Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,107,226 G→T 5.3% intergenic (‑67/+122) PP_1880 ← / ← PP_1881 outer membrane autotransporter/hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,107,2260GT 5.3% 236.1 / 2.1 75intergenic (‑67/+122)PP_1880/PP_1881outer membrane autotransporter/hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (30/41);  new base T (2/2);  total (32/43)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.48e-01

AAAAACAACGGGCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTGGCTCACGTCACACGA  >  NC_002947/2107083‑2107371
                                                                                                                                               |                                                                                                                                                 
aaaaaCAACGGGCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATAcc                                                                                                                                             <  1:769711/150‑1 (MQ=255)
   aacaacGGGCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCACACcgcg                                                                                                                                          >  2:1768965/1‑150 (MQ=255)
      aacGGGCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAgg                                                                                                                                       <  1:1004553/150‑1 (MQ=255)
        cGGGCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCt                                                                                                                                     >  2:907083/1‑150 (MQ=255)
         gggCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCTCATACCGCGAGGCTa                                                                                                                                    >  2:708802/1‑150 (MQ=255)
          ggCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTaa                                                                                                                                   <  2:2222544/150‑1 (MQ=255)
           gCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAg                                                                                                                                  >  1:479768/1‑150 (MQ=255)
                 cAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGtt                                                                                                                            <  1:1567152/150‑1 (MQ=255)
                 cAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGtt                                                                                                                            <  1:2310131/150‑1 (MQ=255)
                    cACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGATAAGCGCGtgatg                                                                                                                         <  2:580873/150‑5 (MQ=255)
                      cGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTc                                                                                                                       <  2:1351594/150‑1 (MQ=255)
                      cGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTc                                                                                                                       <  1:949189/150‑1 (MQ=255)
                              gCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGa                                                                                                                                         <  2:924685/124‑1 (MQ=255)
                              gCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGa                                                                                                                                         >  1:924685/1‑124 (MQ=255)
                              gCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCaaaaaa                                                                                                               >  1:2139909/1‑150 (MQ=255)
                              gCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCaaaaaa                                                                                                               <  1:528554/150‑1 (MQ=255)
                                gggTGTTGAAGAGGGGGGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATCCCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATg                                                                                                             <  2:471582/150‑1 (MQ=255)
                                gggTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATg                                                                                                             >  1:1173804/1‑150 (MQ=255)
                                  gtgtTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGt                                                                                                                             >  1:975808/1‑132 (MQ=255)
                                  gtgtTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGt                                                                                                                             <  2:975808/132‑1 (MQ=255)
                                     ttGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAgg                                                                                                        >  1:72975/1‑150 (MQ=255)
                                       gAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGtt                                                                                                                            <  2:750290/128‑1 (MQ=255)
                                       gAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGtt                                                                                                                            >  1:750290/1‑128 (MQ=255)
                                        aaCAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCATGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGGGCGCTAAGTCGCAAAAAAGGTAAGGaga                                                                                                     <  2:470488/150‑3 (MQ=255)
                                          cAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCTCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAAtt                                                                                                   >  1:604281/1‑150 (MQ=255)
                                          cAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAAtt                                                                                                   >  2:1668077/1‑150 (MQ=255)
                                             tGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCt                                                                                                >  1:1630816/1‑150 (MQ=255)
                                              ggagacgggCGTGCACTAGGCGACTGCGTACTCAGGGAAAGCCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTa                                                                                               <  2:1667015/144‑1 (MQ=255)
                                              ggCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCTCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTa                                                                                               <  1:708802/150‑1 (MQ=255)
                                                   aGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGGTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCtt                                                                                          <  2:2074516/150‑1 (MQ=255)
                                                    gggCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTCAGGCGCAAAAAATGTAAGGAAATTCCTACTCTTc                                                                                         <  1:1355264/150‑1 (MQ=255)
                                                       cGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGTAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAAt                                                                                      <  2:1833944/150‑1 (MQ=255)
                                                       cGTGAAAAAGGCCGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAAt                                                                                      <  1:780317/150‑1 (MQ=255)
                                                        gTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATg                                                                                     <  1:349317/150‑1 (MQ=255)
                                                             aaaGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGTaaaa                                                                                <  2:1630816/150‑1 (MQ=255)
                                                                ggcggcTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCTCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTc                                                                             <  2:604281/150‑1 (MQ=255)
                                                                     cTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCtata                                                                        <  1:1668077/150‑1 (MQ=255)
                                                                      tCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATaa                                                                       >  1:73345/1‑150 (MQ=255)
                                                                      tCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATaa                                                                       >  2:2104268/1‑150 (MQ=255)
                                                                        ggCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGt                                                                     <  1:907083/150‑1 (MQ=255)
                                                                            tgcaaggAAAACATCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGTATACCGCGAGGCTAAGAGAAAAAAAAAAAAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGAt                                                                 <  2:1841214/145‑1 (MQ=255)
                                                                                      aCCTCGAAGTGAACAAATTTTTTTAAGAACGTTCTGCTTTTCTCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGa                                                       <  1:445744/150‑1 (MQ=255)
                                                                                                 aaCAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCaaa                                            >  1:1888972/1‑150 (MQ=255)
                                                                                                 aaCAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAAAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCaaa                                            >  2:82183/1‑150 (MQ=255)
                                                                                                   cAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAACAATGTAAAGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGc                                          >  1:2155540/1‑150 (MQ=255)
                                                                                                    aaaTTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGt                                                                     >  2:609907/1‑122 (MQ=255)
                                                                                                    aaaTTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGt                                                                     <  1:609907/122‑1 (MQ=255)
                                                                                                    aaaTTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGcc                                         <  2:2139909/150‑1 (MQ=255)
                                                                                                         tttGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGTCAGCGGACGATTGCCAAAGCCGCTGc                                    <  2:854191/150‑1 (MQ=255)
                                                                                                         tttGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGc                                    <  2:1173804/150‑1 (MQ=255)
                                                                                                             tAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAg                                >  1:1831756/1‑150 (MQ=255)
                                                                                                                gACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCtt                                                                                          >  1:1956741/1‑89 (MQ=255)
                                                                                                                gACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCtt                                                                                          <  2:1956741/89‑1 (MQ=255)
                                                                                                                gACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAg                                <  2:741661/147‑1 (MQ=255)
                                                                                                                gACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAg                                >  1:741661/1‑147 (MQ=255)
                                                                                                                gACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCt                             >  1:1800704/1‑150 (MQ=255)
                                                                                                                 aCCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCtt                            >  2:917463/1‑150 (MQ=255)
                                                                                                                 aCCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCtt                            >  1:1944522/1‑150 (MQ=255)
                                                                                                                   cGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTa                                                                                               <  2:478380/81‑1 (MQ=255)
                                                                                                                   cGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTa                                                                                               >  1:478380/1‑81 (MQ=255)
                                                                                                                       cTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGa                                 <  2:1372748/139‑1 (MQ=255)
                                                                                                                       cTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGa                                 >  1:1372748/1‑139 (MQ=255)
                                                                                                                             ttCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTgg                <  2:1800704/150‑1 (MQ=255)
                                                                                                                             ttCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTgg                <  2:1831756/150‑1 (MQ=255)
                                                                                                                                gCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTGGCTc             <  2:1888972/150‑1 (MQ=255)
                                                                                                                                  tGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAACATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGc                          >  1:632419/1‑135 (MQ=255)
                                                                                                                                  tGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGc                          <  2:632419/135‑1 (MQ=255)
                                                                                                                                  tGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTGGCTCAc           <  2:1466607/150‑1 (MQ=255)
                                                                                                                                         cAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCgg                                                              <  2:1908986/92‑1 (MQ=255)
                                                                                                                                         cAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCgg                                                              >  1:1908986/1‑92 (MQ=255)
                                                                                                                                          aaTCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAgg                               >  2:1266969/1‑122 (MQ=255)
                                                                                                                                          aaTCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAgg                               <  1:1266969/122‑1 (MQ=255)
                                                                                                                                           aTCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTGGCTCACGTCACACGa  >  1:428905/1‑150 (MQ=255)
                                                                                                                                            tCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTg                 >  2:2163853/1‑134 (MQ=255)
                                                                                                                                            tCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTg                 <  1:2163853/134‑1 (MQ=255)
                                                                                                                                               |                                                                                                                                                 
AAAAACAACGGGCCCGCCAGCACGAGATGAGCGGGTGTTGAACAGTGGCGAAGGGCGTGAAAAAGGCGGCTCGGCATTCAGGGAAAACCTCGAAGTGAACAAATTTTTGTAAGACCGTTCTGCTTTTCGCTGGAGAACAATCCGCATACCGCGAGGCTAAGCGCGTTAAGTCGCAAAAAATGTAAGGAAATTCCTACTCTTCAATGGAAAATTCCTATAAGTGGATCGGCAGCGGACGATTGCCAAAGCCGCTGCCGAGGCTTGCTCAAGGTTGGCTCACGTCACACGA  >  NC_002947/2107083‑2107371

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑