| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,078,282 | T→C | 5.2% | intergenic (+24/+91) | PP_1853 → / ← PP_1854 | LysR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,078,282 | 0 | T | C | 5.2% | 227.6 / 2.3 | 80 | intergenic (+24/+91) | PP_1853/PP_1854 | LysR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (39/35); new base C (2/2); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.12e-01 | |||||||||||
GCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACC > NC_002947/2078137‑2078430 | gCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGACCTTTTcg > 2:1065927/1‑150 (MQ=255) ccTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTcgc < 1:349994/150‑1 (MQ=255) cTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTcgc < 1:244459/149‑1 (MQ=255) cTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTcgc > 2:244459/1‑149 (MQ=255) gTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCggg > 2:514340/1‑150 (MQ=255) ttCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGgcccg > 1:718290/1‑150 (MQ=255) ccGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGcccgcccg > 1:390368/1‑150 (MQ=255) caAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCTCCAGCAcccgc > 1:647045/1‑148 (MQ=255) aggCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCcaca > 2:581827/3‑150 (MQ=255) aaGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCCCCccca > 1:1906958/1‑150 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGa < 2:390368/150‑1 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCAGCCCGCACCCACAGGGa < 2:87098/150‑1 (MQ=255) tGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTCTCGCGGGCCCGCCCGCTCCCACAAGGa > 1:1160309/1‑150 (MQ=255) ccGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGACTTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATca < 2:331822/150‑1 (MQ=255) cGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATcac > 2:915029/1‑150 (MQ=255) gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAgg < 1:1960865/141‑1 (MQ=255) gggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAgg > 2:1960865/1‑141 (MQ=255) ggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGACAAATACGGAGTTCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCCCAg > 2:652851/1‑150 (MQ=255) ggCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAg < 1:878215/150‑1 (MQ=255) aGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGACCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCTCTCGCACCCACAGGGATATCACAGCCCt < 1:652851/150‑1 (MQ=255) ccGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCCCCCACAGGGTCATTACAGCCCTGGAg > 1:2001485/1‑150 (MQ=255) gggCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGATGACGAAGCGGTTCCATACCCTCCGGGCGGTTTAGAGAAGTATAACCTGAGCCGGCCGTTTGGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGAc > 2:2015951/1‑150 (MQ=255) gttgactgATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCTGTTCGATGCCCTGCAGGCCCTTTCGAGCATAATTGCTCCCGCCGGCCTATTCGAGTTGCGTCCCGCACCTGCAGCTATAGGTCAGCCCTGAGGACtgtg < 2:1779547/143‑1 (MQ=255) gTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGTTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCCCGGGCCCATCCCCCCCCCCATGGATATCGCAGCCCTGAAGACAGTg > 2:1673858/1‑150 (MQ=255) ttCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTACGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTgg < 2:765615/150‑1 (MQ=255) tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggg < 2:1479266/150‑1 (MQ=255) tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg > 1:656070/1‑148 (MQ=255) tCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTg < 2:656070/148‑1 (MQ=255) aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGatat < 1:471327/127‑1 (MQ=255) aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGatat > 2:471327/1‑127 (MQ=255) aTCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTggggg > 1:1882444/1‑149 (MQ=255) tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGGCGGCGCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACGGTGGGGTc < 2:326035/150‑1 (MQ=255) tCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTc > 2:2106242/1‑150 (MQ=255) cgctttcGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGGGGGGTcc > 2:2328698/4‑150 (MQ=255) aTTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCtt < 2:718290/150‑1 (MQ=255) tttGTGGTGGAGCAGTTTGCCGACCAGGCTCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGCGACTGATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTtgt < 1:514340/150‑1 (MQ=255) tgtgGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg < 1:581827/150‑1 (MQ=255) agcaactgctgggcaagcgggtggatgacgaggtgcacctgggcgcaaaggtatcgttcattgtcgatgttgtctgaaCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGa < 1:1640106‑M1/72‑1 (MQ=255) actgctgggcaagcgggtggatgacgaggtgcacctgggcgcacaggtatcgttcattgtcgatgttgcctgtgCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgg > 2:1883927‑M1/75‑150 (MQ=255) actgctgggcaagcgggtggatgacgaggtgcacctgggcgcaaaggtatcgttcattgtcgatgttgtctgaaCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgg > 2:1640106‑M1/75‑150 (MQ=255) ctgggcaagcgggtggatgacgagttgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg > 2:988514‑M1/71‑150 (MQ=255) cAGCTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCCGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCTGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggcgg < 1:1424230/150‑1 (MQ=255) gTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGACCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCgggcgggc < 1:1065927/150‑1 (MQ=255) tttGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACACCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGcc > 2:53062/1‑150 (MQ=255) tGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTCGATAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCcg < 1:1892975/150‑1 (MQ=255) cGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTACTTGTGGGAGGGGGCGGGGCCGCGa > 1:2163113/1‑150 (MQ=255) ggggCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCCCACTCACAGGGATACCACAGCCCTGAAGACAGTGGGGACGCAACTGCAGCGGGCGGGCCCGCGAAGAGGc < 1:1230258/150‑1 (MQ=255) ggCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg < 2:129893/124‑1 (MQ=255) ggCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTgg > 1:129893/1‑124 (MQ=255) tGGCGGGCTTGTGCGATGCTCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGCAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGtt < 2:1333559/150‑1 (MQ=255) ggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaCCGGCCTCTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc < 2:2314968‑M1/78‑1 (MQ=255) ggtgcacctgggcgcacaggtatcgttcattgtcgatgttgtctgaaCCGGCCTCTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc > 1:2314968‑M1/48‑125 (MQ=255) acctgggcgcacaggtatcgttcattgtcgatgttgtctgaaCCGGCCTCTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc < 2:1883126‑M1/78‑1 (MQ=255) acctgggcgcacaggtatcgttcattgtcgatgttgtctgaaCCGGCCTCTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc > 1:1883126‑M1/43‑120 (MQ=255) ttCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATCACAGGACCCTGAAGACAGTGGGGTCGTTGTGGGAGCGGGCGGGCCCCCGCAGAGACAGGTTCTGACAACATc > 1:736009/1‑150 (MQ=255) gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGAc > 2:894074/1‑150 (MQ=255) gATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGAAATCACCGCCCTGAAGACAGTGGGGTACTTGTGGGCGCCGGCGGGCCCGCGAAGAGGCCGGGTCAGGCAACCTCGAc > 1:583533/1‑150 (MQ=255) ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTgg > 1:1366701/1‑91 (MQ=255) ccTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTgg < 2:1366701/91‑1 (MQ=255) cTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc > 2:874061/1‑109 (MQ=255) cTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAgcgggc < 1:874061/109‑1 (MQ=255) cTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGaa < 1:2106242/150‑1 (MQ=255) ggCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGcca < 2:2146511/131‑1 (MQ=255) ggCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGaca > 1:2146511/1‑131 (MQ=255) tcccTTTAGAGAATGGTTGCGTGTGTCGGCTTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATAc < 1:1865761/149‑1 (MQ=255) gCCTTTTAGAGAAGTTTTGCCTGTGCCGGCTGTTGCGCGGGCCCGCCGCCCCCCCCGGGGATATCACCGCCCTGAAGATAGTGGGGTTCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATAc < 1:1673858/150‑1 (MQ=255) cTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCt < 1:2163957/70‑1 (MQ=255) cTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCt > 2:2163957/1‑70 (MQ=255) tttAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCTGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCtgt < 1:915029/150‑1 (MQ=255) agaATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGGCCTGAAGACAGCGGGGTCCTTGTGGGAGCAGGCGGGCCCGCGAAGCGGCCGGTTCAGACAACATCGCCAATGAACGATACCTGTgccgc > 2:156369/1‑147 (MQ=255) ttattGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCCCCCCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCCATTCAGACCGCAACGACAACGGTCGAATCCTGGGCGTCCatt > 2:1668631/1‑148 (MQ=255) ttGCCTGTGCCGGCCTGGTGGCGGGCCCGCCCGCACCCACAGGGAGATCACAGCCCTGAAGACGGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACTATGAACTATACCTGTGCGCCCAGGTGc < 1:53062/150‑1 (MQ=255) tgtgCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTc > 2:1264124/1‑150 (MQ=255) tgtgCCGGCCTTTGCGCGGGCCCGACCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTc < 2:647045/150‑1 (MQ=255) gtgCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCg < 1:894074/150‑1 (MQ=255) gCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTc < 2:736009/150‑1 (MQ=255) gCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCGGAAGACAGGGGGGGCCCTGTGGGAGCGGGCCGGCCCGCGCAGAGGCCGGTTCAGACACCCTGGACCATGGACGATACCTGTGCGCCCAGGTGCACCTCGTc > 2:854964/1‑150 (MQ=255) CTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCCTAGACAAGCCGGTTCAGACAACATCGACAATGACAGATCACTGTGAGCCCAGGCGCACCGTGTCATCCAc < 1:987055‑M1/150‑1 (MQ=255) CTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCATGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCAc > 2:1906958‑M1/1‑150 (MQ=255) TTTTCCCGGCCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACCGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCAcc > 2:987055‑M1/1‑150 (MQ=255) | GCCTGTATTTCGCCGAGCACAAGCTGTTGCCGGGCAAGACCCGGGCGTTCATCGATTTTGTGGTGGAGCAGTTTGCCGAGCAGGGGCTGGCGGGGCGGTTCGATGCCCTGCAGGCCCTTTAGAGAATTATTGCCTGTGCCGGCCTTTTCGCGGGCCCGCCCGCACCCACAGGGATATCACAGCCCTGAAGACAGTGGGGTCCTTGTGGGAGCGGGCGGGCCCGCGAAGAGGCCGGTTCAGACAACATCGACAATGAACGATACCTGTGCGCCCAGGTGCACCTCGTCATCCACC > NC_002947/2078137‑2078430 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |