| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,974,807 | G→T | 5.5% | Q258H (CAG→CAT) | serC → | 3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,974,807 | 0 | G | T | 5.5% | 261.9 / 2.4 | 83 | Q258H (CAG→CAT) | serC | 3‑phosphoserine/phosphohydroxythreonine aminotransferase |
| Reads supporting (aligned to +/- strand): ref base G (43/35); new base T (3/2); total (46/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.97e-01 | |||||||||||
CGCGAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTGGCTGACGAGC > NC_002947/1974661‑1974952 | cgcgAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑Gc < 1:964507/150‑1 (MQ=255) gcgAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACGACAAGGTTTCGGCGGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCg > 2:1255749/1‑150 (MQ=255) gAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTATCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑ATG‑GCGgt > 2:1912397/1‑150 (MQ=255) aCCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCg < 2:2170879/150‑1 (MQ=255) cTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAg < 2:1712121/150‑1 (MQ=255) gTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACACGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCCGAAAGAGC‑GGT‑GCGGTGTCGAGGc > 2:988707/1‑150 (MQ=255) gggCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCAt < 2:1879683/150‑1 (MQ=255) gCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATgg > 2:1231970/1‑150 (MQ=255) ccGCAGCAGCTGCCCGACCATGCTCGACTGCAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAgcg > 1:2204362/1‑150 (MQ=255) gcagcaGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCa > 2:485761/1‑150 (MQ=255) cagcTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCg < 1:551267/150‑1 (MQ=255) ccGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCaag > 1:2113649/1‑150 (MQ=255) ccGACCATGCTCGACTACAAGGATTGGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGACaaa > 2:269041/1‑149 (MQ=255) cATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCg < 1:32873/110‑1 (MQ=255) cATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCg > 2:32873/1‑110 (MQ=255) tGCTCGACTACAAGGTTTCGGCTGCCCCCGCCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTCGTCTTCGAGTCGCTGATGCAAG‑TGGTGCACTGGC‑AGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGAcc < 1:988707/150‑1 (MQ=255) gCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACGCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGAACTTACGCCATGGAGCAGCGCCACCGTGCCAAGAAAGACCg > 1:1290019/1‑150 (MQ=255) tCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTTGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGAGTCGAGGCCATGGAGCAGCGCAACCGTGCAAAGAAAGACAGcc > 2:963682/1‑150 (MQ=255) cTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCCCGGCAAGCGTGCCAAGAAAGACCGCCTTTa > 1:1165/1‑150 (MQ=255) aCAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACg < 1:1231970/150‑1 (MQ=255) cAAGGTTTCGGCTGACAACGGCTCGATGGACAACAGCACGGCCACCTACTCCTGGTACCTCTCTGGCATGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTAAgg > 1:904938/1‑150 (MQ=255) aaGGTTTCGGCTGACAACGGCTCGATGTACCACACCCTAGCCACCGACGCCGGGTACCTCTCTGGCCTGGCGTTCGACAAGCTG‑CTGATCGATG‑CCATTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGc > 1:1695005/1‑150 (MQ=255) aaGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGc > 2:637898/1‑150 (MQ=255) aaGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGc > 1:992810/1‑150 (MQ=255) aaGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAAACCGCCTTTACGGc > 2:2270889/1‑150 (MQ=255) ggTTTAGCCTGACAACGGGTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCtt < 2:722274/150‑1 (MQ=255) gTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGCGA‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTc > 2:1483641/1‑150 (MQ=255) tttCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCa < 2:1771769/105‑1 (MQ=255) tttCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCa > 1:1771769/1‑105 (MQ=255) ttCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCAt < 2:1412022/150‑1 (MQ=255) ttCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCAt < 2:992810/150‑1 (MQ=255) ggCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGa > 2:339028/1‑150 (MQ=255) gCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGAc < 2:2113649/150‑1 (MQ=255) tGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCaa < 2:1399068/120‑1 (MQ=255) tGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCaa > 1:1399068/1‑120 (MQ=255) aaCGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGc > 2:1079749/1‑150 (MQ=255) cGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGa < 1:339028/150‑1 (MQ=255) aTGTACAACACCCCGGCCACCTACTCCTGGTATCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑ATG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTac < 1:1912397/150‑1 (MQ=255) aTGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTa < 2:1315998/149‑1 (MQ=255) aTGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTa > 1:1315998/1‑149 (MQ=255) tGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAgg > 1:1266847/1‑81 (MQ=255) tGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAgg < 2:1266847/81‑1 (MQ=255) caacaCCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCaa < 1:637898/150‑1 (MQ=255) aacaCCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTTCGGTTTCATCGACCGCACCGAGTTCTACACCAAc < 2:904938/150‑1 (MQ=255) cccGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATgg < 2:287613/77‑1 (MQ=255) cccGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATgg > 1:287613/1‑77 (MQ=255) cGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGtt > 1:1522973/1‑133 (MQ=255) cGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGtt < 2:1522973/133‑1 (MQ=255) cACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACGCCAACCCGATCAGCGt < 1:485761/150‑1 (MQ=255) ccTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGc < 1:1402683/122‑1 (MQ=255) ccTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGc > 2:1402683/1‑122 (MQ=255) tACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAAc > 2:1148805/1‑150 (MQ=255) cTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTg > 1:1011979/1‑80 (MQ=255) cTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTg < 2:1011979/80‑1 (MQ=255) cTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGATCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCg > 2:546371/1‑150 (MQ=255) cTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGCTCTACACCAACCCGATCAGCGTCAACGCCCg > 1:1752659/1‑150 (MQ=255) tGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGCCGCCATGGACCGCAGCGGGTTCTACACCAACCAGATCAGCGTCAACGCCCGt > 1:733662/1‑150 (MQ=255) ggTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑ATG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAg < 2:1774855/116‑1 (MQ=255) ggTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑ATG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAg > 1:1774855/1‑116 (MQ=255) gTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTc > 1:227351/1‑150 (MQ=255) ccTCTCTGGCCTGGTCTTCGAGTGGGTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCACCTTTACGGATTAATCAACCGCAGCGAGTTCTACACCCCCCCGATCAGCGTCAACGCCCGCTCGTg > 2:249215/1‑150 (MQ=255) ccTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTg < 1:1255749/150‑1 (MQ=255) ccTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTg < 1:269041/150‑1 (MQ=255) ctctGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGCGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGAt > 2:547617/1‑150 (MQ=255) tctGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATg > 2:1453610/1‑150 (MQ=255) gCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAAcc < 1:566388/117‑1 (MQ=255) gCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAAcc > 2:566388/1‑117 (MQ=255) gCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACg > 2:2119206/1‑150 (MQ=255) cTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCCACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTg < 2:1290019/150‑1 (MQ=255) cTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCaa > 2:1804738/1‑113 (MQ=255) cTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCaa < 1:1804738/113‑1 (MQ=255) tGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAACACCGCCTTTACGGCTCCATCGACCGCAGCGAGTTCTACACCAACCCGATCCGCGTCAACGCCCGTTCGTGGATGCACGTGc > 2:102632/1‑150 (MQ=255) tCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTcc < 2:227351/150‑1 (MQ=255) gTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCt > 1:349468/1‑150 (MQ=255) ggCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGCCAATCCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTgg < 1:23832/150‑1 (MQ=255) ggCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTgg < 1:465162/150‑1 (MQ=255) tGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACAGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTGGCTg > 2:2086574/1‑150 (MQ=255) aaaGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTGGCTGAc > 2:86188/1‑150 (MQ=255) aaGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCt < 2:1904728/142‑1 (MQ=255) aaGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCt > 1:1904728/1‑142 (MQ=255) agagC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAAc > 2:1251924/1‑127 (MQ=255) agagC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAAc < 1:1251924/127‑1 (MQ=255) agC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTGGCTGACGAgc < 1:698680/150‑1 (MQ=255) | CGCGAAGACCTGTTGGGCCATGCCCGCAGCAGCTGCCCGACCATGCTCGACTACAAGGTTTCGGCTGACAACGGCTCGATGTACAACACCCCGGCCACCTACTCCTGGTACCTCTCTGGCCTGGTCTTCGAGTGGCTGAAAGAGC‑AGG‑GCGGTGTCGAGGCCATGGAGCAGCGCAACCGTGCCAAGAAAGACCGCCTTTACGGCTTCATCGACCGCAGCGAGTTCTACACCAACCCGATCAGCGTCAACGCCCGTTCGTGGATGAACGTGCCGTTCCGCCTGGCTGACGAGC > NC_002947/1974661‑1974952 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |