| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,683,290 | C→G | 10.8% | intergenic (+57/‑174) | recJ → / → PP_1478 | ssDNA‑specific exonuclease RecJ/xenobiotic reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,683,290 | 0 | C | G | 10.8% | 298.9 / 24.1 | 102 | intergenic (+57/‑174) | recJ/PP_1478 | ssDNA‑specific exonuclease RecJ/xenobiotic reductase |
| Reads supporting (aligned to +/- strand): ref base C (48/43); new base G (5/6); total (53/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.54e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.11e-01 | |||||||||||
Only 100 of 106 total aligned reads displayed.
TGGGTGGAGTTGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCGGGCCGGATCACCA > NC_002947/1683144‑1683439 | tGGGTGGAGTTGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGccgc‑ccgc > 1:879946/1‑150 (MQ=255) gTTGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCt < 2:1428729/150‑1 (MQ=255) gTTGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCt > 1:1471066/1‑150 (MQ=255) ttGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTc < 2:1924108/150‑1 (MQ=255) ttGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATCGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGGTTGGGCACAAATCGAGCGCCGC‑GCGGGCGGCGCTc < 1:1354167/150‑1 (MQ=255) tGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCg > 1:501040/1‑150 (MQ=255) gTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑GCGGGCGGCGCTCGAttt < 2:1999695/150‑3 (MQ=255) aCAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTca < 2:969531/150‑1 (MQ=255) aCAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTca > 1:610704/1‑150 (MQ=255) cAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCgcggc > 1:857400/1‑138 (MQ=255) cAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCgcggc < 2:857400/138‑1 (MQ=255) cAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTcac > 1:1646553/1‑150 (MQ=255) aaGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTcaca < 1:1399342/150‑1 (MQ=255) aGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAg < 1:2109028/150‑1 (MQ=255) gCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAgg > 1:218832/1‑150 (MQ=255) tGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGgcg > 1:392310/1‑150 (MQ=255) gATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCt > 1:1803555/1‑150 (MQ=255) aaCGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAAc < 2:610704/150‑1 (MQ=255) aCGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTg > 2:2161703/1‑144 (MQ=255) aCGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTg > 1:1869517/1‑144 (MQ=255) aCGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTg < 1:2161703/144‑1 (MQ=255) aCGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTg < 2:1869517/144‑1 (MQ=255) aCGAGTTTCGCGGTAATGAGAGTGCGGTGATAATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAAcc > 1:652215/1‑150 (MQ=39) tttCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑Gcgggcg > 1:2153830/1‑117 (MQ=255) tttCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑Gcgggcg < 2:2153830/117‑1 (MQ=255) ttCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCgg < 1:323026/150‑1 (MQ=255) tCGCGGTAATGCGAGTGTCCAGTTTATGATTGCGCAAAGGTAGCCGCGCGGATTTTATCCTGAGGTGCCTGCCTTGGAGCTGGCGCTGGGGCCCAAATCGAGGGCCGC‑CCGCGAGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGc < 1:837377/150‑1 (MQ=25) aTGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCt > 2:1210554/1‑150 (MQ=255) tGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTc < 2:218832/150‑1 (MQ=255) gagaGTGTGCAGTTGATGATTGAGCATATGGAGACGCGCTGAGTTGAGCGTCATGTTCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCg > 2:2018787/1‑150 (MQ=39) gtgCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCAtac > 1:1559233/1‑148 (MQ=255) gtgCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATcc < 1:2295358/150‑1 (MQ=255) tgCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑GCGGGCGGCGCTCGa < 1:176357/106‑1 (MQ=255) aGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCcaca > 2:64641/1‑150 (MQ=255) gTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAg > 2:1461714/1‑110 (MQ=255) gTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAg < 1:1461714/110‑1 (MQ=255) ttGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGgc < 1:250769/111‑1 (MQ=255) ttGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGgc > 2:250769/1‑111 (MQ=255) ttGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTg > 2:1263660/1‑115 (MQ=255) ttGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTg < 1:1263660/115‑1 (MQ=255) ttGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCcac < 2:1161635/147‑1 (MQ=255) ttGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCcac > 1:1161635/1‑147 (MQ=255) gatgatTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGTATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAAcc > 2:1335704/1‑131 (MQ=255) gatgatTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAAcc < 1:1335704/131‑1 (MQ=255) atgatTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTc > 1:785791/1‑96 (MQ=255) atgatTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTc < 2:785791/96‑1 (MQ=255) ttGCGCATATGGAGCCGCGCTGAGTTTATCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTccc < 2:879946/150‑1 (MQ=255) gcATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTccccccc < 2:392310/150‑2 (MQ=255) gcATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCcca > 1:375121/1‑150 (MQ=255) aGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTg > 1:1784835/1‑150 (MQ=255) gcgcTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACTTTTCGGCGAACCCCt > 1:1894835/1‑113 (MQ=255) gcgcTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCt < 2:1894835/113‑1 (MQ=255) cgcTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTa > 1:458439/1‑150 (MQ=255) cTGAGTTTAGCGTCAGGTGCCTGTCTTGGATATTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTCTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGt < 1:291272/150‑1 (MQ=255) cTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGt < 2:1646553/150‑1 (MQ=255) tttAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCACGAGCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAt > 2:1035861/1‑150 (MQ=255) ctgaGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAt > 2:582610/4‑150 (MQ=255) ttAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAtt < 2:2290963/150‑1 (MQ=255) cGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATg > 2:1319188/1‑150 (MQ=255) gTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAGATCGAGCGCCGC‑GCGGGCGGCGCTCGAttt < 1:976249/67‑3 (MQ=18) tCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGtctc > 2:1428184/1‑141 (MQ=255) tCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGtctc < 1:1428184/141‑1 (MQ=255) gcAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCGCAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGAc < 2:440495/149‑1 (MQ=255) cAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGAGCTTTTGATTTCAGTG‑TTGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGAcc < 2:652215/150‑1 (MQ=255) gTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCg > 1:2183020/1‑148 (MQ=255) gTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCg < 2:2183020/148‑1 (MQ=255) cctgcctTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCAcc > 2:1034376/1‑150 (MQ=255) cctTGGATCTTGCGCTGGGGCACAAGTCGAGAGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGc > 2:151031/1‑150 (MQ=255) cctTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGc > 1:1025666/1‑150 (MQ=255) cctTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGc > 2:296349/1‑150 (MQ=255) ctTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGcc > 1:1927964/1‑150 (MQ=255) tCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCttt < 1:256087/68‑1 (MQ=255) tCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCttt > 2:256087/1‑68 (MQ=255) tCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCg > 2:689770/1‑70 (MQ=255) tCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCg < 1:689770/70‑1 (MQ=255) ttGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGAtgt < 1:2018787/150‑1 (MQ=255) gcTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAAc < 1:1884672/70‑1 (MQ=255) gcTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAAc > 2:1884672/1‑70 (MQ=255) gcTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAt < 2:1577174/119‑1 (MQ=255) gcTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAt > 1:1577174/1‑119 (MQ=255) gcTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGAAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCAc < 2:458439/150‑1 (MQ=255) tGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAGCCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACtt < 2:1471066/150‑1 (MQ=255) gggCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGa < 1:1319188/150‑1 (MQ=255) gCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCg < 2:2034124/128‑1 (MQ=255) gCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCGCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCg > 1:2034124/1‑128 (MQ=255) acaAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTc < 2:281144/102‑1 (MQ=255) acaAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTc > 1:281144/1‑102 (MQ=255) aaaTCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAt > 2:445840/1‑109 (MQ=255) aaaTCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCAt < 1:445840/109‑1 (MQ=255) gaTCGAGCGCCGC‑GCGGGCGGCGCTCGATTTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCg > 1:263488/2‑150 (MQ=255) aaTCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCg < 2:1927964/150‑1 (MQ=255) aaTCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCg > 1:66051/1‑150 (MQ=255) tCGAGCGCCGC‑GCGGGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCggg > 2:1377450/1‑150 (MQ=255) gAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCGGGcc > 2:906024/1‑150 (MQ=255) aGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGt < 1:1412945/98‑1 (MQ=255) aGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGt > 2:1412945/1‑98 (MQ=255) aGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCCCATTAATGAc < 2:713811/110‑1 (MQ=255) aGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCCCATTAATGAc > 1:713811/1‑110 (MQ=255) c‑ccgcGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGa < 2:923723/131‑1 (MQ=255) ccgcGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTAACAGGGCATCTACCCGCCGCACGGAACCCCCCTCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCGGGCCGGATCACCa > 1:635005/1‑150 (MQ=255) | TGGGTGGAGTTGGCGTACAAGCTGGATGTGAACGAGTTTCGCGGTAATGAGAGTGTGCAGTTGATGATTGCGCATATGGAGCCGCGCTGAGTTTAGCGTCAGGTGCCTGCCTTGGATCTTGCGCTGGGGCACAAATCGAGCGCCGC‑CCGCGCGGCGCTCGATCTCACAGGCGCTGCAAACCTTTCGGCGAACCCCTCGCCATCCCACAGAACCTCCCCCCACCAATCTGGTCTAGTCTCATTAATGACCGGCACCGGGCCAGGGATGTGCACTTGAGTGTCCGGGCCGGATCACCA > NC_002947/1683144‑1683439 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |