| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,822,232 | A→C | 6.6% | intergenic (+32/+26) | PP_mr22 → / ← fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,822,232 | 0 | A | C | 6.6% | 244.5 / 8.0 | 91 | intergenic (+32/+26) | PP_mr22/fdxA | PrrB_RsmZ ncRNA/ferredoxin 1 |
| Reads supporting (aligned to +/- strand): ref base A (46/38); new base C (3/3); total (49/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.65e-01 | |||||||||||
ATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGAAG > NC_002947/1822084‑1822381 | aTGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATTTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGAAAAACAAAAAAGGCCCGAAg > 1:2136881/1‑150 (MQ=255)aTGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAg > 1:1984213/1‑150 (MQ=255) acaGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGcc < 1:1303118/150‑1 (MQ=255) caGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCt > 1:472820/1‑150 (MQ=255) cTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCttttt < 1:1091525/150‑1 (MQ=255) gctGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc > 2:273193/3‑144 (MQ=255) gATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc < 1:273193/144‑1 (MQ=255) tGAAGGCCAGTGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc > 1:1086810/1‑142 (MQ=255) tGAAGGCCAGAGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTc < 2:1086810/142‑1 (MQ=255) aGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGGCTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgcg < 2:1126400/150‑1 (MQ=255) aGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgcg > 1:1401925/1‑150 (MQ=255) ggCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGGAAAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgcg > 1:202826/1‑150 (MQ=255) gCCAGGGACACCGAAAGGAGCGACCTCATCAGGATGATGTTGGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTCCCCGTGGGAAAACAAAAGAGGCCCGAAGGTCCTTCTTCGCGTTTGGGCGCt > 2:386523/1‑150 (MQ=255) cAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGCACAAGCAGGGACTATGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTAt < 2:1592796/150‑1 (MQ=255) ggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAg > 2:1171624/1‑150 (MQ=255) ggACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAg < 2:570750/150‑1 (MQ=255) aCATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAgcg > 1:976557/1‑150 (MQ=255) cATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAgcgc < 1:2317046/150‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTc < 2:2107556/150‑1 (MQ=255) tCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTc > 1:675870/1‑150 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttt > 1:895667/1‑115 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttt < 2:895667/115‑1 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCaa < 2:868771/150‑1 (MQ=255) gATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCaa < 1:2191057/150‑1 (MQ=255) tcatcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCtt < 1:1181608/150‑1 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGc > 1:1623218/1‑150 (MQ=255) atcaGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCGGAGCGCGAGCAGCGCTCCAGGTCGGCAATCTTGc > 2:1550433/1‑150 (MQ=255) ggATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTAAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAgg < 2:768062/150‑1 (MQ=255) gatgatGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgc > 1:179564/1‑115 (MQ=255) gatgatGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGgc < 2:179564/115‑1 (MQ=255) gatgatGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGc > 1:1444550/1‑150 (MQ=255) atgatgTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCt > 1:157208/1‑150 (MQ=255) tgatgTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt > 2:2019159/1‑150 (MQ=255) tgatgTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt < 2:1919557/150‑1 (MQ=255) atgTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAAAAGGGCAGGGCTGAAGTGCCTGTTTCGCGTCTGGGCGCTATCAGCACTCCAGTTCGGCAATCTTGCCAGGCTTGc > 1:1796439/1‑150 (MQ=255) tttGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttt < 1:1822730/97‑1 (MQ=255) tttGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCTTCGGGCCttttt > 2:1822730/1‑97 (MQ=255) tttGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCAt > 1:1464662/1‑150 (MQ=255) tttGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCAt > 1:2134822/1‑150 (MQ=255) ggACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCa < 1:1771583/150‑1 (MQ=255) ggACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATATGTTCTACAGGTCGGCAATCTTGCCAGGCTTGCCATCCCa > 1:1289990/1‑150 (MQ=255) aCAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACNGCCCCTNTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCTCGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt > 1:1537654/1‑150 (MQ=255) aCAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt < 2:675870/150‑1 (MQ=255) aCAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAtt > 2:2030714/1‑150 (MQ=255) cAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttc < 1:2030714/150‑1 (MQ=255) gCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCAttcttc > 2:1326254/1‑150 (MQ=255) cAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCGCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCa < 1:386523/150‑1 (MQ=255) gggACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATATTGACAGGCTTGCCATCCACTTCTTAAGc > 1:2232508/1‑150 (MQ=255) cTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTcc < 2:157208/150‑1 (MQ=255) cGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGc > 2:341915/1‑150 (MQ=255) g‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCg > 1:2025261/1‑146 (MQ=255) g‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCg < 2:2025261/146‑1 (MQ=255) aaaaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAgg < 2:472820/150‑1 (MQ=255) aaaaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAgg < 1:2019159/150‑1 (MQ=255) aaaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa > 1:189235/1‑91 (MQ=255) aaaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCa < 2:189235/91‑1 (MQ=255) aaaaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGc < 1:1326254/150‑1 (MQ=255) aaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGt > 1:170405/1‑150 (MQ=255) aaaTGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGt > 2:400631/1‑150 (MQ=255) ggCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCCTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACg > 1:1579551/1‑150 (MQ=255) gTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCgg < 1:400631/150‑1 (MQ=255) aaaCCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGa < 1:1550433/150‑1 (MQ=255) aaCCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGat > 1:1262459/1‑150 (MQ=255) aCCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGata < 2:170405/150‑1 (MQ=255) ccGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAg < 2:420982/127‑1 (MQ=255) ccGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAg > 1:420982/1‑127 (MQ=255) ccccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTTGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg > 1:1904649/1‑150 (MQ=255) ccccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCGGGCAGGGCGTCCTTACGCTCGGTGATATTAg > 1:981185/1‑150 (MQ=255) ccccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg > 1:1714828/1‑150 (MQ=255) ccccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAg > 2:352221/1‑150 (MQ=255) cccTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAgg < 1:352221/150‑1 (MQ=255) cTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGcc < 2:191965/150‑1 (MQ=255) gCCCGTAGGAAAACAAAAAAGGCCAGATGCTCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTcc < 1:1171624/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:1714828/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:1984213/150‑1 (MQ=255) ccGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGc < 2:1444550/150‑1 (MQ=255) cGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGcc > 2:1726849/1‑150 (MQ=255) aaCAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGc > 2:50418/1‑150 (MQ=255) gcgaaaaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt < 2:2119770/71‑1 (MQ=25) gcgaaaaaGGCCCTTCGGGCCTTTTTTGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCtt > 1:2119770/4‑74 (MQ=25) aCAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCg < 2:1425898/150‑1 (MQ=255) aaaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGt > 1:1707461/1‑117 (MQ=255) aaaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGt < 2:1707461/117‑1 (MQ=255) aaaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGtt > 1:233667/1‑150 (MQ=255) aaaaaaGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGtt > 2:487854/1‑150 (MQ=255) cccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGa < 2:1518244/150‑1 (MQ=255) cccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGa > 2:1898130/1‑150 (MQ=255) ccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCAGCCAGATAGGAGATAAGCTCGAt > 2:1297605/1‑150 (MQ=255) ccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTACTTACGCTCGGTGATATCAGGCCAGATTTCCg > 1:827172/1‑128 (MQ=255) ccGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTACTTACGCTCGGTGATATCAGGCCAGATTTCCg < 2:827172/128‑1 (MQ=255) gAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGa > 1:1223107/1‑150 (MQ=255) aGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGAAg < 2:2136881/150‑1 (MQ=255) | ATGCACAGGCTTTCAGGATGAAGGCCAGGGACATCGCAAGAAGCGATTTCATCAGGATGATGTTTGGGACAAGCAGGGACTACGG‑AAAAAAATGTGGGCGGGTCAAACCGCCCCTTTTTTTGCCCGTAGGAAAACAAAAAAGGCCCGAAGGGCCTTTTTCGCGTCTGGGCGCTATCAGCGCTCCAGGTCGGCAATCTTGCCAGGCTTGCCATCCCATTCTTCAGCGTCCGGCAGGGCGTCCTTACGCTCGGTGATATTAGGCCAGATTTCCGCCAGCTCGGCGTTCAGCTCGATGAAG > NC_002947/1822084‑1822381 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |