAGGCATAACGGCTATNAAAAAGGCGCCCGAGNGNGNCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCGGGGTCAGGACCCATGCca > 1:1220336/1‑150 (MQ=255) aaCAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCca > 2:1016609/1‑150 (MQ=255) aaCAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCca < 2:817492/150‑1 (MQ=255) aCAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCcag < 1:873740/150‑1 (MQ=255) cAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCGAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCcagc > 1:2139374/1‑150 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTtcattcat < 2:2315541/54‑1 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTtcattcat > 1:2315541/1‑54 (MQ=255) ggTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAgg > 1:1770628/1‑150 (MQ=255) ggCGTAGTCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATg < 2:657314/150‑1 (MQ=255) gTAGGCATAACGGCTATGAAAAAGGCGCCCGCGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGtt > 2:1439029/1‑150 (MQ=255) gTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGtt > 1:940279/1‑150 (MQ=255) gTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCAGTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCAGCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGtt < 2:81755/150‑1 (MQ=255) tatgCATAACCGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGttt < 2:1220336/147‑1 (MQ=255) tAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATAGAGGCAGGCAGGGTCAGGACCCATGCCAGCACGATGGttt < 2:336819/150‑1 (MQ=255) gCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTca > 1:82350/1‑150 (MQ=255) gCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTca < 2:2153131/150‑1 (MQ=255) aTAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTcaca < 2:82350/150‑1 (MQ=255) gggttATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTgc < 2:1170931/146‑1 (MQ=255) tATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTgccgcc > 2:1436391/1‑150 (MQ=255) aaaaaGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCAGCCAGGCCCATCGAGGCAGGCAGGGCCAGGACCCATGCCCGCAGGATGGTTTTCACAGTGCCGCCTTGc > 2:291637/1‑150 (MQ=255) tgaaGGCGCCCTCGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCa < 2:1011289/148‑1 (MQ=255) tgaaGGCGCCCTCGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCAAGGCCCATCGAGGCAGGCAGGGTCAGGa < 2:1577299/109‑1 (MQ=255) tgaaGGCGCCCTCGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCAAGGCCCATCGAGGCAGGCAGGGTCAGGa > 1:1577299/3‑111 (MQ=255) aaaaGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGt > 2:1885079/1‑106 (MQ=255) aaaaGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGt < 1:1885079/106‑1 (MQ=255) aaaGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAg > 1:2182272/1‑150 (MQ=255) gcCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca > 2:1056978/1‑91 (MQ=255) gcCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGaggca < 1:1056978/91‑1 (MQ=255) gcCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGCCACt > 2:1502534/1‑150 (MQ=255) gcCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGCCACt > 1:931646/1‑150 (MQ=255) cGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGcaggcagg < 2:491873/94‑1 (MQ=255) cGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGcaggcagg > 1:491873/1‑94 (MQ=255) cGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGCCACtttt < 2:943657/150‑1 (MQ=255) aGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGCCACTTttgt < 1:1436391/150‑1 (MQ=255) | GCGGCAGTTGGTGCGCGGGTTGATGGGGTCGTTGTTAGGGGGCAAGAAAAGGTAGTCTTCCTGCGCCGCGCCATACCCTTGGTAGCACAAGCCCGCTCCGGCAAAGAACAAGGTGGCGTAGGCATAACGGCTATGAAAAAGGCGCCCGAGGGCGCCTTCATTCATTGCGGTGTCACTCAGCCAATGGCTTTGGACGCCAGCCAGAACAGGCCGGCCGCCAGGCCCATCGAGGCAGGCAGGGTCAGGACCCATGCCAGCAGGATGGTTTTCACAGTGCCGCCTTGCAGGCCACTTTTGT > NC_002947/1563722‑1564019 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |